RNA–Protein interactions for RNA: ENST00000494746.1

CALCA-206, Transcript of calcitonin related polypeptide alpha, humanhuman

TSL 1 (best)

Gene CALCA, Length 1,837 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCA-206ENST00000494746 NOGQ13253 232 aa11.25□□□□□ -0.61
CALCA-206ENST00000494746 SLFN13Q68D06 897 aa11.25□□□□□ -0.61
CALCA-206ENST00000494746 APOA5Q6Q788 366 aa11.25□□□□□ -0.61
CALCA-206ENST00000494746 GADL1Q6ZQY3 521 aa11.25□□□□□ -0.61
CALCA-206ENST00000494746 NOL8Q76FK4 1167 aaKnown RBP11.25□□□□□ -0.61
CALCA-206ENST00000494746 MICU3Q86XE3 530 aa11.25□□□□□ -0.61
CALCA-206ENST00000494746 PROCA1Q8NCQ7 364 aaPredicted RBP11.25□□□□□ -0.61
CALCA-206ENST00000494746 LPAR1Q92633 364 aa11.25□□□□□ -0.61
CALCA-206ENST00000494746 NAP1L5Q96NT1 182 aaPredicted RBP11.25□□□□□ -0.61
CALCA-206ENST00000494746 TMOD4Q9NZQ9 345 aa11.25□□□□□ -0.61
CALCA-206ENST00000494746 KLF18A0A0U1RQI7 1052 aa11.24□□□□□ -0.61
CALCA-206ENST00000494746 TESPA1A2RU30 521 aaPredicted RBP11.24□□□□□ -0.61
CALCA-206ENST00000494746 CCDC69A6NI79 296 aa11.24□□□□□ -0.61
CALCA-206ENST00000494746 IGF2BP3O00425 579 aaKnown RBP eCLIP11.24□□□□□ -0.61
CALCA-206ENST00000494746 KIF23Q02241 960 aaPredicted RBP11.24□□□□□ -0.61
CALCA-206ENST00000494746 FAM83BQ5T0W9 1011 aa11.24□□□□□ -0.61
CALCA-206ENST00000494746 GPAT2Q6NUI2 795 aa11.24□□□□□ -0.61
CALCA-206ENST00000494746 KCTD1Q719H9 257 aa11.24□□□□□ -0.61
CALCA-206ENST00000494746 CATIPQ7Z7H3 387 aa11.24□□□□□ -0.61
CALCA-206ENST00000494746 CCDC144CPQ8IYA2 1237 aa11.24□□□□□ -0.61
CALCA-206ENST00000494746 TMTC2Q8N394 836 aa11.24□□□□□ -0.61
CALCA-206ENST00000494746 GMCL1Q96IK5 515 aa11.24□□□□□ -0.61
CALCA-206ENST00000494746 RPAP3Q9H6T3 665 aaPredicted RBP11.24□□□□□ -0.61
CALCA-206ENST00000494746 TPCN1Q9ULQ1 816 aa11.24□□□□□ -0.61
CALCA-206ENST00000494746 SLC12A7Q9Y666 1083 aa11.24□□□□□ -0.61
CALCA-206ENST00000494746 MANSC4A6NHS7 340 aaPredicted RBP11.23□□□□□ -0.61
CALCA-206ENST00000494746 BTBD19C9JJ37 291 aa11.23□□□□□ -0.61
CALCA-206ENST00000494746 WDR46O15213 610 aaKnown RBP11.23□□□□□ -0.61
CALCA-206ENST00000494746 GOLGA8HP0CJ92 632 aa11.23□□□□□ -0.61
CALCA-206ENST00000494746 SLC1A4P43007 532 aa11.23□□□□□ -0.61
CALCA-206ENST00000494746 EVCP57679 992 aa11.23□□□□□ -0.61
CALCA-206ENST00000494746 FASTKD5Q7L8L6 764 aaKnown RBP11.23□□□□□ -0.61
CALCA-206ENST00000494746 NUP133Q8WUM0 1156 aa11.23□□□□□ -0.61
CALCA-206ENST00000494746 ALDH8A1Q9H2A2 487 aaPredicted RBP11.23□□□□□ -0.61
CALCA-206ENST00000494746 AGTPBP1Q9UPW5 1226 aa11.23□□□□□ -0.61
CALCA-206ENST00000494746 HPS5Q9UPZ3 1129 aa11.23□□□□□ -0.61
CALCA-206ENST00000494746 FRMPD2Q68DX3 1309 aaPredicted RBP11.23□□□□□ -0.61
CALCA-206ENST00000494746 COL11A1P12107 1806 aaPredicted RBP11.23□□□□□ -0.61
CALCA-206ENST00000494746 HTTP42858 3142 aa11.23□□□□□ -0.61
CALCA-206ENST00000494746 GOLGA8BA8MQT2 603 aa11.23□□□□□ -0.61
CALCA-206ENST00000494746 DDAH1O94760 285 aa11.23□□□□□ -0.61
CALCA-206ENST00000494746 LARGE1O95461 756 aa11.23□□□□□ -0.61
CALCA-206ENST00000494746 BMP3P12645 472 aa11.23□□□□□ -0.61
CALCA-206ENST00000494746 ZNF543Q08ER8 600 aa11.23□□□□□ -0.61
CALCA-206ENST00000494746 CCDC96Q2M329 555 aa11.23□□□□□ -0.61
CALCA-206ENST00000494746 DCAF4Q8WV16 495 aa11.23□□□□□ -0.61
CALCA-206ENST00000494746 TANGO6Q9C0B7 1094 aa11.23□□□□□ -0.61
CALCA-206ENST00000494746 FBXO28Q9NVF7 368 aa11.23□□□□□ -0.61
CALCA-206ENST00000494746 MAD2L2Q9UI95 211 aa11.23□□□□□ -0.61
CALCA-206ENST00000494746 NAP1L2Q9ULW6 460 aaPredicted RBP11.23□□□□□ -0.61
CALCA-206ENST00000494746 A0A0G2JMZ2 1700 aa11.22□□□□□ -0.61
CALCA-206ENST00000494746 ZBTB43O43298 467 aa11.22□□□□□ -0.61
CALCA-206ENST00000494746 ST18O60284 1047 aa11.22□□□□□ -0.61
CALCA-206ENST00000494746 CLCN1P35523 988 aa11.22□□□□□ -0.61
CALCA-206ENST00000494746 SREBF2Q12772 1141 aa11.22□□□□□ -0.61
CALCA-206ENST00000494746 GRM4Q14833 912 aa11.22□□□□□ -0.61
CALCA-206ENST00000494746 ANKRD1Q15327 319 aa11.22□□□□□ -0.61
CALCA-206ENST00000494746 IFNL1Q8IU54 200 aa11.22□□□□□ -0.61
CALCA-206ENST00000494746 STAG2Q8N3U4 1231 aa11.22□□□□□ -0.61
CALCA-206ENST00000494746 CPVLQ9H3G5 476 aa11.22□□□□□ -0.61
CALCA-206ENST00000494746 ISY1Q9ULR0 285 aaKnown RBP11.22□□□□□ -0.61
CALCA-206ENST00000494746 BRCA2P51587 3418 aa11.22□□□□□ -0.61
CALCA-206ENST00000494746 MYH6P13533 1939 aa11.22□□□□□ -0.61
CALCA-206ENST00000494746 NID2Q14112 1375 aa11.21□□□□□ -0.61
CALCA-206ENST00000494746 PALM3A6NDB9 673 aaPredicted RBP11.21□□□□□ -0.61
CALCA-206ENST00000494746 PDHXO00330 501 aa11.21□□□□□ -0.61
CALCA-206ENST00000494746 FLOT1O75955 427 aa11.21□□□□□ -0.61
CALCA-206ENST00000494746 PARP1P09874 1014 aaKnown RBP11.21□□□□□ -0.61
CALCA-206ENST00000494746 CYP2C8P10632 490 aa11.21□□□□□ -0.61
CALCA-206ENST00000494746 PDIA3P30101 505 aaKnown RBP11.21□□□□□ -0.61
CALCA-206ENST00000494746 HOXA7P31268 230 aaPredicted RBP11.21□□□□□ -0.61
CALCA-206ENST00000494746 TM4SF4P48230 202 aa11.21□□□□□ -0.61
CALCA-206ENST00000494746 SLC4A3P48751 1232 aa11.21□□□□□ -0.61
CALCA-206ENST00000494746 STK3Q13188 491 aa11.21□□□□□ -0.61
CALCA-206ENST00000494746 TTBK2Q6IQ55 1244 aa11.21□□□□□ -0.61
CALCA-206ENST00000494746 CATSPERGQ6ZRH7 1159 aa11.21□□□□□ -0.61
CALCA-206ENST00000494746 ANKRD23Q86SG2 305 aa11.21□□□□□ -0.61
CALCA-206ENST00000494746 DNAJC5GQ8N7S2 189 aa11.21□□□□□ -0.61
CALCA-206ENST00000494746 ASCC2Q9H1I8 757 aaPredicted RBP11.21□□□□□ -0.61
CALCA-206ENST00000494746 GPCPD1Q9NPB8 672 aa11.21□□□□□ -0.61
CALCA-206ENST00000494746 SMCHD1A6NHR9 2005 aa11.21□□□□□ -0.62
CALCA-206ENST00000494746 USP17L15C9J2P7 530 aa11.21□□□□□ -0.62
CALCA-206ENST00000494746 USP17L13C9JLJ4 530 aa11.21□□□□□ -0.62
CALCA-206ENST00000494746 TMEM232C9JQI7 657 aa11.21□□□□□ -0.62
CALCA-206ENST00000494746 USP17L11C9JVI0 530 aa11.21□□□□□ -0.62
CALCA-206ENST00000494746 USP17L18D6R9N7 530 aa11.21□□□□□ -0.62
CALCA-206ENST00000494746 USP17L22D6RA61 530 aa11.21□□□□□ -0.62
CALCA-206ENST00000494746 USP17L17D6RBQ6 530 aa11.21□□□□□ -0.62
CALCA-206ENST00000494746 USP17L19D6RCP7 530 aa11.21□□□□□ -0.62
CALCA-206ENST00000494746 USP17L20D6RJB6 530 aa11.21□□□□□ -0.62
CALCA-206ENST00000494746 CALM1P0DP23 149 aa11.21□□□□□ -0.62
CALCA-206ENST00000494746 CALM2P0DP24 149 aa11.21□□□□□ -0.62
CALCA-206ENST00000494746 CALM3P0DP25 149 aa11.21□□□□□ -0.62
CALCA-206ENST00000494746 CDC27P30260 824 aa11.21□□□□□ -0.62
CALCA-206ENST00000494746 SLC16A2P36021 539 aa11.21□□□□□ -0.62
CALCA-206ENST00000494746 MAP2K2P36507 400 aa11.21□□□□□ -0.62
CALCA-206ENST00000494746 METAP2P50579 478 aaKnown RBP eCLIP11.21□□□□□ -0.62
CALCA-206ENST00000494746 STAT2P52630 851 aa11.21□□□□□ -0.62
CALCA-206ENST00000494746 INHBEP58166 350 aa11.21□□□□□ -0.62
CALCA-206ENST00000494746 CCT2P78371 535 aaKnown RBP11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms