RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 PRKG1Q13976 671 aa19.52■□□□□ 0.72
LMNA-216ENST00000496738 TTBK2Q6IQ55 1244 aa19.52■□□□□ 0.72
LMNA-216ENST00000496738 HOMER1Q86YM7 354 aa19.52■□□□□ 0.72
LMNA-216ENST00000496738 GPKOWQ92917 476 aaPredicted RBP eCLIP19.52■□□□□ 0.721e-9■■■■□ 23.2
LMNA-216ENST00000496738 L3MBTL3Q96JM7 780 aaPredicted RBP19.52■□□□□ 0.72
LMNA-216ENST00000496738 TFIP11Q9UBB9 837 aaKnown RBP19.52■□□□□ 0.72
LMNA-216ENST00000496738 SNHG28P0DPA3 235 aa19.52■□□□□ 0.71
LMNA-216ENST00000496738 EPHX2P34913 555 aa19.52■□□□□ 0.71
LMNA-216ENST00000496738 KIF23Q02241 960 aaPredicted RBP19.52■□□□□ 0.71
LMNA-216ENST00000496738 ZYXQ15942 572 aaKnown RBP19.52■□□□□ 0.71
LMNA-216ENST00000496738 SLFN13Q68D06 897 aa19.52■□□□□ 0.71
LMNA-216ENST00000496738 MKL1Q969V6 931 aa19.52■□□□□ 0.71
LMNA-216ENST00000496738 NUP88Q99567 741 aaPredicted RBP19.52■□□□□ 0.71
LMNA-216ENST00000496738 ZSCAN16Q9H4T2 348 aaPredicted RBP19.52■□□□□ 0.71
LMNA-216ENST00000496738 SLC16A2P36021 539 aa19.51■□□□□ 0.71
LMNA-216ENST00000496738 ZNF543Q08ER8 600 aa19.51■□□□□ 0.71
LMNA-216ENST00000496738 GNL2Q13823 731 aaKnown RBP19.51■□□□□ 0.71
LMNA-216ENST00000496738 ASPRV1Q53RT3 343 aa19.51■□□□□ 0.71
LMNA-216ENST00000496738 SPICE1Q8N0Z3 855 aa19.51■□□□□ 0.71
LMNA-216ENST00000496738 DCPSQ96C86 337 aaKnown RBP19.51■□□□□ 0.71
LMNA-216ENST00000496738 GLIS2Q9BZE0 524 aaPredicted RBP19.51■□□□□ 0.71
LMNA-216ENST00000496738 POLR2AP24928 1970 aaKnown RBP19.51■□□□□ 0.71
LMNA-216ENST00000496738 SCG2P13521 617 aa19.51■□□□□ 0.71
LMNA-216ENST00000496738 INPP5BP32019 993 aa19.51■□□□□ 0.71
LMNA-216ENST00000496738 EAPPQ56P03 285 aaPredicted RBP19.51■□□□□ 0.71
LMNA-216ENST00000496738 TCHHQ07283 1943 aa19.5■□□□□ 0.71
LMNA-216ENST00000496738 ATAD5Q96QE3 1844 aa19.5■□□□□ 0.71
LMNA-216ENST00000496738 SSC5DA1L4H1 1573 aa19.5■□□□□ 0.71
LMNA-216ENST00000496738 F5H6K3 240 aa19.5■□□□□ 0.71
LMNA-216ENST00000496738 SLC1A4P43007 532 aa19.5■□□□□ 0.71
LMNA-216ENST00000496738 CEBPZQ03701 1054 aaKnown RBP19.5■□□□□ 0.71
LMNA-216ENST00000496738 KLRC3Q07444 240 aa19.5■□□□□ 0.71
LMNA-216ENST00000496738 PFKFB3Q16875 520 aaPredicted RBP19.5■□□□□ 0.71
LMNA-216ENST00000496738 LZTS2Q9BRK4 669 aa19.5■□□□□ 0.71
LMNA-216ENST00000496738 FTOQ9C0B1 505 aaKnown RBP eCLIP19.5■□□□□ 0.71
LMNA-216ENST00000496738 ARHGEF10LQ9HCE6 1279 aa19.5■□□□□ 0.71
LMNA-216ENST00000496738 MMP1P03956 469 aa19.5■□□□□ 0.71
LMNA-216ENST00000496738 DCAF15Q66K64 600 aa19.5■□□□□ 0.71
LMNA-216ENST00000496738 PIGSQ96S52 555 aa19.5■□□□□ 0.71
LMNA-216ENST00000496738 NDUFB10O96000 172 aa19.49■□□□□ 0.71
LMNA-216ENST00000496738 USP48Q86UV5 1035 aa19.49■□□□□ 0.71
LMNA-216ENST00000496738 SPZ1Q9BXG8 430 aa19.49■□□□□ 0.71
LMNA-216ENST00000496738 LMBRD1Q9NUN5 540 aa19.49■□□□□ 0.71
LMNA-216ENST00000496738 PITPNM2Q9BZ72 1349 aa19.49■□□□□ 0.71
LMNA-216ENST00000496738 ZC3H4Q9UPT8 1303 aaKnown RBP19.49■□□□□ 0.71
LMNA-216ENST00000496738 BTBD18B2RXH4 712 aa19.49■□□□□ 0.71
LMNA-216ENST00000496738 ASNSP08243 561 aa19.49■□□□□ 0.71
LMNA-216ENST00000496738 KIAA1755Q5JYT7 1200 aa19.49■□□□□ 0.71
LMNA-216ENST00000496738 HEATR3Q7Z4Q2 680 aa19.49■□□□□ 0.71
LMNA-216ENST00000496738 SULF1Q8IWU6 871 aa19.49■□□□□ 0.71
LMNA-216ENST00000496738 DIS3L2Q8IYB7 885 aaKnown RBP19.49■□□□□ 0.71
LMNA-216ENST00000496738 OXER1Q8TDS5 423 aa19.49■□□□□ 0.71
LMNA-216ENST00000496738 ZKSCAN4Q969J2 545 aaPredicted RBP19.49■□□□□ 0.71
LMNA-216ENST00000496738 WRNIP1Q96S55 665 aa19.49■□□□□ 0.71
LMNA-216ENST00000496738 ZNF341Q9BYN7 854 aa19.49■□□□□ 0.71
LMNA-216ENST00000496738 XBP1P17861 261 aa19.48■□□□□ 0.71
LMNA-216ENST00000496738 KRT85P78386 507 aa19.48■□□□□ 0.71
LMNA-216ENST00000496738 GMCL1P1Q8NEA9 526 aa19.48■□□□□ 0.71
LMNA-216ENST00000496738 PPP2R3BQ9Y5P8 575 aa19.48■□□□□ 0.71
LMNA-216ENST00000496738 MYH15Q9Y2K3 1946 aa19.48■□□□□ 0.71
LMNA-216ENST00000496738 POTECB2RU33 542 aa19.47■□□□□ 0.71
LMNA-216ENST00000496738 NR5A1Q13285 461 aa19.47■□□□□ 0.71
LMNA-216ENST00000496738 WWC2Q6AWC2 1192 aa19.47■□□□□ 0.71
LMNA-216ENST00000496738 KRT26Q7Z3Y9 468 aa19.47■□□□□ 0.71
LMNA-216ENST00000496738 DCAF4Q8WV16 495 aa19.47■□□□□ 0.71
LMNA-216ENST00000496738 RRP36Q96EU6 259 aaKnown RBP19.47■□□□□ 0.71
LMNA-216ENST00000496738 SAFBQ15424 915 aaKnown RBP eCLIP19.47■□□□□ 0.71
LMNA-216ENST00000496738 USP50Q70EL3 339 aaPredicted RBP19.47■□□□□ 0.71
LMNA-216ENST00000496738 ADGRF4Q8IZF3 695 aa19.47■□□□□ 0.71
LMNA-216ENST00000496738 PHF20Q9BVI0 1012 aa19.47■□□□□ 0.71
LMNA-216ENST00000496738 TAF1DQ9H5J8 278 aaPredicted RBP19.47■□□□□ 0.71
LMNA-216ENST00000496738 TMX2Q9Y320 296 aa19.47■□□□□ 0.71
LMNA-216ENST00000496738 CTNND1O60716 968 aaKnown RBP19.46■□□□□ 0.71
LMNA-216ENST00000496738 GPATCH4Q5T3I0 446 aaKnown RBP19.46■□□□□ 0.71
LMNA-216ENST00000496738 TYW1BQ6NUM6 668 aa19.46■□□□□ 0.71
LMNA-216ENST00000496738 RBM27Q9P2N5 1060 aaKnown RBP19.46■□□□□ 0.71
LMNA-216ENST00000496738 SEC63Q9UGP8 760 aaKnown RBP19.46■□□□□ 0.71
LMNA-216ENST00000496738 USP17L10C9JJH3 530 aa19.46■□□□□ 0.71
LMNA-216ENST00000496738 TRAK2O60296 914 aa19.46■□□□□ 0.71
LMNA-216ENST00000496738 GADD45BO75293 160 aaPredicted RBP19.46■□□□□ 0.71
LMNA-216ENST00000496738 HOOK2Q96ED9 719 aa19.46■□□□□ 0.71
LMNA-216ENST00000496738 FEZ1Q99689 392 aa19.46■□□□□ 0.71
LMNA-216ENST00000496738 RIOX1Q9H6W3 641 aa19.46■□□□□ 0.71
LMNA-216ENST00000496738 ADAMTS3O15072 1205 aa19.45■□□□□ 0.7
LMNA-216ENST00000496738 NLRP5P59047 1200 aa19.45■□□□□ 0.7
LMNA-216ENST00000496738 IKQ13123 557 aaPredicted RBP19.45■□□□□ 0.7
LMNA-216ENST00000496738 USP28Q96RU2 1077 aa19.45■□□□□ 0.7
LMNA-216ENST00000496738 JMJD4Q9H9V9 463 aa19.45■□□□□ 0.7
LMNA-216ENST00000496738 DGKZQ13574 1117 aa19.45■□□□□ 0.7
LMNA-216ENST00000496738 SUPT20HL1Q3ZLR7 823 aa19.45■□□□□ 0.7
LMNA-216ENST00000496738 MYSM1Q5VVJ2 828 aa19.45■□□□□ 0.7
LMNA-216ENST00000496738 BRAPQ7Z569 592 aa19.45■□□□□ 0.7
LMNA-216ENST00000496738 GMCL1Q96IK5 515 aa19.45■□□□□ 0.7
LMNA-216ENST00000496738 GOPCQ9HD26 462 aa19.45■□□□□ 0.7
LMNA-216ENST00000496738 IQCA1LA6NCM1 817 aa19.44■□□□□ 0.7
LMNA-216ENST00000496738 TMEM232C9JQI7 657 aa19.44■□□□□ 0.7
LMNA-216ENST00000496738 BMP3P12645 472 aa19.44■□□□□ 0.7
LMNA-216ENST00000496738 SNAP25P60880 206 aa19.44■□□□□ 0.7
LMNA-216ENST00000496738 SPATA32Q96LK8 384 aa19.44■□□□□ 0.7
LMNA-216ENST00000496738 DOCK1Q14185 1865 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms