RNA–Protein interactions for RNA: ENST00000497957.1

PTK7-220, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 3

Gene PTK7, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-220ENST00000497957 ZHX2Q9Y6X8 837 aa18.56■□□□□ 0.56
PTK7-220ENST00000497957 V9GY48 417 aaPredicted RBP18.56■□□□□ 0.56
PTK7-220ENST00000497957 KIF3CO14782 793 aa18.55■□□□□ 0.56
PTK7-220ENST00000497957 DHX16O60231 1041 aaKnown RBP18.55■□□□□ 0.56
PTK7-220ENST00000497957 ITGBL1O95965 494 aaPredicted RBP18.55■□□□□ 0.56
PTK7-220ENST00000497957 KIF5BP33176 963 aa18.55■□□□□ 0.56
PTK7-220ENST00000497957 SNAP25P60880 206 aa18.55■□□□□ 0.56
PTK7-220ENST00000497957 SPP2Q13103 211 aa18.55■□□□□ 0.56
PTK7-220ENST00000497957 MTMR2Q13614 643 aa18.55■□□□□ 0.56
PTK7-220ENST00000497957 CHADLQ6NUI6 762 aa18.55■□□□□ 0.56
PTK7-220ENST00000497957 VCPKMTQ9H867 229 aa18.55■□□□□ 0.56
PTK7-220ENST00000497957 VAT1LQ9HCJ6 419 aa18.55■□□□□ 0.56
PTK7-220ENST00000497957 PICK1Q9NRD5 415 aa18.55■□□□□ 0.56
PTK7-220ENST00000497957 MTMR6Q9Y217 621 aa18.55■□□□□ 0.56
PTK7-220ENST00000497957 TRIM75PA6NK02 468 aa18.54■□□□□ 0.56
PTK7-220ENST00000497957 PPP1R12BO60237 982 aaPredicted RBP18.54■□□□□ 0.56
PTK7-220ENST00000497957 TAL1P17542 331 aaPredicted RBP18.54■□□□□ 0.56
PTK7-220ENST00000497957 NF2P35240 595 aa18.54■□□□□ 0.56
PTK7-220ENST00000497957 IREB2P48200 963 aaKnown RBP18.54■□□□□ 0.56
PTK7-220ENST00000497957 HMGN5P82970 282 aaKnown RBP18.54■□□□□ 0.56
PTK7-220ENST00000497957 PPP4R3BQ5MIZ7 849 aa18.54■□□□□ 0.56
PTK7-220ENST00000497957 FAM83BQ5T0W9 1011 aa18.54■□□□□ 0.56
PTK7-220ENST00000497957 LARP1BQ659C4 914 aaKnown RBP18.54■□□□□ 0.56
PTK7-220ENST00000497957 DCAF4Q8WV16 495 aa18.54■□□□□ 0.56
PTK7-220ENST00000497957 FEZ1Q99689 392 aa18.54■□□□□ 0.56
PTK7-220ENST00000497957 ALG1Q9BT22 464 aa18.54■□□□□ 0.56
PTK7-220ENST00000497957 EMILIN3Q9NT22 766 aa18.54■□□□□ 0.56
PTK7-220ENST00000497957 BAZ2BQ9UIF8 2168 aaKnown RBP18.54■□□□□ 0.56
PTK7-220ENST00000497957 STK36Q9NRP7 1315 aa18.53■□□□□ 0.56
PTK7-220ENST00000497957 CCDC196A0A1B0GTZ2 297 aa18.53■□□□□ 0.56
PTK7-220ENST00000497957 VPS37CA5D8V6 355 aaPredicted RBP18.53■□□□□ 0.56
PTK7-220ENST00000497957 ADAMTS3O15072 1205 aa18.53■□□□□ 0.56
PTK7-220ENST00000497957 PRPF3O43395 683 aaKnown RBP18.53■□□□□ 0.56
PTK7-220ENST00000497957 CELF2O95319 508 aaKnown RBP18.53■□□□□ 0.56
PTK7-220ENST00000497957 GJA5P36382 358 aa18.53■□□□□ 0.56
PTK7-220ENST00000497957 SLC1A4P43007 532 aa18.53■□□□□ 0.56
PTK7-220ENST00000497957 MAP3K11Q16584 847 aa18.53■□□□□ 0.56
PTK7-220ENST00000497957 ASPRV1Q53RT3 343 aa18.53■□□□□ 0.56
PTK7-220ENST00000497957 CST9Q5W186 159 aa18.53■□□□□ 0.56
PTK7-220ENST00000497957 CPLX2Q6PUV4 134 aaKnown RBP18.53■□□□□ 0.56
PTK7-220ENST00000497957 FAM184AQ8NB25 1140 aa18.53■□□□□ 0.56
PTK7-220ENST00000497957 WDR18Q9BV38 432 aa18.53■□□□□ 0.56
PTK7-220ENST00000497957 GINM1Q9NU53 330 aa18.53■□□□□ 0.56
PTK7-220ENST00000497957 USP17L10C9JJH3 530 aa18.52■□□□□ 0.56
PTK7-220ENST00000497957 STX6O43752 255 aa18.52■□□□□ 0.56
PTK7-220ENST00000497957 CDKL5O76039 1030 aa18.52■□□□□ 0.56
PTK7-220ENST00000497957 BRD1O95696 1058 aa18.52■□□□□ 0.56
PTK7-220ENST00000497957 BMP3P12645 472 aa18.52■□□□□ 0.56
PTK7-220ENST00000497957 LDLRAD1Q5T700 205 aa18.52■□□□□ 0.56
PTK7-220ENST00000497957 ZNF280CQ8ND82 737 aa18.52■□□□□ 0.56
PTK7-220ENST00000497957 GPKOWQ92917 476 aaPredicted RBP eCLIP18.52■□□□□ 0.56
PTK7-220ENST00000497957 GMCL1Q96IK5 515 aa18.52■□□□□ 0.56
PTK7-220ENST00000497957 PIGSQ96S52 555 aa18.52■□□□□ 0.56
PTK7-220ENST00000497957 KIAA1683Q9H0B3 1180 aa18.52■□□□□ 0.56
PTK7-220ENST00000497957 GPBP1L1Q9HC44 474 aaPredicted RBP18.52■□□□□ 0.56
PTK7-220ENST00000497957 FBXO28Q9NVF7 368 aa18.52■□□□□ 0.56
PTK7-220ENST00000497957 CIZ1Q9ULV3 898 aaPredicted RBP18.52■□□□□ 0.56
PTK7-220ENST00000497957 AFG3L2Q9Y4W6 797 aa18.52■□□□□ 0.56
PTK7-220ENST00000497957 MYH6P13533 1939 aa18.52■□□□□ 0.56
PTK7-220ENST00000497957 TMEM232C9JQI7 657 aa18.51■□□□□ 0.55
PTK7-220ENST00000497957 PPP2R5BQ15173 497 aa18.51■□□□□ 0.55
PTK7-220ENST00000497957 ARMC9Q7Z3E5 817 aa18.51■□□□□ 0.55
PTK7-220ENST00000497957 FERMT3Q86UX7 667 aa18.51■□□□□ 0.55
PTK7-220ENST00000497957 HOMER1Q86YM7 354 aa18.51■□□□□ 0.55
PTK7-220ENST00000497957 ADGRF4Q8IZF3 695 aa18.51■□□□□ 0.55
PTK7-220ENST00000497957 OTUD5Q96G74 571 aa18.51■□□□□ 0.55
PTK7-220ENST00000497957 SPZ1Q9BXG8 430 aa18.51■□□□□ 0.55
PTK7-220ENST00000497957 RNF26Q9BY78 433 aaPredicted RBP18.51■□□□□ 0.55
PTK7-220ENST00000497957 RIOX1Q9H6W3 641 aa18.51■□□□□ 0.55
PTK7-220ENST00000497957 JMJD4Q9H9V9 463 aa18.51■□□□□ 0.55
PTK7-220ENST00000497957 GOPCQ9HD26 462 aa18.51■□□□□ 0.55
PTK7-220ENST00000497957 KCNJ14Q9UNX9 436 aa18.51■□□□□ 0.55
PTK7-220ENST00000497957 CSADQ9Y600 493 aa18.51■□□□□ 0.55
PTK7-220ENST00000497957 PPP1R11O60927 126 aaPredicted RBP18.5■□□□□ 0.55
PTK7-220ENST00000497957 GNAQP50148 359 aa18.5■□□□□ 0.55
PTK7-220ENST00000497957 HMGCS2P54868 508 aa18.5■□□□□ 0.55
PTK7-220ENST00000497957 FOXD4L6Q3SYB3 417 aaPredicted RBP18.5■□□□□ 0.55
PTK7-220ENST00000497957 TYW1BQ6NUM6 668 aa18.5■□□□□ 0.55
PTK7-220ENST00000497957 SAMD1Q6SPF0 538 aaPredicted RBP18.5■□□□□ 0.55
PTK7-220ENST00000497957 FOXD4L3Q6VB84 417 aaPredicted RBP18.5■□□□□ 0.55
PTK7-220ENST00000497957 ANKRD13AQ8IZ07 590 aa18.5■□□□□ 0.55
PTK7-220ENST00000497957 C8orf76Q96K31 380 aa18.5■□□□□ 0.55
PTK7-220ENST00000497957 GBA2Q9HCG7 927 aaPredicted RBP18.5■□□□□ 0.55
PTK7-220ENST00000497957 VPS54Q9P1Q0 977 aa18.5■□□□□ 0.55
PTK7-220ENST00000497957 KIF28PB7ZC32 967 aa18.49■□□□□ 0.55
PTK7-220ENST00000497957 DEXIO95424 95 aa18.49■□□□□ 0.55
PTK7-220ENST00000497957 BACE1P56817 501 aa18.49■□□□□ 0.55
PTK7-220ENST00000497957 KRT40Q6A162 431 aa18.49■□□□□ 0.55
PTK7-220ENST00000497957 WWC2Q6AWC2 1192 aa18.49■□□□□ 0.55
PTK7-220ENST00000497957 FAM173BQ6P4H8 233 aa18.49■□□□□ 0.55
PTK7-220ENST00000497957 TRIM22Q8IYM9 498 aa18.49■□□□□ 0.55
PTK7-220ENST00000497957 TNPO1Q92973 898 aaKnown RBP18.49■□□□□ 0.55
PTK7-220ENST00000497957 SYNPO2Q9UMS6 1093 aa18.49■□□□□ 0.55
PTK7-220ENST00000497957 SPDYE5A6NIY4 337 aa18.48■□□□□ 0.55
PTK7-220ENST00000497957 ZSCAN22P10073 491 aaPredicted RBP18.48■□□□□ 0.55
PTK7-220ENST00000497957 SCG2P13521 617 aa18.48■□□□□ 0.55
PTK7-220ENST00000497957 VCAM1P19320 739 aa18.48■□□□□ 0.55
PTK7-220ENST00000497957 PFKFB3Q16875 520 aaPredicted RBP18.48■□□□□ 0.55
PTK7-220ENST00000497957 GPATCH4Q5T3I0 446 aaKnown RBP18.48■□□□□ 0.55
PTK7-220ENST00000497957 SYDE2Q5VT97 1194 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms