RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 DHX38Q92620 1227 aaKnown RBP6.17□□□□□ -1.42
SMC4-225ENST00000497203 ZNF512BQ96KM6 892 aaPredicted RBP6.17□□□□□ -1.42
SMC4-225ENST00000497203 GPR62Q9BZJ7 368 aa6.17□□□□□ -1.42
SMC4-225ENST00000497203 SHROOM4Q9ULL8 1493 aa6.16□□□□□ -1.42
SMC4-225ENST00000497203 CLEC3AO75596 197 aa6.16□□□□□ -1.42
SMC4-225ENST00000497203 ESR1P03372 595 aa6.16□□□□□ -1.42
SMC4-225ENST00000497203 C8AP07357 584 aa6.16□□□□□ -1.42
SMC4-225ENST00000497203 TPP2P29144 1249 aaPredicted RBP6.16□□□□□ -1.42
SMC4-225ENST00000497203 GAB4Q2WGN9 574 aa6.16□□□□□ -1.42
SMC4-225ENST00000497203 SLC23A3Q6PIS1 610 aa6.16□□□□□ -1.42
SMC4-225ENST00000497203 LSRQ86X29 649 aaPredicted RBP6.16□□□□□ -1.42
SMC4-225ENST00000497203 CPLX3Q8WVH0 158 aa6.16□□□□□ -1.42
SMC4-225ENST00000497203 SLC6A18Q96N87 628 aa6.16□□□□□ -1.42
SMC4-225ENST00000497203 LMCD1Q9NZU5 365 aa6.16□□□□□ -1.42
SMC4-225ENST00000497203 RNF4P78317 190 aa6.15□□□□□ -1.42
SMC4-225ENST00000497203 RBL2Q08999 1139 aa6.15□□□□□ -1.42
SMC4-225ENST00000497203 SNW1Q13573 536 aaKnown RBP6.15□□□□□ -1.42
SMC4-225ENST00000497203 ZYXQ15942 572 aaKnown RBP6.15□□□□□ -1.42
SMC4-225ENST00000497203 INTS3Q68E01 1043 aaKnown RBP6.15□□□□□ -1.42
SMC4-225ENST00000497203 TSPYL5Q86VY4 417 aaPredicted RBP6.15□□□□□ -1.42
SMC4-225ENST00000497203 CKAP2LQ8IYA6 745 aa6.15□□□□□ -1.42
SMC4-225ENST00000497203 LRRN4CLQ8ND94 238 aa6.15□□□□□ -1.42
SMC4-225ENST00000497203 DNAJC2Q99543 621 aaKnown RBP6.15□□□□□ -1.42
SMC4-225ENST00000497203 TM9SF2Q99805 663 aa6.15□□□□□ -1.42
SMC4-225ENST00000497203 SRRTQ9BXP5 876 aaKnown RBP6.15□□□□□ -1.42
SMC4-225ENST00000497203 TRIT1Q9H3H1 467 aaKnown RBP6.15□□□□□ -1.42
SMC4-225ENST00000497203 RC3H2Q9HBD1 1191 aaKnown RBP6.15□□□□□ -1.42
SMC4-225ENST00000497203 GPATCH2Q9NW75 528 aa6.15□□□□□ -1.42
SMC4-225ENST00000497203 KRTAP9-7A8MTY7 169 aa6.14□□□□□ -1.43
SMC4-225ENST00000497203 NBPF9Q3BBW0 867 aa6.14□□□□□ -1.43
SMC4-225ENST00000497203 TMPRSS7Q7RTY8 843 aa6.14□□□□□ -1.43
SMC4-225ENST00000497203 CREG2Q8IUH2 290 aa6.14□□□□□ -1.43
SMC4-225ENST00000497203 TAB3Q8N5C8 712 aaPredicted RBP6.14□□□□□ -1.43
SMC4-225ENST00000497203 CRBNQ96SW2 442 aa6.14□□□□□ -1.43
SMC4-225ENST00000497203 ITGB5P18084 799 aa6.13□□□□□ -1.43
SMC4-225ENST00000497203 GUCY2CP25092 1073 aa6.13□□□□□ -1.43
SMC4-225ENST00000497203 GIPRP48546 466 aa6.13□□□□□ -1.43
SMC4-225ENST00000497203 EIF6P56537 245 aaKnown RBP6.13□□□□□ -1.43
SMC4-225ENST00000497203 NMIQ13287 307 aaPredicted RBP6.13□□□□□ -1.43
SMC4-225ENST00000497203 NBPF6Q5VWK0 638 aa6.13□□□□□ -1.43
SMC4-225ENST00000497203 UNC5AQ6ZN44 842 aa6.13□□□□□ -1.43
SMC4-225ENST00000497203 TMC3Q7Z5M5 1100 aa6.13□□□□□ -1.43
SMC4-225ENST00000497203 OR6P1Q8NGX9 317 aa6.13□□□□□ -1.43
SMC4-225ENST00000497203 SHDQ96IW2 340 aa6.13□□□□□ -1.43
SMC4-225ENST00000497203 NBPF4Q96M43 638 aa6.13□□□□□ -1.43
SMC4-225ENST00000497203 DUSP13Q9UII6 198 aa6.13□□□□□ -1.43
SMC4-225ENST00000497203 C9IYK1 514 aa6.12□□□□□ -1.43
SMC4-225ENST00000497203 CLEC16AQ2KHT3 1053 aa6.12□□□□□ -1.43
SMC4-225ENST00000497203 TNNI3KQ59H18 835 aa6.12□□□□□ -1.43
SMC4-225ENST00000497203 TDRD10Q5VZ19 366 aaKnown RBP6.12□□□□□ -1.43
SMC4-225ENST00000497203 DHRS1Q96LJ7 313 aa6.12□□□□□ -1.43
SMC4-225ENST00000497203 PRDM14Q9GZV8 571 aa6.12□□□□□ -1.43
SMC4-225ENST00000497203 MKRN2Q9H000 416 aaKnown RBP6.12□□□□□ -1.43
SMC4-225ENST00000497203 SUCOQ9UBS9 1254 aaKnown RBP6.12□□□□□ -1.43
SMC4-225ENST00000497203 R3HCC1Q9Y3T6 440 aaKnown RBP6.12□□□□□ -1.43
SMC4-225ENST00000497203 PCDHA11Q9Y5I1 949 aa6.12□□□□□ -1.43
SMC4-225ENST00000497203 LTBP3Q9NS15 1303 aa6.11□□□□□ -1.43
SMC4-225ENST00000497203 PAPLNO95428 1278 aa6.11□□□□□ -1.43
SMC4-225ENST00000497203 PMS1P54277 932 aaKnown RBP6.11□□□□□ -1.43
SMC4-225ENST00000497203 EGR3Q06889 387 aa6.11□□□□□ -1.43
SMC4-225ENST00000497203 DPH6Q7L8W6 267 aa6.11□□□□□ -1.43
SMC4-225ENST00000497203 TTC6Q86TZ1 520 aa6.11□□□□□ -1.43
SMC4-225ENST00000497203 PPFIBP1Q86W92 1011 aa6.11□□□□□ -1.43
SMC4-225ENST00000497203 FAM169BQ8N8A8 192 aa6.11□□□□□ -1.43
SMC4-225ENST00000497203 PMFBP1Q8TBY8 1022 aa6.11□□□□□ -1.43
SMC4-225ENST00000497203 ASIC4Q96FT7 647 aa6.11□□□□□ -1.43
SMC4-225ENST00000497203 ALPK1Q96QP1 1244 aa6.11□□□□□ -1.43
SMC4-225ENST00000497203 HDAC8Q9BY41 377 aa6.11□□□□□ -1.43
SMC4-225ENST00000497203 ASCC2Q9H1I8 757 aaPredicted RBP6.11□□□□□ -1.43
SMC4-225ENST00000497203 ZNF408Q9H9D4 720 aa6.11□□□□□ -1.43
SMC4-225ENST00000497203 C19orf73Q9NVV2 129 aa6.11□□□□□ -1.43
SMC4-225ENST00000497203 SLAMF8Q9P0V8 285 aa6.11□□□□□ -1.43
SMC4-225ENST00000497203 MINPP1Q9UNW1 487 aa6.11□□□□□ -1.43
SMC4-225ENST00000497203 CTNND2Q9UQB3 1225 aa6.11□□□□□ -1.43
SMC4-225ENST00000497203 DNAJC25-GNG10A0A024R161 153 aa6.1□□□□□ -1.43
SMC4-225ENST00000497203 LTKP29376 864 aa6.1□□□□□ -1.43
SMC4-225ENST00000497203 AUHQ13825 339 aaKnown RBP6.1□□□□□ -1.43
SMC4-225ENST00000497203 RALGPS1Q5JS13 557 aa6.1□□□□□ -1.43
SMC4-225ENST00000497203 ATG4DQ86TL0 474 aaPredicted RBP6.1□□□□□ -1.43
SMC4-225ENST00000497203 CCDC144CPQ8IYA2 1237 aa6.1□□□□□ -1.43
SMC4-225ENST00000497203 FLAD1Q8NFF5 587 aa6.1□□□□□ -1.43
SMC4-225ENST00000497203 ENOX1Q8TC92 643 aaKnown RBP6.1□□□□□ -1.43
SMC4-225ENST00000497203 SYTL5Q8TDW5 730 aaPredicted RBP6.1□□□□□ -1.43
SMC4-225ENST00000497203 ANAPC16Q96DE5 110 aa6.1□□□□□ -1.43
SMC4-225ENST00000497203 LNPKQ9C0E8 428 aa6.1□□□□□ -1.43
SMC4-225ENST00000497203 FAM86C1Q9NVL1 165 aa6.1□□□□□ -1.43
SMC4-225ENST00000497203 PRKAG3Q9UGI9 489 aa6.1□□□□□ -1.43
SMC4-225ENST00000497203 A0A1W2PQH9 124 aa6.09□□□□□ -1.43
SMC4-225ENST00000497203 LOC105371045A0A1W2PR82 267 aa6.09□□□□□ -1.43
SMC4-225ENST00000497203 SHOXO15266 292 aa6.09□□□□□ -1.43
SMC4-225ENST00000497203 PRAMEF1O95521 474 aa6.09□□□□□ -1.43
SMC4-225ENST00000497203 TP53P04637 393 aaPredicted RBP6.09□□□□□ -1.43
SMC4-225ENST00000497203 JUNBP17275 347 aaPredicted RBP6.09□□□□□ -1.43
SMC4-225ENST00000497203 ETFBP38117 255 aa6.09□□□□□ -1.43
SMC4-225ENST00000497203 AXDND1Q5T1B0 1012 aaPredicted RBP6.09□□□□□ -1.43
SMC4-225ENST00000497203 ANKS3Q6ZW76 656 aa6.09□□□□□ -1.43
SMC4-225ENST00000497203 DAGLBQ8NCG7 672 aa6.09□□□□□ -1.43
SMC4-225ENST00000497203 TCTN2Q96GX1 697 aa6.09□□□□□ -1.43
SMC4-225ENST00000497203 ADAMTS10Q9H324 1103 aa6.09□□□□□ -1.43
SMC4-225ENST00000497203 GFOD1Q9NXC2 390 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms