RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, human

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-222	ENST00000493919	PPP4C	P60510	307 aa		13.26	□□□□□ -0.29
BRCA1-222	ENST00000493919	SLC5A9	Q2M3M2	681 aa		13.26	□□□□□ -0.29
BRCA1-222	ENST00000493919	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.26	□□□□□ -0.29
BRCA1-222	ENST00000493919	SLC4A8	Q2Y0W8	1093 aa		13.26	□□□□□ -0.29
BRCA1-222	ENST00000493919	SUPT20HL1	Q3ZLR7	823 aa		13.26	□□□□□ -0.29
BRCA1-222	ENST00000493919	MOB2	Q70IA6	237 aa		13.26	□□□□□ -0.29
BRCA1-222	ENST00000493919	ZFPM1	Q8IX07	1006 aa		13.26	□□□□□ -0.29
BRCA1-222	ENST00000493919	TXLNB	Q8N3L3	684 aa		13.26	□□□□□ -0.29
BRCA1-222	ENST00000493919	LCORL	Q8N3X6	602 aa		13.26	□□□□□ -0.29
BRCA1-222	ENST00000493919	C2orf69	Q8N8R5	385 aa		13.26	□□□□□ -0.29
BRCA1-222	ENST00000493919	FAM151A	Q8WW52	585 aa		13.26	□□□□□ -0.29
BRCA1-222	ENST00000493919	AIDA	Q96BJ3	306 aa		13.26	□□□□□ -0.29
BRCA1-222	ENST00000493919	TEPSIN	Q96N21	525 aa		13.26	□□□□□ -0.29
BRCA1-222	ENST00000493919	RIOK1	Q9BRS2	568 aa	Known RBP	13.26	□□□□□ -0.29
BRCA1-222	ENST00000493919	ARMT1	Q9H993	441 aa		13.26	□□□□□ -0.29
BRCA1-222	ENST00000493919	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.26	□□□□□ -0.29
BRCA1-222	ENST00000493919	NAV1	Q8NEY1	1877 aa		13.26	□□□□□ -0.29
BRCA1-222	ENST00000493919	FLT1	P17948	1338 aa		13.26	□□□□□ -0.29
BRCA1-222	ENST00000493919	RNF113A	O15541	343 aa	Known RBP	13.25	□□□□□ -0.29
BRCA1-222	ENST00000493919	CBFA2T2	O43439	604 aa		13.25	□□□□□ -0.29
BRCA1-222	ENST00000493919	MYBL2	P10244	700 aa		13.25	□□□□□ -0.29
BRCA1-222	ENST00000493919	USP5	P45974	858 aa		13.25	□□□□□ -0.29
BRCA1-222	ENST00000493919	HUNK	P57058	714 aa		13.25	□□□□□ -0.29
BRCA1-222	ENST00000493919	CCDC15	Q0P6D6	951 aa		13.25	□□□□□ -0.29
BRCA1-222	ENST00000493919	GRM1	Q13255	1194 aa		13.25	□□□□□ -0.29
BRCA1-222	ENST00000493919	UBE3C	Q15386	1083 aa		13.25	□□□□□ -0.29
BRCA1-222	ENST00000493919	TAX1BP1	Q86VP1	789 aa		13.25	□□□□□ -0.29
BRCA1-222	ENST00000493919	ANKRD13B	Q86YJ7	626 aa		13.25	□□□□□ -0.29
BRCA1-222	ENST00000493919	DRAXIN	Q8NBI3	349 aa	Predicted RBP	13.25	□□□□□ -0.29
BRCA1-222	ENST00000493919	RMDN2	Q96LZ7	410 aa		13.25	□□□□□ -0.29
BRCA1-222	ENST00000493919	CSRNP1	Q96S65	589 aa		13.25	□□□□□ -0.29
BRCA1-222	ENST00000493919	ENTPD3	O75355	529 aa		13.25	□□□□□ -0.29
BRCA1-222	ENST00000493919	ZFY	P08048	801 aa	Predicted RBP	13.25	□□□□□ -0.29
BRCA1-222	ENST00000493919	TTC22	Q5TAA0	569 aa		13.25	□□□□□ -0.29
BRCA1-222	ENST00000493919	STAG1	Q8WVM7	1258 aa		13.25	□□□□□ -0.29
BRCA1-222	ENST00000493919	APPBP2	Q92624	585 aa		13.25	□□□□□ -0.29
BRCA1-222	ENST00000493919	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.25	□□□□□ -0.29
BRCA1-222	ENST00000493919	PUS7L	Q9H0K6	701 aa	Known RBP	13.25	□□□□□ -0.29
BRCA1-222	ENST00000493919	CCDC39	Q9UFE4	941 aa		13.25	□□□□□ -0.29
BRCA1-222	ENST00000493919	MKRN1	Q9UHC7	482 aa	Known RBP	13.25	□□□□□ -0.29
BRCA1-222	ENST00000493919	ANGEL1	Q9UNK9	670 aa	Known RBP	13.25	□□□□□ -0.29
BRCA1-222	ENST00000493919	UNCX	A6NJT0	531 aa		13.24	□□□□□ -0.29
BRCA1-222	ENST00000493919	PPP1R12B	O60237	982 aa	Predicted RBP	13.24	□□□□□ -0.29
BRCA1-222	ENST00000493919	TPM1	P09493	284 aa		13.24	□□□□□ -0.29
BRCA1-222	ENST00000493919	GSPT1	P15170	499 aa	Known RBP	13.24	□□□□□ -0.29
BRCA1-222	ENST00000493919	NASP	P49321	788 aa	Predicted RBP	13.24	□□□□□ -0.29
BRCA1-222	ENST00000493919	SDR42E1	Q8WUS8	393 aa		13.24	□□□□□ -0.29
BRCA1-222	ENST00000493919	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.24	□□□□□ -0.29
BRCA1-222	ENST00000493919	RETREG1	Q9H6L5	497 aa		13.24	□□□□□ -0.29
BRCA1-222	ENST00000493919	SAP30BP	Q9UHR5	308 aa	Known RBP	13.24	□□□□□ -0.29
BRCA1-222	ENST00000493919	PUF60	Q9UHX1	559 aa	Known RBP	13.24	□□□□□ -0.29
BRCA1-222	ENST00000493919	STK24	Q9Y6E0	443 aa		13.24	□□□□□ -0.29
BRCA1-222	ENST00000493919	TLL2	Q9Y6L7	1015 aa		13.24	□□□□□ -0.29
BRCA1-222	ENST00000493919	OTOF	Q9HC10	1997 aa		13.23	□□□□□ -0.29
BRCA1-222	ENST00000493919	ERICH4	A6NGS2	130 aa		13.23	□□□□□ -0.29
BRCA1-222	ENST00000493919	DDTL	A6NHG4	134 aa	Predicted RBP	13.23	□□□□□ -0.29
BRCA1-222	ENST00000493919	TMED1	Q13445	227 aa		13.23	□□□□□ -0.29
BRCA1-222	ENST00000493919	MIGA2	Q7L4E1	593 aa		13.23	□□□□□ -0.29
BRCA1-222	ENST00000493919	ARMC9	Q7Z3E5	817 aa		13.23	□□□□□ -0.29
BRCA1-222	ENST00000493919	SAPCD2	Q86UD0	394 aa		13.23	□□□□□ -0.29
BRCA1-222	ENST00000493919	OSBP2	Q969R2	916 aa		13.23	□□□□□ -0.29
BRCA1-222	ENST00000493919	FAXDC2	Q96IV6	333 aa		13.23	□□□□□ -0.29
BRCA1-222	ENST00000493919	PDLIM2	Q96JY6	352 aa		13.23	□□□□□ -0.29
BRCA1-222	ENST00000493919	SEC62	Q99442	399 aa	Known RBP	13.23	□□□□□ -0.29
BRCA1-222	ENST00000493919	CTNNA3	Q9UI47	895 aa		13.23	□□□□□ -0.29
BRCA1-222	ENST00000493919	UBE2Q2L	H0YL09	131 aa		13.23	□□□□□ -0.29
BRCA1-222	ENST00000493919		M0R2C6	588 aa		13.23	□□□□□ -0.29
BRCA1-222	ENST00000493919	TIMM44	O43615	452 aa		13.23	□□□□□ -0.29
BRCA1-222	ENST00000493919	PDIA5	Q14554	519 aa		13.23	□□□□□ -0.29
BRCA1-222	ENST00000493919	SART3	Q15020	963 aa	Known RBP	13.23	□□□□□ -0.29
BRCA1-222	ENST00000493919	RBBP5	Q15291	538 aa	Known RBP	13.23	□□□□□ -0.29
BRCA1-222	ENST00000493919	SH3BP5L	Q7L8J4	393 aa		13.23	□□□□□ -0.29
BRCA1-222	ENST00000493919	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.23	□□□□□ -0.29
BRCA1-222	ENST00000493919	DDX60L	Q5H9U9	1706 aa	Known RBP	13.22	□□□□□ -0.29
BRCA1-222	ENST00000493919	MYH1	P12882	1939 aa		13.22	□□□□□ -0.29
BRCA1-222	ENST00000493919	GPAA1	O43292	621 aa		13.22	□□□□□ -0.29
BRCA1-222	ENST00000493919	BAG4	O95429	457 aa	Known RBP	13.22	□□□□□ -0.29
BRCA1-222	ENST00000493919	CCDC175	P0C221	793 aa		13.22	□□□□□ -0.29
BRCA1-222	ENST00000493919	MAGEA9	P43362	315 aa		13.22	□□□□□ -0.29
BRCA1-222	ENST00000493919	RPS6KA3	P51812	740 aa		13.22	□□□□□ -0.29
BRCA1-222	ENST00000493919	FKBP1B	P68106	108 aa		13.22	□□□□□ -0.29
BRCA1-222	ENST00000493919	KCNA1	Q09470	495 aa		13.22	□□□□□ -0.29
BRCA1-222	ENST00000493919	NFXL1	Q6ZNB6	911 aa		13.22	□□□□□ -0.29
BRCA1-222	ENST00000493919	HOOK2	Q96ED9	719 aa		13.22	□□□□□ -0.29
BRCA1-222	ENST00000493919	TRERF1	Q96PN7	1200 aa		13.22	□□□□□ -0.29
BRCA1-222	ENST00000493919	DIAPH3	Q9NSV4	1193 aa		13.22	□□□□□ -0.29
BRCA1-222	ENST00000493919	COMMD10	Q9Y6G5	202 aa		13.22	□□□□□ -0.29
BRCA1-222	ENST00000493919	ATRNL1	Q5VV63	1379 aa		13.22	□□□□□ -0.29
BRCA1-222	ENST00000493919	COL2A1	P02458	1487 aa	Predicted RBP	13.21	□□□□□ -0.29
BRCA1-222	ENST00000493919	FAM196B	A6NMK8	535 aa		13.21	□□□□□ -0.29
BRCA1-222	ENST00000493919	PRKAB2	O43741	272 aa		13.21	□□□□□ -0.29
BRCA1-222	ENST00000493919	IREB2	P48200	963 aa	Known RBP	13.21	□□□□□ -0.29
BRCA1-222	ENST00000493919	GYS2	P54840	703 aa		13.21	□□□□□ -0.29
BRCA1-222	ENST00000493919	PSMD2	Q13200	908 aa		13.21	□□□□□ -0.29
BRCA1-222	ENST00000493919	DCAF15	Q66K64	600 aa		13.21	□□□□□ -0.29
BRCA1-222	ENST00000493919	LEKR1	Q6ZMV7	388 aa		13.21	□□□□□ -0.29
BRCA1-222	ENST00000493919	MMS22L	Q6ZRQ5	1243 aa		13.21	□□□□□ -0.29
BRCA1-222	ENST00000493919	CRACR2A	Q9BSW2	395 aa		13.21	□□□□□ -0.29
BRCA1-222	ENST00000493919	PALD1	Q9ULE6	856 aa		13.21	□□□□□ -0.29
BRCA1-222	ENST00000493919	SLC4A4	Q9Y6R1	1079 aa		13.21	□□□□□ -0.29

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