RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 A0A1W2PQH9 124 aa7.55□□□□□ -1.2
SSR3-209ENST00000498205 JUNBP17275 347 aaPredicted RBP7.55□□□□□ -1.2
SSR3-209ENST00000498205 DNAJA1P31689 397 aaKnown RBP7.55□□□□□ -1.2
SSR3-209ENST00000498205 CD96P40200 585 aa7.55□□□□□ -1.2
SSR3-209ENST00000498205 TCEAL1Q15170 157 aa7.55□□□□□ -1.2
SSR3-209ENST00000498205 PPP2R5EQ16537 467 aa7.55□□□□□ -1.2
SSR3-209ENST00000498205 RNF111Q6ZNA4 994 aa7.55□□□□□ -1.2
SSR3-209ENST00000498205 ATG4DQ86TL0 474 aaPredicted RBP7.55□□□□□ -1.2
SSR3-209ENST00000498205 CREG2Q8IUH2 290 aa7.55□□□□□ -1.2
SSR3-209ENST00000498205 DHX38Q92620 1227 aaKnown RBP7.55□□□□□ -1.2
SSR3-209ENST00000498205 ANAPC16Q96DE5 110 aa7.55□□□□□ -1.2
SSR3-209ENST00000498205 ALPK1Q96QP1 1244 aa7.55□□□□□ -1.2
SSR3-209ENST00000498205 RC3H2Q9HBD1 1191 aaKnown RBP7.55□□□□□ -1.2
SSR3-209ENST00000498205 ESR1P03372 595 aa7.54□□□□□ -1.2
SSR3-209ENST00000498205 RNASE1P07998 156 aaKnown RBP7.54□□□□□ -1.2
SSR3-209ENST00000498205 NAT2P11245 290 aa7.54□□□□□ -1.2
SSR3-209ENST00000498205 PCBP3P57721 371 aaKnown RBP7.54□□□□□ -1.2
SSR3-209ENST00000498205 SLC7A5Q01650 507 aa7.54□□□□□ -1.2
SSR3-209ENST00000498205 NAALADL2Q58DX5 795 aa7.54□□□□□ -1.2
SSR3-209ENST00000498205 ZNF512BQ96KM6 892 aaPredicted RBP7.54□□□□□ -1.2
SSR3-209ENST00000498205 PRDM14Q9GZV8 571 aa7.54□□□□□ -1.2
SSR3-209ENST00000498205 PRKAG3Q9UGI9 489 aa7.54□□□□□ -1.2
SSR3-209ENST00000498205 A0A087WZG4 1122 aa7.53□□□□□ -1.2
SSR3-209ENST00000498205 SSU72P8A0A1W2PR75 194 aa7.53□□□□□ -1.2
SSR3-209ENST00000498205 GDNFP39905 211 aa7.53□□□□□ -1.2
SSR3-209ENST00000498205 ZNF143P52747 638 aaPredicted RBP7.53□□□□□ -1.2
SSR3-209ENST00000498205 EGR3Q06889 387 aa7.53□□□□□ -1.2
SSR3-209ENST00000498205 NCAPHQ15003 741 aa7.53□□□□□ -1.2
SSR3-209ENST00000498205 ZYXQ15942 572 aaKnown RBP7.53□□□□□ -1.2
SSR3-209ENST00000498205 GNPTABQ3T906 1256 aa7.53□□□□□ -1.2
SSR3-209ENST00000498205 FLAD1Q8NFF5 587 aa7.53□□□□□ -1.2
SSR3-209ENST00000498205 GBP3Q9H0R5 595 aa7.53□□□□□ -1.2
SSR3-209ENST00000498205 CHST7Q9NS84 486 aa7.53□□□□□ -1.2
SSR3-209ENST00000498205 MBNL3Q9NUK0 354 aaKnown RBP7.53□□□□□ -1.2
SSR3-209ENST00000498205 ACTR10Q9NZ32 417 aa7.53□□□□□ -1.2
SSR3-209ENST00000498205 TMEM59LQ9UK28 342 aa7.53□□□□□ -1.2
SSR3-209ENST00000498205 R3HCC1Q9Y3T6 440 aaKnown RBP7.53□□□□□ -1.2
SSR3-209ENST00000498205 LTBP3Q9NS15 1303 aa7.52□□□□□ -1.2
SSR3-209ENST00000498205 DCAF1Q9Y4B6 1507 aa7.52□□□□□ -1.2
SSR3-209ENST00000498205 SHISA3A0PJX4 238 aa7.52□□□□□ -1.21
SSR3-209ENST00000498205 FAM86C2PA6NEL3 165 aa7.52□□□□□ -1.21
SSR3-209ENST00000498205 C9IYK1 514 aa7.52□□□□□ -1.21
SSR3-209ENST00000498205 PRAMEF1O95521 474 aa7.52□□□□□ -1.21
SSR3-209ENST00000498205 GSNP06396 782 aa7.52□□□□□ -1.21
SSR3-209ENST00000498205 ITGA4P13612 1032 aa7.52□□□□□ -1.21
SSR3-209ENST00000498205 CD247P20963 164 aa7.52□□□□□ -1.21
SSR3-209ENST00000498205 DUSP4Q13115 394 aa7.52□□□□□ -1.21
SSR3-209ENST00000498205 NOL9Q5SY16 702 aaKnown RBP7.52□□□□□ -1.21
SSR3-209ENST00000498205 MCF2L2Q86YR7 1114 aa7.52□□□□□ -1.21
SSR3-209ENST00000498205 LINC00116Q8NCU8 138 aa7.52□□□□□ -1.21
SSR3-209ENST00000498205 TCTN2Q96GX1 697 aa7.52□□□□□ -1.21
SSR3-209ENST00000498205 DSCC1Q9BVC3 393 aa7.52□□□□□ -1.21
SSR3-209ENST00000498205 BMP8BP34820 402 aa7.51□□□□□ -1.21
SSR3-209ENST00000498205 AFMP43652 599 aa7.51□□□□□ -1.21
SSR3-209ENST00000498205 RBM10P98175 930 aaKnown RBP7.51□□□□□ -1.21
SSR3-209ENST00000498205 AXDND1Q5T1B0 1012 aaPredicted RBP7.51□□□□□ -1.21
SSR3-209ENST00000498205 CWF19L1Q69YN2 538 aaKnown RBP7.51□□□□□ -1.21
SSR3-209ENST00000498205 HEATR6Q6AI08 1181 aaKnown RBP7.51□□□□□ -1.21
SSR3-209ENST00000498205 TMC3Q7Z5M5 1100 aa7.51□□□□□ -1.21
SSR3-209ENST00000498205 PPFIBP1Q86W92 1011 aa7.51□□□□□ -1.21
SSR3-209ENST00000498205 WHRNQ9P202 907 aa7.51□□□□□ -1.21
SSR3-209ENST00000498205 SF3B6Q9Y3B4 125 aaKnown RBP7.51□□□□□ -1.21
SSR3-209ENST00000498205 PCDHA11Q9Y5I1 949 aa7.51□□□□□ -1.21
SSR3-209ENST00000498205 FHOD1Q9Y613 1164 aa7.51□□□□□ -1.21
SSR3-209ENST00000498205 TP53P04637 393 aaPredicted RBP7.5□□□□□ -1.21
SSR3-209ENST00000498205 RAC2P15153 192 aa7.5□□□□□ -1.21
SSR3-209ENST00000498205 SNW1Q13573 536 aaKnown RBP7.5□□□□□ -1.21
SSR3-209ENST00000498205 FXNQ16595 210 aa7.5□□□□□ -1.21
SSR3-209ENST00000498205 TDRD10Q5VZ19 366 aaKnown RBP7.5□□□□□ -1.21
SSR3-209ENST00000498205 MCTP1Q6DN14 999 aa7.5□□□□□ -1.21
SSR3-209ENST00000498205 VHLLQ6RSH7 139 aa7.5□□□□□ -1.21
SSR3-209ENST00000498205 NPM2Q86SE8 214 aaKnown RBP7.5□□□□□ -1.21
SSR3-209ENST00000498205 OXR1Q8N573 874 aa7.5□□□□□ -1.21
SSR3-209ENST00000498205 FAM169BQ8N8A8 192 aa7.5□□□□□ -1.21
SSR3-209ENST00000498205 LRRN4CLQ8ND94 238 aa7.5□□□□□ -1.21
SSR3-209ENST00000498205 ARMC5Q96C12 935 aa7.5□□□□□ -1.21
SSR3-209ENST00000498205 ASIC4Q96FT7 647 aa7.5□□□□□ -1.21
SSR3-209ENST00000498205 HAUS7Q99871 368 aa7.5□□□□□ -1.21
SSR3-209ENST00000498205 GP6Q9HCN6 339 aa7.5□□□□□ -1.21
SSR3-209ENST00000498205 GFOD1Q9NXC2 390 aa7.5□□□□□ -1.21
SSR3-209ENST00000498205 ADAMTS6Q9UKP5 1117 aa7.5□□□□□ -1.21
SSR3-209ENST00000498205 TCFL5Q9UL49 500 aa7.5□□□□□ -1.21
SSR3-209ENST00000498205 DIS3Q9Y2L1 958 aaKnown RBP7.5□□□□□ -1.21
SSR3-209ENST00000498205 SMAD7O15105 426 aaKnown RBP7.49□□□□□ -1.21
SSR3-209ENST00000498205 SHOXO15266 292 aa7.49□□□□□ -1.21
SSR3-209ENST00000498205 PPM1BO75688 479 aa7.49□□□□□ -1.21
SSR3-209ENST00000498205 ITGB5P18084 799 aa7.49□□□□□ -1.21
SSR3-209ENST00000498205 NOP2P46087 812 aaKnown RBP7.49□□□□□ -1.21
SSR3-209ENST00000498205 CHRNEQ04844 493 aa7.49□□□□□ -1.21
SSR3-209ENST00000498205 SF3A1Q15459 793 aaKnown RBP7.49□□□□□ -1.21
SSR3-209ENST00000498205 DCAF15Q66K64 600 aa7.49□□□□□ -1.21
SSR3-209ENST00000498205 SPPL2CQ8IUH8 684 aa7.49□□□□□ -1.21
SSR3-209ENST00000498205 CRACR2BQ8N4Y2 399 aaPredicted RBP7.49□□□□□ -1.21
SSR3-209ENST00000498205 USHBP1Q8N6Y0 703 aa7.49□□□□□ -1.21
SSR3-209ENST00000498205 PDZD8Q8NEN9 1154 aa7.49□□□□□ -1.21
SSR3-209ENST00000498205 ZNF408Q9H9D4 720 aa7.49□□□□□ -1.21
SSR3-209ENST00000498205 SLAMF8Q9P0V8 285 aa7.49□□□□□ -1.21
SSR3-209ENST00000498205 MRVI1Q9Y6F6 885 aa7.49□□□□□ -1.21
SSR3-209ENST00000498205 FITM1A5D6W6 292 aa7.48□□□□□ -1.21
SSR3-209ENST00000498205 ANKRD34BA5PLL1 514 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms