RNA–Protein interactions for RNA: ENST00000504751.5

TRAPPC13-206, Transcript of trafficking protein particle complex 13, humanhuman

TSL 4

Gene TRAPPC13, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-206ENST00000504751 PLAGL2Q9UPG8 496 aa8.37□□□□□ -1.07
TRAPPC13-206ENST00000504751 LEMD3Q9Y2U8 911 aa8.37□□□□□ -1.07
TRAPPC13-206ENST00000504751 LOC105371045A0A1W2PR82 267 aa8.36□□□□□ -1.07
TRAPPC13-206ENST00000504751 SHISA3A0PJX4 238 aa8.36□□□□□ -1.07
TRAPPC13-206ENST00000504751 NAT2P11245 290 aa8.36□□□□□ -1.07
TRAPPC13-206ENST00000504751 FOSL1P15407 271 aa8.36□□□□□ -1.07
TRAPPC13-206ENST00000504751 MTERF2Q49AM1 385 aa8.36□□□□□ -1.07
TRAPPC13-206ENST00000504751 SPATC1Q76KD6 591 aa8.36□□□□□ -1.07
TRAPPC13-206ENST00000504751 TMC3Q7Z5M5 1100 aa8.36□□□□□ -1.07
TRAPPC13-206ENST00000504751 PRR13Q9NZ81 148 aa8.36□□□□□ -1.07
TRAPPC13-206ENST00000504751 WHRNQ9P202 907 aa8.36□□□□□ -1.07
TRAPPC13-206ENST00000504751 ST14Q9Y5Y6 855 aa8.36□□□□□ -1.07
TRAPPC13-206ENST00000504751 FAM155AB1AL88 458 aaPredicted RBP8.35□□□□□ -1.07
TRAPPC13-206ENST00000504751 CYP26A1O43174 497 aa8.35□□□□□ -1.07
TRAPPC13-206ENST00000504751 TGFB1P01137 390 aa8.35□□□□□ -1.07
TRAPPC13-206ENST00000504751 SRFP11831 508 aa8.35□□□□□ -1.07
TRAPPC13-206ENST00000504751 ITGB7P26010 798 aa8.35□□□□□ -1.07
TRAPPC13-206ENST00000504751 ZNF445P59923 1031 aa8.35□□□□□ -1.07
TRAPPC13-206ENST00000504751 NMIQ13287 307 aaPredicted RBP8.35□□□□□ -1.07
TRAPPC13-206ENST00000504751 JAZF1Q86VZ6 243 aa8.35□□□□□ -1.07
TRAPPC13-206ENST00000504751 PLD6Q8N2A8 252 aaKnown RBP8.35□□□□□ -1.07
TRAPPC13-206ENST00000504751 FGD4Q96M96 766 aa8.35□□□□□ -1.07
TRAPPC13-206ENST00000504751 DNAJC7Q99615 494 aa8.35□□□□□ -1.07
TRAPPC13-206ENST00000504751 GPR62Q9BZJ7 368 aa8.35□□□□□ -1.07
TRAPPC13-206ENST00000504751 GBP3Q9H0R5 595 aa8.35□□□□□ -1.07
TRAPPC13-206ENST00000504751 SEMA6BQ9H3T3 888 aa8.35□□□□□ -1.07
TRAPPC13-206ENST00000504751 ZMYM5Q9UJ78 669 aa8.35□□□□□ -1.07
TRAPPC13-206ENST00000504751 TBX22Q9Y458 520 aa8.35□□□□□ -1.07
TRAPPC13-206ENST00000504751 FHOD1Q9Y613 1164 aa8.35□□□□□ -1.07
TRAPPC13-206ENST00000504751 SIGLEC6O43699 453 aa8.34□□□□□ -1.07
TRAPPC13-206ENST00000504751 PRAMEF1O95521 474 aa8.34□□□□□ -1.07
TRAPPC13-206ENST00000504751 ITGA4P13612 1032 aa8.34□□□□□ -1.07
TRAPPC13-206ENST00000504751 CLCN7P51798 805 aa8.34□□□□□ -1.07
TRAPPC13-206ENST00000504751 IFRD2Q12894 506 aaPredicted RBP8.34□□□□□ -1.07
TRAPPC13-206ENST00000504751 TCEAL1Q15170 157 aa8.34□□□□□ -1.07
TRAPPC13-206ENST00000504751 ARHGAP27Q6ZUM4 889 aa8.34□□□□□ -1.07
TRAPPC13-206ENST00000504751 HDAC8Q9BY41 377 aa8.34□□□□□ -1.07
TRAPPC13-206ENST00000504751 DUSP15Q9H1R2 295 aaPredicted RBP8.34□□□□□ -1.07
TRAPPC13-206ENST00000504751 GFOD1Q9NXC2 390 aa8.34□□□□□ -1.07
TRAPPC13-206ENST00000504751 ZC3H7BQ9UGR2 993 aaKnown RBP8.34□□□□□ -1.07
TRAPPC13-206ENST00000504751 FBXL21Q9UKT6 434 aa8.34□□□□□ -1.07
TRAPPC13-206ENST00000504751 DIAPH1O60610 1272 aaKnown RBP8.33□□□□□ -1.08
TRAPPC13-206ENST00000504751 HOXA10P31260 410 aaPredicted RBP8.33□□□□□ -1.08
TRAPPC13-206ENST00000504751 MSMPQ1L6U9 139 aa8.33□□□□□ -1.08
TRAPPC13-206ENST00000504751 ADCY4Q8NFM4 1077 aa8.33□□□□□ -1.08
TRAPPC13-206ENST00000504751 SYTL5Q8TDW5 730 aaPredicted RBP8.33□□□□□ -1.08
TRAPPC13-206ENST00000504751 APBA2Q99767 749 aa8.33□□□□□ -1.08
TRAPPC13-206ENST00000504751 PFDN2Q9UHV9 154 aa8.33□□□□□ -1.08
TRAPPC13-206ENST00000504751 A0A087WZG4 1122 aa8.32□□□□□ -1.08
TRAPPC13-206ENST00000504751 PPM1BO75688 479 aa8.32□□□□□ -1.08
TRAPPC13-206ENST00000504751 IFI16Q16666 785 aaKnown RBP8.32□□□□□ -1.08
TRAPPC13-206ENST00000504751 SV2CQ496J9 727 aa8.32□□□□□ -1.08
TRAPPC13-206ENST00000504751 CDKAL1Q5VV42 579 aa8.32□□□□□ -1.08
TRAPPC13-206ENST00000504751 ZNF227Q86WZ6 799 aa8.32□□□□□ -1.08
TRAPPC13-206ENST00000504751 LILRB2Q8N423 598 aa8.32□□□□□ -1.08
TRAPPC13-206ENST00000504751 FIBCD1Q8N539 461 aa8.32□□□□□ -1.08
TRAPPC13-206ENST00000504751 NETO1Q8TDF5 533 aa8.32□□□□□ -1.08
TRAPPC13-206ENST00000504751 BRF1Q92994 677 aa8.32□□□□□ -1.08
TRAPPC13-206ENST00000504751 RCC1LQ96I51 464 aaKnown RBP8.32□□□□□ -1.08
TRAPPC13-206ENST00000504751 HSPA12BQ96MM6 686 aa8.32□□□□□ -1.08
TRAPPC13-206ENST00000504751 LGR4Q9BXB1 951 aa8.32□□□□□ -1.08
TRAPPC13-206ENST00000504751 CGGBP1Q9UFW8 167 aaPredicted RBP8.32□□□□□ -1.08
TRAPPC13-206ENST00000504751 MINPP1Q9UNW1 487 aa8.32□□□□□ -1.08
TRAPPC13-206ENST00000504751 ADCY3O60266 1144 aa8.31□□□□□ -1.08
TRAPPC13-206ENST00000504751 ITGAVP06756 1048 aa8.31□□□□□ -1.08
TRAPPC13-206ENST00000504751 SSRP1Q08945 709 aaKnown RBP8.31□□□□□ -1.08
TRAPPC13-206ENST00000504751 THAP5Q7Z6K1 395 aa8.31□□□□□ -1.08
TRAPPC13-206ENST00000504751 ADAT2Q7Z6V5 191 aaKnown RBP8.31□□□□□ -1.08
TRAPPC13-206ENST00000504751 NLGN1Q8N2Q7 840 aa8.31□□□□□ -1.08
TRAPPC13-206ENST00000504751 ARHGEF39Q8N4T4 335 aa8.31□□□□□ -1.08
TRAPPC13-206ENST00000504751 JMYQ8N9B5 988 aa8.31□□□□□ -1.08
TRAPPC13-206ENST00000504751 ENOX1Q8TC92 643 aaKnown RBP8.31□□□□□ -1.08
TRAPPC13-206ENST00000504751 CHST7Q9NS84 486 aa8.31□□□□□ -1.08
TRAPPC13-206ENST00000504751 MRPL42Q9Y6G3 142 aaKnown RBP8.31□□□□□ -1.08
TRAPPC13-206ENST00000504751 PITPNM2Q9BZ72 1349 aa8.3□□□□□ -1.08
TRAPPC13-206ENST00000504751 A0A1W2PQU0 124 aa8.3□□□□□ -1.08
TRAPPC13-206ENST00000504751 H3BS24 57 aa8.3□□□□□ -1.08
TRAPPC13-206ENST00000504751 TBX1O43435 398 aa8.3□□□□□ -1.08
TRAPPC13-206ENST00000504751 CTSKP43235 329 aa8.3□□□□□ -1.08
TRAPPC13-206ENST00000504751 GAB4Q2WGN9 574 aa8.3□□□□□ -1.08
TRAPPC13-206ENST00000504751 NOL9Q5SY16 702 aaKnown RBP8.3□□□□□ -1.08
TRAPPC13-206ENST00000504751 DAGLBQ8NCG7 672 aa8.3□□□□□ -1.08
TRAPPC13-206ENST00000504751 BVESQ8NE79 360 aa8.3□□□□□ -1.08
TRAPPC13-206ENST00000504751 SGSM3Q96HU1 749 aa8.3□□□□□ -1.08
TRAPPC13-206ENST00000504751 MRGPRX3Q96LB0 322 aa8.3□□□□□ -1.08
TRAPPC13-206ENST00000504751 RNPC3Q96LT9 517 aaKnown RBP8.3□□□□□ -1.08
TRAPPC13-206ENST00000504751 ASCC2Q9H1I8 757 aaPredicted RBP8.3□□□□□ -1.08
TRAPPC13-206ENST00000504751 NOL6Q9H6R4 1146 aaKnown RBP8.3□□□□□ -1.08
TRAPPC13-206ENST00000504751 SEMA3GQ9NS98 782 aa8.3□□□□□ -1.08
TRAPPC13-206ENST00000504751 GPATCH2Q9NW75 528 aa8.3□□□□□ -1.08
TRAPPC13-206ENST00000504751 EMC9Q9Y3B6 208 aa8.3□□□□□ -1.08
TRAPPC13-206ENST00000504751 TMEM265A0A087WTH1 108 aa8.29□□□□□ -1.08
TRAPPC13-206ENST00000504751 IQCA1LA6NCM1 817 aa8.29□□□□□ -1.08
TRAPPC13-206ENST00000504751 WASH4PA8MWX3 477 aa8.29□□□□□ -1.08
TRAPPC13-206ENST00000504751 CAPNS1P04632 268 aa8.29□□□□□ -1.08
TRAPPC13-206ENST00000504751 TSPYL5Q86VY4 417 aaPredicted RBP8.29□□□□□ -1.08
TRAPPC13-206ENST00000504751 LRRC47Q8N1G4 583 aaKnown RBP8.29□□□□□ -1.08
TRAPPC13-206ENST00000504751 ZNF655Q8N720 491 aaPredicted RBP8.29□□□□□ -1.08
TRAPPC13-206ENST00000504751 SH3TC2Q8TF17 1288 aa8.29□□□□□ -1.08
TRAPPC13-206ENST00000504751 SPATA9Q9BWV2 254 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms