RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 INTUQ9ULD6 942 aa9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 L3MBTL1Q9Y468 752 aa9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 U3KPZ7 1027 aaPredicted RBP9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 PRDM15P57071 1507 aaPredicted RBP9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 SMIM23A6NLE4 172 aa9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 RNF8O76064 485 aa9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 MYBL1P10243 752 aa9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 C8orf58Q8NAV2 365 aa9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 GOLPH3LQ9H4A5 285 aa9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 STAP2Q9UGK3 403 aa9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 TSPYL4Q9UJ04 414 aa9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 EPN1Q9Y6I3 576 aaPredicted RBP9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 AATKQ6ZMQ8 1374 aa9.04□□□□□ -0.96
CRNKL1-205ENST00000496549 SPDYE3A6NKU9 549 aa9.04□□□□□ -0.96
CRNKL1-205ENST00000496549 CCT8L1PA6NM43 557 aa9.04□□□□□ -0.96
CRNKL1-205ENST00000496549 PFKFB1P16118 471 aa9.04□□□□□ -0.96
CRNKL1-205ENST00000496549 SCNN1BP51168 640 aa9.04□□□□□ -0.96
CRNKL1-205ENST00000496549 RAD23BP54727 409 aa9.04□□□□□ -0.96
CRNKL1-205ENST00000496549 CFAP221Q4G0U5 840 aa9.04□□□□□ -0.96
CRNKL1-205ENST00000496549 RRP36Q96EU6 259 aaKnown RBP9.04□□□□□ -0.96
CRNKL1-205ENST00000496549 MAF1Q9H063 256 aa9.04□□□□□ -0.96
CRNKL1-205ENST00000496549 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.04□□□□□ -0.96
CRNKL1-205ENST00000496549 SRRM3A6NNA2 597 aaPredicted RBP9.04□□□□□ -0.96
CRNKL1-205ENST00000496549 HSPA2P54652 639 aa9.04□□□□□ -0.96
CRNKL1-205ENST00000496549 XRCC4Q13426 336 aa9.04□□□□□ -0.96
CRNKL1-205ENST00000496549 AKNAD1Q5T1N1 836 aa9.04□□□□□ -0.96
CRNKL1-205ENST00000496549 CROCCP2Q86T23 111 aa9.04□□□□□ -0.96
CRNKL1-205ENST00000496549 LONP2Q86WA8 852 aa9.04□□□□□ -0.96
CRNKL1-205ENST00000496549 FAM81BQ96LP2 452 aa9.04□□□□□ -0.96
CRNKL1-205ENST00000496549 TUBA8Q9NY65 449 aaPredicted RBP9.04□□□□□ -0.96
CRNKL1-205ENST00000496549 ZRANB1Q9UGI0 708 aa9.04□□□□□ -0.96
CRNKL1-205ENST00000496549 ZNF711Q9Y462 761 aa9.04□□□□□ -0.96
CRNKL1-205ENST00000496549 ABCA9Q8IUA7 1624 aa9.04□□□□□ -0.96
CRNKL1-205ENST00000496549 A2MP01023 1474 aa9.04□□□□□ -0.96
CRNKL1-205ENST00000496549 F6X3S4 739 aa9.04□□□□□ -0.96
CRNKL1-205ENST00000496549 CMA1P23946 247 aa9.04□□□□□ -0.96
CRNKL1-205ENST00000496549 RBL2Q08999 1139 aa9.04□□□□□ -0.96
CRNKL1-205ENST00000496549 DIXDC1Q155Q3 683 aa9.04□□□□□ -0.96
CRNKL1-205ENST00000496549 ADCK5Q3MIX3 580 aa9.04□□□□□ -0.96
CRNKL1-205ENST00000496549 CCDC152Q4G0S7 254 aa9.04□□□□□ -0.96
CRNKL1-205ENST00000496549 PHLDB3Q6NSJ2 640 aa9.04□□□□□ -0.96
CRNKL1-205ENST00000496549 MTHFD1LQ6UB35 978 aa9.04□□□□□ -0.96
CRNKL1-205ENST00000496549 FMR1NBQ8N0W7 255 aaPredicted RBP9.04□□□□□ -0.96
CRNKL1-205ENST00000496549 NME8Q8N427 588 aa9.04□□□□□ -0.96
CRNKL1-205ENST00000496549 CCDC42Q96M95 316 aa9.04□□□□□ -0.96
CRNKL1-205ENST00000496549 OLFM3Q96PB7 478 aa9.04□□□□□ -0.96
CRNKL1-205ENST00000496549 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.04□□□□□ -0.96
CRNKL1-205ENST00000496549 TMOD4Q9NZQ9 345 aa9.04□□□□□ -0.96
CRNKL1-205ENST00000496549 TMCO1Q9UM00 188 aa9.04□□□□□ -0.96
CRNKL1-205ENST00000496549 FAF1Q9UNN5 650 aaPredicted RBP9.04□□□□□ -0.96
CRNKL1-205ENST00000496549 HYOU1Q9Y4L1 999 aa9.04□□□□□ -0.96
CRNKL1-205ENST00000496549 SLC27A2O14975 620 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 AKR1B10O60218 316 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 CSB-PGBD3P0DP91 1061 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 CASP14P31944 242 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 SERPINB4P48594 390 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 ANKRD20A2Q5SQ80 823 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 C1QTNF12Q5T7M4 302 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 ANKRD20A1Q5TYW2 823 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 ANKRD20A3Q5VUR7 823 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 ANO1Q5XXA6 986 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 BICDL1Q6ZP65 573 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 NANOGNBQ7Z5D8 188 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 TC2NQ8N9U0 490 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 DPF2Q92785 391 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 CHMP6Q96FZ7 201 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 RTEL1Q9NZ71 1219 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 SBNO1A3KN83 1393 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 SHANK2Q9UPX8 1470 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 TLDC2A0PJX2 215 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 EPB41P11171 864 aaKnown RBP9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 HDGFP51858 240 aaKnown RBP9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 COG7P83436 770 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 MPP3Q13368 585 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 MTF1Q14872 753 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 TMEM132AQ24JP5 1023 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 KIAA0753Q2KHM9 967 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 PHLDB2Q86SQ0 1253 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 AACSQ86V21 672 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 SMC1BQ8NDV3 1235 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 FBXO41Q8TF61 875 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 ARL8AQ96BM9 186 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 TRAPPC9Q96Q05 1148 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 UBAC1Q9BSL1 405 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 PHACTR1Q9C0D0 580 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 DMAP1Q9NPF5 467 aaPredicted RBP9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 PLCB1Q9NQ66 1216 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 UTP6Q9NYH9 597 aaKnown RBP9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 UBAP1Q9NZ09 502 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 ANKIB1Q9P2G1 1089 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 STOML1Q9UBI4 398 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 WDR37Q9Y2I8 494 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 MED14O60244 1454 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 LMNAP02545 664 aaKnown RBP9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 TEFQ10587 303 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 PNOCQ13519 176 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 PDIA5Q14554 519 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 HSP90AA5PQ58FG0 334 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 TTLL7Q6ZT98 887 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms