RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 ATP11AP98196 1134 aa5.89□□□□□ -1.47
CMSS1-209ENST00000497345 ATP8B2P98198 1209 aa5.89□□□□□ -1.47
CMSS1-209ENST00000497345 GCKRQ14397 625 aa5.89□□□□□ -1.47
CMSS1-209ENST00000497345 EPHA10Q5JZY3 1008 aa5.89□□□□□ -1.47
CMSS1-209ENST00000497345 FAM196AQ6ZSG2 479 aa5.89□□□□□ -1.47
CMSS1-209ENST00000497345 RPAP2Q8IXW5 612 aaPredicted RBP5.89□□□□□ -1.47
CMSS1-209ENST00000497345 C16orf71Q8IYS4 520 aaPredicted RBP5.89□□□□□ -1.47
CMSS1-209ENST00000497345 GALNT11Q8NCW6 608 aa5.89□□□□□ -1.47
CMSS1-209ENST00000497345 LACRTQ9GZZ8 138 aa5.89□□□□□ -1.47
CMSS1-209ENST00000497345 BICC1Q9H694 974 aaKnown RBP5.89□□□□□ -1.47
CMSS1-209ENST00000497345 CWC25Q9NXE8 425 aaPredicted RBP5.89□□□□□ -1.47
CMSS1-209ENST00000497345 ABI2Q9NYB9 513 aaPredicted RBP5.89□□□□□ -1.47
CMSS1-209ENST00000497345 RGS17Q9UGC6 210 aaPredicted RBP5.89□□□□□ -1.47
CMSS1-209ENST00000497345 SEPT3Q9UH03 358 aa5.89□□□□□ -1.47
CMSS1-209ENST00000497345 SRP68Q9UHB9 627 aaKnown RBP5.89□□□□□ -1.47
CMSS1-209ENST00000497345 PA2G4Q9UQ80 394 aaKnown RBP5.89□□□□□ -1.47
CMSS1-209ENST00000497345 BTAF1O14981 1849 aa5.89□□□□□ -1.47
CMSS1-209ENST00000497345 AFDNP55196 1824 aaKnown RBP5.89□□□□□ -1.47
CMSS1-209ENST00000497345 HMMRO75330 724 aa5.88□□□□□ -1.47
CMSS1-209ENST00000497345 KIF4AO95239 1232 aa5.88□□□□□ -1.47
CMSS1-209ENST00000497345 CYP2E1P05181 493 aaPredicted RBP5.88□□□□□ -1.47
CMSS1-209ENST00000497345 CDC27P30260 824 aa5.88□□□□□ -1.47
CMSS1-209ENST00000497345 TCIRG1Q13488 830 aa5.88□□□□□ -1.47
CMSS1-209ENST00000497345 SLC51AQ86UW1 340 aa5.88□□□□□ -1.47
CMSS1-209ENST00000497345 CHD1LQ86WJ1 897 aa5.88□□□□□ -1.47
CMSS1-209ENST00000497345 SYNE4Q8N205 404 aa5.88□□□□□ -1.47
CMSS1-209ENST00000497345 KLHDC4Q8TBB5 520 aa5.88□□□□□ -1.47
CMSS1-209ENST00000497345 OTUD7AQ8TE49 926 aaPredicted RBP5.88□□□□□ -1.47
CMSS1-209ENST00000497345 SIL1Q9H173 461 aa5.88□□□□□ -1.47
CMSS1-209ENST00000497345 RASSF4Q9H2L5 321 aa5.88□□□□□ -1.47
CMSS1-209ENST00000497345 IL1RAPL2Q9NP60 686 aa5.88□□□□□ -1.47
CMSS1-209ENST00000497345 RNF112Q9ULX5 631 aa5.88□□□□□ -1.47
CMSS1-209ENST00000497345 MAP3K15Q6ZN16 1313 aa5.88□□□□□ -1.47
CMSS1-209ENST00000497345 ATP10DQ9P241 1426 aa5.88□□□□□ -1.47
CMSS1-209ENST00000497345 ARFGEF2Q9Y6D5 1785 aa5.88□□□□□ -1.47
CMSS1-209ENST00000497345 CD68P34810 354 aaPredicted RBP5.87□□□□□ -1.47
CMSS1-209ENST00000497345 IL6STP40189 918 aaPredicted RBP5.87□□□□□ -1.47
CMSS1-209ENST00000497345 NUCB1Q02818 461 aa5.87□□□□□ -1.47
CMSS1-209ENST00000497345 TSHZ3Q63HK5 1081 aa5.87□□□□□ -1.47
CMSS1-209ENST00000497345 PDE12Q6L8Q7 609 aaKnown RBP5.87□□□□□ -1.47
CMSS1-209ENST00000497345 TXNDC11Q6PKC3 985 aa5.87□□□□□ -1.47
CMSS1-209ENST00000497345 Q6ZS46 218 aa5.87□□□□□ -1.47
CMSS1-209ENST00000497345 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.87□□□□□ -1.47
CMSS1-209ENST00000497345 ATCAYQ86WG3 371 aa5.87□□□□□ -1.47
CMSS1-209ENST00000497345 NCAPG2Q86XI2 1143 aa5.87□□□□□ -1.47
CMSS1-209ENST00000497345 SMC5Q8IY18 1101 aa5.87□□□□□ -1.47
CMSS1-209ENST00000497345 AGGF1Q8N302 714 aaeCLIP5.87□□□□□ -1.47
CMSS1-209ENST00000497345 CEP120Q8N960 986 aa5.87□□□□□ -1.47
CMSS1-209ENST00000497345 GCC1Q96CN9 775 aa5.87□□□□□ -1.47
CMSS1-209ENST00000497345 FAM89AQ96GI7 184 aa5.87□□□□□ -1.47
CMSS1-209ENST00000497345 PBX4Q9BYU1 374 aa5.87□□□□□ -1.47
CMSS1-209ENST00000497345 DCTPP1Q9H773 170 aa5.87□□□□□ -1.47
CMSS1-209ENST00000497345 ELP3Q9H9T3 547 aa5.87□□□□□ -1.47
CMSS1-209ENST00000497345 TMEM63CQ9P1W3 806 aa5.87□□□□□ -1.47
CMSS1-209ENST00000497345 TRMT112Q9UI30 125 aaKnown RBP5.87□□□□□ -1.47
CMSS1-209ENST00000497345 PXDNLA1KZ92 1463 aa5.87□□□□□ -1.47
CMSS1-209ENST00000497345 NHSQ6T4R5 1651 aa5.86□□□□□ -1.47
CMSS1-209ENST00000497345 TM4SF5O14894 197 aa5.86□□□□□ -1.47
CMSS1-209ENST00000497345 RPLP1P05386 114 aaKnown RBP5.86□□□□□ -1.47
CMSS1-209ENST00000497345 HCLS1P14317 486 aaPredicted RBP5.86□□□□□ -1.47
CMSS1-209ENST00000497345 GLB1P16278 677 aa5.86□□□□□ -1.47
CMSS1-209ENST00000497345 EIF5P55010 431 aaKnown RBP5.86□□□□□ -1.47
CMSS1-209ENST00000497345 SUSD4Q5VX71 490 aa5.86□□□□□ -1.47
CMSS1-209ENST00000497345 USPL1Q5W0Q7 1092 aa5.86□□□□□ -1.47
CMSS1-209ENST00000497345 LMBR1LQ6UX01 489 aa5.86□□□□□ -1.47
CMSS1-209ENST00000497345 XKR5Q6UX68 686 aa5.86□□□□□ -1.47
CMSS1-209ENST00000497345 ADAMTSL4Q6UY14 1074 aa5.86□□□□□ -1.47
CMSS1-209ENST00000497345 ZNF438Q7Z4V0 828 aa5.86□□□□□ -1.47
CMSS1-209ENST00000497345 NLRP10Q86W26 655 aa5.86□□□□□ -1.47
CMSS1-209ENST00000497345 AMIGO3Q86WK7 504 aa5.86□□□□□ -1.47
CMSS1-209ENST00000497345 KAZALD1Q96I82 304 aa5.86□□□□□ -1.47
CMSS1-209ENST00000497345 UBL7Q96S82 380 aaPredicted RBP5.86□□□□□ -1.47
CMSS1-209ENST00000497345 ISCA1Q9BUE6 129 aa5.86□□□□□ -1.47
CMSS1-209ENST00000497345 ADAM19Q9H013 955 aa5.86□□□□□ -1.47
CMSS1-209ENST00000497345 SH2B1Q9NRF2 756 aaPredicted RBP5.86□□□□□ -1.47
CMSS1-209ENST00000497345 CNTN3Q9P232 1028 aa5.86□□□□□ -1.47
CMSS1-209ENST00000497345 NIP7Q9Y221 180 aaKnown RBP eCLIP5.86□□□□□ -1.47
CMSS1-209ENST00000497345 SBF2Q86WG5 1849 aa5.85□□□□□ -1.47
CMSS1-209ENST00000497345 NUP188Q5SRE5 1749 aa5.85□□□□□ -1.47
CMSS1-209ENST00000497345 COL15A1P39059 1388 aa5.85□□□□□ -1.47
CMSS1-209ENST00000497345 FSCN2O14926 492 aa5.85□□□□□ -1.47
CMSS1-209ENST00000497345 NPHP1O15259 732 aa5.85□□□□□ -1.47
CMSS1-209ENST00000497345 RPS6KA4O75676 772 aa5.85□□□□□ -1.47
CMSS1-209ENST00000497345 CAMTA2O94983 1202 aa5.85□□□□□ -1.47
CMSS1-209ENST00000497345 MAP4K4O95819 1239 aaPredicted RBP5.85□□□□□ -1.47
CMSS1-209ENST00000497345 FSTP19883 344 aa5.85□□□□□ -1.47
CMSS1-209ENST00000497345 CDC25BP30305 580 aa5.85□□□□□ -1.47
CMSS1-209ENST00000497345 RFC4P35249 363 aa5.85□□□□□ -1.47
CMSS1-209ENST00000497345 FOXO4P98177 505 aa5.85□□□□□ -1.47
CMSS1-209ENST00000497345 G3BP1Q13283 466 aaKnown RBP eCLIP5.85□□□□□ -1.47
CMSS1-209ENST00000497345 TXNRD1Q16881 649 aa5.85□□□□□ -1.47
CMSS1-209ENST00000497345 HSP90AB3PQ58FF7 597 aa5.85□□□□□ -1.47
CMSS1-209ENST00000497345 TAF7LQ5H9L4 462 aa5.85□□□□□ -1.47
CMSS1-209ENST00000497345 FAM117BQ6P1L5 589 aa5.85□□□□□ -1.47
CMSS1-209ENST00000497345 KLHL23Q8NBE8 558 aa5.85□□□□□ -1.47
CMSS1-209ENST00000497345 CCDC191Q8NCU4 936 aa5.85□□□□□ -1.47
CMSS1-209ENST00000497345 SSH3Q8TE77 659 aa5.85□□□□□ -1.47
CMSS1-209ENST00000497345 EDEM1Q92611 657 aa5.85□□□□□ -1.47
CMSS1-209ENST00000497345 POP1Q99575 1024 aaKnown RBP5.85□□□□□ -1.47
CMSS1-209ENST00000497345 UTP14AQ9BVJ6 771 aaKnown RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms