RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 USP17L5A8MUK1 530 aa9.37□□□□□ -0.91
TOPBP1-202ENST00000503338 PHF20L1A8MW92 1017 aa9.37□□□□□ -0.91
TOPBP1-202ENST00000503338 F5H6K3 240 aa9.37□□□□□ -0.91
TOPBP1-202ENST00000503338 PLA2G6O60733 806 aa9.37□□□□□ -0.91
TOPBP1-202ENST00000503338 MBD3O95983 291 aa9.37□□□□□ -0.91
TOPBP1-202ENST00000503338 HIRAP54198 1017 aaPredicted RBP9.37□□□□□ -0.91
TOPBP1-202ENST00000503338 KIF23Q02241 960 aaPredicted RBP9.37□□□□□ -0.91
TOPBP1-202ENST00000503338 DNM1Q05193 864 aaKnown RBP9.37□□□□□ -0.91
TOPBP1-202ENST00000503338 KLRC3Q07444 240 aa9.37□□□□□ -0.91
TOPBP1-202ENST00000503338 NBR1Q14596 966 aa9.37□□□□□ -0.91
TOPBP1-202ENST00000503338 FERMT3Q86UX7 667 aa9.37□□□□□ -0.91
TOPBP1-202ENST00000503338 TEX2Q8IWB9 1127 aa9.37□□□□□ -0.91
TOPBP1-202ENST00000503338 LPAR1Q92633 364 aa9.37□□□□□ -0.91
TOPBP1-202ENST00000503338 PHF20Q9BVI0 1012 aa9.37□□□□□ -0.91
TOPBP1-202ENST00000503338 GLT8D2Q9H1C3 349 aa9.37□□□□□ -0.91
TOPBP1-202ENST00000503338 PICK1Q9NRD5 415 aa9.37□□□□□ -0.91
TOPBP1-202ENST00000503338 MTMR7Q9Y216 660 aa9.37□□□□□ -0.91
TOPBP1-202ENST00000503338 PNMA6FA0A0J9YX94 578 aa9.36□□□□□ -0.91
TOPBP1-202ENST00000503338 PPP1R12BO60237 982 aaPredicted RBP9.36□□□□□ -0.91
TOPBP1-202ENST00000503338 PPFIA3O75145 1194 aa9.36□□□□□ -0.91
TOPBP1-202ENST00000503338 BMP3P12645 472 aa9.36□□□□□ -0.91
TOPBP1-202ENST00000503338 GNA11P29992 359 aa9.36□□□□□ -0.91
TOPBP1-202ENST00000503338 KRT2P35908 639 aa9.36□□□□□ -0.91
TOPBP1-202ENST00000503338 FOSBP53539 338 aa9.36□□□□□ -0.91
TOPBP1-202ENST00000503338 USP14P54578 494 aa9.36□□□□□ -0.91
TOPBP1-202ENST00000503338 NLRP5P59047 1200 aa9.36□□□□□ -0.91
TOPBP1-202ENST00000503338 GUCY1B3Q02153 619 aa9.36□□□□□ -0.91
TOPBP1-202ENST00000503338 RILPL1Q5EBL4 403 aa9.36□□□□□ -0.91
TOPBP1-202ENST00000503338 NOL9Q5SY16 702 aaKnown RBP9.36□□□□□ -0.91
TOPBP1-202ENST00000503338 NBPF12Q5TAG4 269 aaPredicted RBP9.36□□□□□ -0.91
TOPBP1-202ENST00000503338 PPP1R18Q6NYC8 613 aa9.36□□□□□ -0.91
TOPBP1-202ENST00000503338 FAM160B2Q86V87 743 aa9.36□□□□□ -0.91
TOPBP1-202ENST00000503338 SIAH1Q8IUQ4 282 aa9.36□□□□□ -0.91
TOPBP1-202ENST00000503338 NOSTRINQ8IVI9 506 aa9.36□□□□□ -0.91
TOPBP1-202ENST00000503338 DIS3L2Q8IYB7 885 aaKnown RBP9.36□□□□□ -0.91
TOPBP1-202ENST00000503338 SCYL3Q8IZE3 742 aa9.36□□□□□ -0.91
TOPBP1-202ENST00000503338 CMTR1Q8N1G2 835 aaKnown RBP9.36□□□□□ -0.91
TOPBP1-202ENST00000503338 DAGLBQ8NCG7 672 aa9.36□□□□□ -0.91
TOPBP1-202ENST00000503338 BICD2Q8TD16 824 aa9.36□□□□□ -0.91
TOPBP1-202ENST00000503338 CHURC1Q8WUH1 139 aa9.36□□□□□ -0.91
TOPBP1-202ENST00000503338 AIFM3Q96NN9 605 aa9.36□□□□□ -0.91
TOPBP1-202ENST00000503338 VCPKMTQ9H867 229 aa9.36□□□□□ -0.91
TOPBP1-202ENST00000503338 BARHL2Q9NY43 387 aa9.36□□□□□ -0.91
TOPBP1-202ENST00000503338 ASTN2O75129 1339 aaPredicted RBP9.35□□□□□ -0.91
TOPBP1-202ENST00000503338 FRMPD2Q68DX3 1309 aaPredicted RBP9.35□□□□□ -0.91
TOPBP1-202ENST00000503338 ESYT2A0FGR8 921 aa9.35□□□□□ -0.91
TOPBP1-202ENST00000503338 ZBTB5O15062 677 aa9.35□□□□□ -0.91
TOPBP1-202ENST00000503338 CYTH3O43739 400 aa9.35□□□□□ -0.91
TOPBP1-202ENST00000503338 PRPF40AO75400 957 aaKnown RBP9.35□□□□□ -0.91
TOPBP1-202ENST00000503338 YEATS4O95619 227 aa9.35□□□□□ -0.91
TOPBP1-202ENST00000503338 BMP15O95972 392 aa9.35□□□□□ -0.91
TOPBP1-202ENST00000503338 NDUFB10O96000 172 aa9.35□□□□□ -0.91
TOPBP1-202ENST00000503338 GOLGA8HP0CJ92 632 aa9.35□□□□□ -0.91
TOPBP1-202ENST00000503338 IREB2P48200 963 aaKnown RBP9.35□□□□□ -0.91
TOPBP1-202ENST00000503338 UBE2HP62256 183 aa9.35□□□□□ -0.91
TOPBP1-202ENST00000503338 RRP1BQ14684 758 aaKnown RBP9.35□□□□□ -0.91
TOPBP1-202ENST00000503338 MYSM1Q5VVJ2 828 aa9.35□□□□□ -0.91
TOPBP1-202ENST00000503338 BTNL9Q6UXG8 535 aa9.35□□□□□ -0.91
TOPBP1-202ENST00000503338 KRT26Q7Z3Y9 468 aa9.35□□□□□ -0.91
TOPBP1-202ENST00000503338 CLEC10AQ8IUN9 316 aa9.35□□□□□ -0.91
TOPBP1-202ENST00000503338 JMYQ8N9B5 988 aa9.35□□□□□ -0.91
TOPBP1-202ENST00000503338 KCNG4Q8TDN1 519 aa9.35□□□□□ -0.91
TOPBP1-202ENST00000503338 KLRG1Q96E93 195 aa9.35□□□□□ -0.91
TOPBP1-202ENST00000503338 MTMR8Q96EF0 704 aa9.35□□□□□ -0.91
TOPBP1-202ENST00000503338 SPATA32Q96LK8 384 aa9.35□□□□□ -0.91
TOPBP1-202ENST00000503338 WRNIP1Q96S55 665 aa9.35□□□□□ -0.91
TOPBP1-202ENST00000503338 FEZ1Q99689 392 aa9.35□□□□□ -0.91
TOPBP1-202ENST00000503338 WDR18Q9BV38 432 aa9.35□□□□□ -0.91
TOPBP1-202ENST00000503338 KIAA1683Q9H0B3 1180 aa9.35□□□□□ -0.91
TOPBP1-202ENST00000503338 TAF1DQ9H5J8 278 aaPredicted RBP9.35□□□□□ -0.91
TOPBP1-202ENST00000503338 C6orf50Q9HD87 102 aa9.35□□□□□ -0.91
TOPBP1-202ENST00000503338 LMBRD1Q9NUN5 540 aa9.35□□□□□ -0.91
TOPBP1-202ENST00000503338 POLR3EQ9NVU0 708 aa9.35□□□□□ -0.91
TOPBP1-202ENST00000503338 RTEL1Q9NZ71 1219 aa9.35□□□□□ -0.91
TOPBP1-202ENST00000503338 VPS54Q9P1Q0 977 aa9.35□□□□□ -0.91
TOPBP1-202ENST00000503338 PNMA2Q9UL42 364 aa9.35□□□□□ -0.91
TOPBP1-202ENST00000503338 ISY1Q9ULR0 285 aaKnown RBP9.35□□□□□ -0.91
TOPBP1-202ENST00000503338 NOL7Q9UMY1 257 aaKnown RBP9.35□□□□□ -0.91
TOPBP1-202ENST00000503338 CEP131Q9UPN4 1083 aa9.35□□□□□ -0.91
TOPBP1-202ENST00000503338 SCN4AP35499 1836 aa9.35□□□□□ -0.91
TOPBP1-202ENST00000503338 GOLGA6L4A6NEF3 574 aa9.34□□□□□ -0.91
TOPBP1-202ENST00000503338 UNCXA6NJT0 531 aa9.34□□□□□ -0.91
TOPBP1-202ENST00000503338 C19orf81C9J6K1 198 aa9.34□□□□□ -0.91
TOPBP1-202ENST00000503338 USP17L10C9JJH3 530 aa9.34□□□□□ -0.91
TOPBP1-202ENST00000503338 WDR46O15213 610 aaKnown RBP9.34□□□□□ -0.91
TOPBP1-202ENST00000503338 FIBPO43427 364 aa9.34□□□□□ -0.91
TOPBP1-202ENST00000503338 RAD21O60216 631 aa9.34□□□□□ -0.91
TOPBP1-202ENST00000503338 TRAK2O60296 914 aa9.34□□□□□ -0.91
TOPBP1-202ENST00000503338 DTNBO60941 627 aa9.34□□□□□ -0.91
TOPBP1-202ENST00000503338 SLURP2P0DP57 97 aa9.34□□□□□ -0.91
TOPBP1-202ENST00000503338 FDX1P10109 184 aa9.34□□□□□ -0.91
TOPBP1-202ENST00000503338 TRAPPC10P48553 1259 aa9.34□□□□□ -0.91
TOPBP1-202ENST00000503338 STAT2P52630 851 aa9.34□□□□□ -0.91
TOPBP1-202ENST00000503338 IKQ13123 557 aaPredicted RBP9.34□□□□□ -0.91
TOPBP1-202ENST00000503338 KLHL40Q2TBA0 621 aa9.34□□□□□ -0.91
TOPBP1-202ENST00000503338 MCTP2Q6DN12 878 aa9.34□□□□□ -0.91
TOPBP1-202ENST00000503338 OTUD7BQ6GQQ9 843 aa9.34□□□□□ -0.91
TOPBP1-202ENST00000503338 HEATR3Q7Z4Q2 680 aa9.34□□□□□ -0.91
TOPBP1-202ENST00000503338 CDAN1Q8IWY9 1227 aa9.34□□□□□ -0.91
TOPBP1-202ENST00000503338 ADGRF4Q8IZF3 695 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms