RNA–Protein interactions for RNA: ENST00000497703.1

GARNL3-221, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-221ENST00000497703 MRM1Q6IN84 353 aaKnown RBP10.46□□□□□ -0.73
GARNL3-221ENST00000497703 LRRC47Q8N1G4 583 aaKnown RBP10.46□□□□□ -0.73
GARNL3-221ENST00000497703 TRIT1Q9H3H1 467 aaKnown RBP10.46□□□□□ -0.73
GARNL3-221ENST00000497703 PIM2Q9P1W9 311 aa10.46□□□□□ -0.73
GARNL3-221ENST00000497703 NOP56O00567 594 aaKnown RBP10.45□□□□□ -0.74
GARNL3-221ENST00000497703 SSRP1Q08945 709 aaKnown RBP10.45□□□□□ -0.74
GARNL3-221ENST00000497703 FAM214BQ7L5A3 538 aa10.45□□□□□ -0.74
GARNL3-221ENST00000497703 DNAJC7Q99615 494 aa10.45□□□□□ -0.74
GARNL3-221ENST00000497703 DSCC1Q9BVC3 393 aa10.45□□□□□ -0.74
GARNL3-221ENST00000497703 KLHL25Q9H0H3 589 aa10.45□□□□□ -0.74
GARNL3-221ENST00000497703 GP6Q9HCN6 339 aa10.45□□□□□ -0.74
GARNL3-221ENST00000497703 GPATCH2Q9NW75 528 aa10.45□□□□□ -0.74
GARNL3-221ENST00000497703 PRR13Q9NZ81 148 aa10.45□□□□□ -0.74
GARNL3-221ENST00000497703 ZNF451Q9Y4E5 1061 aa10.45□□□□□ -0.74
GARNL3-221ENST00000497703 COL17A1Q9UMD9 1497 aaPredicted RBP10.44□□□□□ -0.74
GARNL3-221ENST00000497703 LRRN2O75325 713 aa10.44□□□□□ -0.74
GARNL3-221ENST00000497703 POMZP3Q6PJE2 187 aa10.44□□□□□ -0.74
GARNL3-221ENST00000497703 SHISA5Q8N114 240 aa10.44□□□□□ -0.74
GARNL3-221ENST00000497703 FGD4Q96M96 766 aa10.44□□□□□ -0.74
GARNL3-221ENST00000497703 CAPN6Q9Y6Q1 641 aa10.44□□□□□ -0.74
GARNL3-221ENST00000497703 TLDC2A0PJX2 215 aa10.43□□□□□ -0.74
GARNL3-221ENST00000497703 CBFA2T2O43439 604 aa10.43□□□□□ -0.74
GARNL3-221ENST00000497703 GRIK1P39086 918 aa10.43□□□□□ -0.74
GARNL3-221ENST00000497703 NMIQ13287 307 aaPredicted RBP10.43□□□□□ -0.74
GARNL3-221ENST00000497703 SLC10A6Q3KNW5 377 aa10.43□□□□□ -0.74
GARNL3-221ENST00000497703 GIMAP6Q6P9H5 292 aa10.43□□□□□ -0.74
GARNL3-221ENST00000497703 FAM181AQ8N9Y4 354 aa10.43□□□□□ -0.74
GARNL3-221ENST00000497703 ENOX1Q8TC92 643 aaKnown RBP10.43□□□□□ -0.74
GARNL3-221ENST00000497703 PRDM14Q9GZV8 571 aa10.43□□□□□ -0.74
GARNL3-221ENST00000497703 PFDN2Q9UHV9 154 aa10.43□□□□□ -0.74
GARNL3-221ENST00000497703 SF3B6Q9Y3B4 125 aaKnown RBP10.43□□□□□ -0.74
GARNL3-221ENST00000497703 CC2D2AQ9P2K1 1620 aa10.43□□□□□ -0.74
GARNL3-221ENST00000497703 KDM2BQ8NHM5 1336 aa10.42□□□□□ -0.74
GARNL3-221ENST00000497703 A0A087WZG4 1122 aa10.42□□□□□ -0.74
GARNL3-221ENST00000497703 PRR33A8MZF0 331 aa10.42□□□□□ -0.74
GARNL3-221ENST00000497703 SMARCA5O60264 1052 aaPredicted RBP10.42□□□□□ -0.74
GARNL3-221ENST00000497703 CEACAM5P06731 702 aa10.42□□□□□ -0.74
GARNL3-221ENST00000497703 OXCT1P55809 520 aa10.42□□□□□ -0.74
GARNL3-221ENST00000497703 TNK2Q07912 1038 aa10.42□□□□□ -0.74
GARNL3-221ENST00000497703 LRRN4CLQ8ND94 238 aa10.42□□□□□ -0.74
GARNL3-221ENST00000497703 SGSM3Q96HU1 749 aa10.42□□□□□ -0.74
GARNL3-221ENST00000497703 Q96M66 194 aa10.42□□□□□ -0.74
GARNL3-221ENST00000497703 GFOD1Q9NXC2 390 aa10.42□□□□□ -0.74
GARNL3-221ENST00000497703 FHOD1Q9Y613 1164 aa10.42□□□□□ -0.74
GARNL3-221ENST00000497703 CNTNAP4Q9C0A0 1308 aa10.41□□□□□ -0.74
GARNL3-221ENST00000497703 SIGLEC6O43699 453 aa10.41□□□□□ -0.74
GARNL3-221ENST00000497703 CLCN7P51798 805 aa10.41□□□□□ -0.74
GARNL3-221ENST00000497703 IFI16Q16666 785 aaKnown RBP10.41□□□□□ -0.74
GARNL3-221ENST00000497703 CDKAL1Q5VV42 579 aa10.41□□□□□ -0.74
GARNL3-221ENST00000497703 CWF19L1Q69YN2 538 aaKnown RBP10.41□□□□□ -0.74
GARNL3-221ENST00000497703 ZDHHC13Q8IUH4 622 aa10.41□□□□□ -0.74
GARNL3-221ENST00000497703 BVESQ8NE79 360 aa10.41□□□□□ -0.74
GARNL3-221ENST00000497703 ADCY4Q8NFM4 1077 aa10.41□□□□□ -0.74
GARNL3-221ENST00000497703 NETO1Q8TDF5 533 aa10.41□□□□□ -0.74
GARNL3-221ENST00000497703 CHST7Q9NS84 486 aa10.41□□□□□ -0.74
GARNL3-221ENST00000497703 ZMYM5Q9UJ78 669 aa10.41□□□□□ -0.74
GARNL3-221ENST00000497703 AKT3Q9Y243 479 aa10.41□□□□□ -0.74
GARNL3-221ENST00000497703 DIS3Q9Y2L1 958 aaKnown RBP10.41□□□□□ -0.74
GARNL3-221ENST00000497703 CLSTN1O94985 981 aa10.4□□□□□ -0.74
GARNL3-221ENST00000497703 FOSL1P15407 271 aa10.4□□□□□ -0.74
GARNL3-221ENST00000497703 SYTL5Q8TDW5 730 aaPredicted RBP10.4□□□□□ -0.74
GARNL3-221ENST00000497703 BRF1Q92994 677 aa10.4□□□□□ -0.74
GARNL3-221ENST00000497703 RCC1LQ96I51 464 aaKnown RBP10.4□□□□□ -0.74
GARNL3-221ENST00000497703 IPO9Q96P70 1041 aaKnown RBP10.4□□□□□ -0.74
GARNL3-221ENST00000497703 GPR62Q9BZJ7 368 aa10.4□□□□□ -0.74
GARNL3-221ENST00000497703 NOL6Q9H6R4 1146 aaKnown RBP10.4□□□□□ -0.74
GARNL3-221ENST00000497703 TMEM265A0A087WTH1 108 aa10.39□□□□□ -0.75
GARNL3-221ENST00000497703 SHOXO15266 292 aa10.39□□□□□ -0.75
GARNL3-221ENST00000497703 FURINP09958 794 aa10.39□□□□□ -0.75
GARNL3-221ENST00000497703 ZNF445P59923 1031 aa10.39□□□□□ -0.75
GARNL3-221ENST00000497703 SPATC1Q76KD6 591 aa10.39□□□□□ -0.75
GARNL3-221ENST00000497703 FIBCD1Q8N539 461 aa10.39□□□□□ -0.75
GARNL3-221ENST00000497703 THAP3Q8WTV1 239 aaPredicted RBP10.39□□□□□ -0.75
GARNL3-221ENST00000497703 SPATA9Q9BWV2 254 aa10.39□□□□□ -0.75
GARNL3-221ENST00000497703 SEMA6BQ9H3T3 888 aa10.39□□□□□ -0.75
GARNL3-221ENST00000497703 SUSD2Q9UGT4 822 aa10.39□□□□□ -0.75
GARNL3-221ENST00000497703 PRAMEF1O95521 474 aa10.38□□□□□ -0.75
GARNL3-221ENST00000497703 CANXP27824 592 aaKnown RBP10.38□□□□□ -0.75
GARNL3-221ENST00000497703 SNW1Q13573 536 aaKnown RBP10.38□□□□□ -0.75
GARNL3-221ENST00000497703 HSP90AA2PQ14568 343 aaPredicted RBP10.38□□□□□ -0.75
GARNL3-221ENST00000497703 PPP2R5DQ14738 602 aa10.38□□□□□ -0.75
GARNL3-221ENST00000497703 TMC3Q7Z5M5 1100 aa10.38□□□□□ -0.75
GARNL3-221ENST00000497703 THAP5Q7Z6K1 395 aa10.38□□□□□ -0.75
GARNL3-221ENST00000497703 ZNF655Q8N720 491 aaPredicted RBP10.38□□□□□ -0.75
GARNL3-221ENST00000497703 SNX11Q9Y5W9 270 aa10.38□□□□□ -0.75
GARNL3-221ENST00000497703 SSU72P8A0A1W2PR75 194 aa10.37□□□□□ -0.75
GARNL3-221ENST00000497703 LOC105371045A0A1W2PR82 267 aa10.37□□□□□ -0.75
GARNL3-221ENST00000497703 MEIS1O00470 390 aa10.37□□□□□ -0.75
GARNL3-221ENST00000497703 ZC3H12BQ5HYM0 836 aaKnown RBP10.37□□□□□ -0.75
GARNL3-221ENST00000497703 PRSS36Q5K4E3 855 aa10.37□□□□□ -0.75
GARNL3-221ENST00000497703 DAGLBQ8NCG7 672 aa10.37□□□□□ -0.75
GARNL3-221ENST00000497703 SH3TC2Q8TF17 1288 aa10.37□□□□□ -0.75
GARNL3-221ENST00000497703 BICRAQ9NZM4 1560 aa10.37□□□□□ -0.75
GARNL3-221ENST00000497703 APEX2Q9UBZ4 518 aa10.37□□□□□ -0.75
GARNL3-221ENST00000497703 MRPL42Q9Y6G3 142 aaKnown RBP10.37□□□□□ -0.75
GARNL3-221ENST00000497703 H3BS24 57 aa10.36□□□□□ -0.75
GARNL3-221ENST00000497703 GSNP06396 782 aa10.36□□□□□ -0.75
GARNL3-221ENST00000497703 POU4F1Q01851 419 aa10.36□□□□□ -0.75
GARNL3-221ENST00000497703 NKPD1Q17RQ9 610 aa10.36□□□□□ -0.75
GARNL3-221ENST00000497703 C2orf27AQ580R0 203 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms