RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 CTCFLQ8NI51 663 aaPredicted RBP11.98□□□□□ -0.49
RFC1-210ENST00000505077 ACER1Q8TDN7 264 aa11.98□□□□□ -0.49
RFC1-210ENST00000505077 LZTS2Q9BRK4 669 aa11.98□□□□□ -0.49
RFC1-210ENST00000505077 RBM28Q9NW13 759 aaKnown RBP11.98□□□□□ -0.49
RFC1-210ENST00000505077 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.98□□□□□ -0.49
RFC1-210ENST00000505077 CIZ1Q9ULV3 898 aaPredicted RBP11.98□□□□□ -0.49
RFC1-210ENST00000505077 NDUFB10O96000 172 aa11.97□□□□□ -0.49
RFC1-210ENST00000505077 PARP1P09874 1014 aaKnown RBP11.97□□□□□ -0.49
RFC1-210ENST00000505077 PDHBP11177 359 aa11.97□□□□□ -0.49
RFC1-210ENST00000505077 CETPP11597 493 aa11.97□□□□□ -0.49
RFC1-210ENST00000505077 VCAM1P19320 739 aa11.97□□□□□ -0.49
RFC1-210ENST00000505077 SLC1A4P43007 532 aa11.97□□□□□ -0.49
RFC1-210ENST00000505077 GNAQP50148 359 aa11.97□□□□□ -0.49
RFC1-210ENST00000505077 APOBRQ0VD83 1088 aa11.97□□□□□ -0.49
RFC1-210ENST00000505077 GRM4Q14833 912 aa11.97□□□□□ -0.49
RFC1-210ENST00000505077 SLFN13Q68D06 897 aa11.97□□□□□ -0.49
RFC1-210ENST00000505077 MICU3Q86XE3 530 aa11.97□□□□□ -0.49
RFC1-210ENST00000505077 REM2Q8IYK8 340 aaPredicted RBP11.97□□□□□ -0.49
RFC1-210ENST00000505077 ZCCHC17Q9NP64 241 aaKnown RBP11.97□□□□□ -0.49
RFC1-210ENST00000505077 GPHNQ9NQX3 736 aaPredicted RBP11.97□□□□□ -0.49
RFC1-210ENST00000505077 BRPF3Q9ULD4 1205 aa11.97□□□□□ -0.49
RFC1-210ENST00000505077 SLC45A1Q9Y2W3 748 aa11.97□□□□□ -0.49
RFC1-210ENST00000505077 SMCHD1A6NHR9 2005 aa11.97□□□□□ -0.49
RFC1-210ENST00000505077 MYPNQ86TC9 1320 aa11.96□□□□□ -0.49
RFC1-210ENST00000505077 MANSC4A6NHS7 340 aaPredicted RBP11.96□□□□□ -0.49
RFC1-210ENST00000505077 PLA2G6O60733 806 aa11.96□□□□□ -0.49
RFC1-210ENST00000505077 PFKFB2O60825 505 aa11.96□□□□□ -0.49
RFC1-210ENST00000505077 SMARCA1P28370 1054 aa11.96□□□□□ -0.49
RFC1-210ENST00000505077 PDIA3P30101 505 aaKnown RBP11.96□□□□□ -0.49
RFC1-210ENST00000505077 ANP32AP39687 249 aaKnown RBP11.96□□□□□ -0.49
RFC1-210ENST00000505077 METAP2P50579 478 aaKnown RBP eCLIP11.96□□□□□ -0.49
RFC1-210ENST00000505077 HMGCS2P54868 508 aa11.96□□□□□ -0.49
RFC1-210ENST00000505077 INHBEP58166 350 aa11.96□□□□□ -0.49
RFC1-210ENST00000505077 ZNF543Q08ER8 600 aa11.96□□□□□ -0.49
RFC1-210ENST00000505077 NOGQ13253 232 aa11.96□□□□□ -0.49
RFC1-210ENST00000505077 PABPC4Q13310 644 aaKnown RBP eCLIP11.96□□□□□ -0.49
RFC1-210ENST00000505077 CPLX2Q6PUV4 134 aaKnown RBP11.96□□□□□ -0.49
RFC1-210ENST00000505077 CCDC84Q86UT8 332 aaPredicted RBP11.96□□□□□ -0.49
RFC1-210ENST00000505077 HSCBQ8IWL3 235 aa11.96□□□□□ -0.49
RFC1-210ENST00000505077 SENP2Q9HC62 589 aa11.96□□□□□ -0.49
RFC1-210ENST00000505077 TPCN1Q9ULQ1 816 aa11.96□□□□□ -0.49
RFC1-210ENST00000505077 ZNFX1Q9P2E3 1918 aaKnown RBP11.96□□□□□ -0.5
RFC1-210ENST00000505077 GOLGA8AA7E2F4 631 aa11.95□□□□□ -0.5
RFC1-210ENST00000505077 FAM155AB1AL88 458 aaPredicted RBP11.95□□□□□ -0.5
RFC1-210ENST00000505077 CDKL5O76039 1030 aa11.95□□□□□ -0.5
RFC1-210ENST00000505077 BMP3P12645 472 aa11.95□□□□□ -0.5
RFC1-210ENST00000505077 GJA5P36382 358 aa11.95□□□□□ -0.5
RFC1-210ENST00000505077 STAT2P52630 851 aa11.95□□□□□ -0.5
RFC1-210ENST00000505077 SREBF2Q12772 1141 aa11.95□□□□□ -0.5
RFC1-210ENST00000505077 BECN1Q14457 450 aa11.95□□□□□ -0.5
RFC1-210ENST00000505077 RTN1Q16799 776 aa11.95□□□□□ -0.5
RFC1-210ENST00000505077 CCDC96Q2M329 555 aa11.95□□□□□ -0.5
RFC1-210ENST00000505077 HS6ST3Q8IZP7 471 aa11.95□□□□□ -0.5
RFC1-210ENST00000505077 FANCBQ8NB91 859 aa11.95□□□□□ -0.5
RFC1-210ENST00000505077 NUP133Q8WUM0 1156 aa11.95□□□□□ -0.5
RFC1-210ENST00000505077 GTF3C6Q969F1 213 aa11.95□□□□□ -0.5
RFC1-210ENST00000505077 SLKQ9H2G2 1235 aaPredicted RBP11.95□□□□□ -0.5
RFC1-210ENST00000505077 EMILIN3Q9NT22 766 aa11.95□□□□□ -0.5
RFC1-210ENST00000505077 RBM27Q9P2N5 1060 aaKnown RBP11.95□□□□□ -0.5
RFC1-210ENST00000505077 FEM1BQ9UK73 627 aa11.95□□□□□ -0.5
RFC1-210ENST00000505077 NAP1L2Q9ULW6 460 aaPredicted RBP11.95□□□□□ -0.5
RFC1-210ENST00000505077 AGTPBP1Q9UPW5 1226 aa11.95□□□□□ -0.5
RFC1-210ENST00000505077 HPS5Q9UPZ3 1129 aa11.95□□□□□ -0.5
RFC1-210ENST00000505077 PLXNB2O15031 1838 aa11.95□□□□□ -0.5
RFC1-210ENST00000505077 MYH15Q9Y2K3 1946 aa11.94□□□□□ -0.5
RFC1-210ENST00000505077 CCL15-CCL14A0A0B4J2E2 113 aa11.94□□□□□ -0.5
RFC1-210ENST00000505077 TESPA1A2RU30 521 aaPredicted RBP11.94□□□□□ -0.5
RFC1-210ENST00000505077 PALM3A6NDB9 673 aaPredicted RBP11.94□□□□□ -0.5
RFC1-210ENST00000505077 USP17L15C9J2P7 530 aa11.94□□□□□ -0.5
RFC1-210ENST00000505077 USP17L13C9JLJ4 530 aa11.94□□□□□ -0.5
RFC1-210ENST00000505077 USP17L11C9JVI0 530 aa11.94□□□□□ -0.5
RFC1-210ENST00000505077 USP17L18D6R9N7 530 aa11.94□□□□□ -0.5
RFC1-210ENST00000505077 USP17L22D6RA61 530 aa11.94□□□□□ -0.5
RFC1-210ENST00000505077 USP17L17D6RBQ6 530 aa11.94□□□□□ -0.5
RFC1-210ENST00000505077 USP17L19D6RCP7 530 aa11.94□□□□□ -0.5
RFC1-210ENST00000505077 USP17L20D6RJB6 530 aa11.94□□□□□ -0.5
RFC1-210ENST00000505077 K7ELQ4 463 aaPredicted RBP11.94□□□□□ -0.5
RFC1-210ENST00000505077 RAD21O60216 631 aa11.94□□□□□ -0.5
RFC1-210ENST00000505077 CD2BP2O95400 341 aaKnown RBP11.94□□□□□ -0.5
RFC1-210ENST00000505077 FDX1P10109 184 aa11.94□□□□□ -0.5
RFC1-210ENST00000505077 HOXA7P31268 230 aaPredicted RBP11.94□□□□□ -0.5
RFC1-210ENST00000505077 C1QTNF8P60827 252 aa11.94□□□□□ -0.5
RFC1-210ENST00000505077 USP17L24Q0WX57 530 aa11.94□□□□□ -0.5
RFC1-210ENST00000505077 ZYXQ15942 572 aaKnown RBP11.94□□□□□ -0.5
RFC1-210ENST00000505077 CCL15Q16663 113 aa11.94□□□□□ -0.5
RFC1-210ENST00000505077 ME3Q16798 604 aa11.94□□□□□ -0.5
RFC1-210ENST00000505077 DEFB115Q30KQ5 88 aa11.94□□□□□ -0.5
RFC1-210ENST00000505077 BTNL9Q6UXG8 535 aa11.94□□□□□ -0.5
RFC1-210ENST00000505077 FAM160B2Q86V87 743 aa11.94□□□□□ -0.5
RFC1-210ENST00000505077 SPICE1Q8N0Z3 855 aa11.94□□□□□ -0.5
RFC1-210ENST00000505077 CHURC1Q8WUH1 139 aa11.94□□□□□ -0.5
RFC1-210ENST00000505077 MS4A4AQ96JQ5 239 aa11.94□□□□□ -0.5
RFC1-210ENST00000505077 LLPHQ9BRT6 129 aaKnown RBP11.94□□□□□ -0.5
RFC1-210ENST00000505077 MAD2L2Q9UI95 211 aa11.94□□□□□ -0.5
RFC1-210ENST00000505077 PNMA3Q9UL41 463 aa11.94□□□□□ -0.5
RFC1-210ENST00000505077 PLXNA1Q9UIW2 1896 aa11.93□□□□□ -0.5
RFC1-210ENST00000505077 CPLX1O14810 134 aa11.93□□□□□ -0.5
RFC1-210ENST00000505077 HSPA6P17066 643 aa11.93□□□□□ -0.5
RFC1-210ENST00000505077 MOGSQ13724 837 aa11.93□□□□□ -0.5
RFC1-210ENST00000505077 FAM83BQ5T0W9 1011 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms