RNA–Protein interactions for RNA: ENST00000490299.5

RPS6KC1-204, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best)

Gene RPS6KC1, Length 5,154 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-204ENST00000490299 EIF3BP55884 814 aaKnown RBP4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 LMNB2Q03252 620 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 KCNJ12Q14500 433 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 KRT71Q3SY84 523 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 ANKRD20A3Q5VUR7 823 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 SPATA1Q5VX52 437 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 CDC37L1Q7L3B6 337 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 PEX26Q7Z412 305 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 CNPY4Q8N129 248 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 XAGE3Q8WTP9 111 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 CCT6BQ92526 530 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 TBC1D31Q96DN5 1066 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 LRRC2Q9BYS8 371 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 VPS16Q9H269 839 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 SPTLC3Q9NUV7 552 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 DIS3Q9Y2L1 958 aaKnown RBP4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 KDRP35968 1356 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 CEP104O60308 925 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 PLCB3Q01970 1234 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 KLHL30Q0D2K2 578 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 DYNC1I2Q13409 638 aaKnown RBP4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 MORC3Q14149 939 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 NBPF9Q3BBW0 867 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 GLE1Q53GS7 698 aaKnown RBP4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 SARM1Q6SZW1 724 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 PNMA8AQ86V59 439 aaPredicted RBP4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 CDAN1Q8IWY9 1227 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 GPT2Q8TD30 523 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 PPP4R1Q8TF05 950 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 WHAMMQ8TF30 809 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 BPIFA3Q9BQP9 254 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 DRC3Q9H069 523 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 POLKQ9UBT6 870 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 BAIAP2L1Q9UHR4 511 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 LCMT1Q9UIC8 334 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 AMOTL2Q9Y2J4 779 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 YEATS2Q9ULM3 1422 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 POLR2DO15514 142 aaKnown RBP4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 THAP12O43422 761 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 GTPBP6O43824 516 aaPredicted RBP4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 KIF11P52732 1056 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 DMWDQ09019 674 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 NCBP1Q09161 790 aaKnown RBP4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 LONRF2Q1L5Z9 754 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 MIER3Q7Z3K6 550 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 FNBP4Q8N3X1 1017 aaPredicted RBP4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 GBP7Q8N8V2 638 aaPredicted RBP4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 DTNBP1Q96EV8 351 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 DDX27Q96GQ7 796 aaKnown RBP4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 FAM81BQ96LP2 452 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 IWS1Q96ST2 819 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 EIF2AQ9BY44 585 aaKnown RBP4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 NBPF3Q9H094 633 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 OSBPL3Q9H4L5 887 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 QTRT2Q9H974 415 aaKnown RBP4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 ANGPTL2Q9UKU9 493 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 PASKQ96RG2 1323 aa4.09□□□□□ -1.75
RPS6KC1-204ENST00000490299 CRCPO75575 148 aa4.09□□□□□ -1.76
RPS6KC1-204ENST00000490299 PFKFB1P16118 471 aa4.09□□□□□ -1.76
RPS6KC1-204ENST00000490299 EEF1GP26641 437 aaKnown RBP4.09□□□□□ -1.76
RPS6KC1-204ENST00000490299 IL9RQ01113 521 aa4.09□□□□□ -1.76
RPS6KC1-204ENST00000490299 ARID5AQ03989 594 aa4.09□□□□□ -1.76
RPS6KC1-204ENST00000490299 DEUP1Q05D60 604 aa4.09□□□□□ -1.76
RPS6KC1-204ENST00000490299 DRP2Q13474 957 aa4.09□□□□□ -1.76
RPS6KC1-204ENST00000490299 NONOQ15233 471 aaKnown RBP eCLIP4.09□□□□□ -1.76
RPS6KC1-204ENST00000490299 BRDTQ58F21 947 aaPredicted RBP4.09□□□□□ -1.76
RPS6KC1-204ENST00000490299 HSP90AA4PQ58FG1 418 aa4.09□□□□□ -1.76
RPS6KC1-204ENST00000490299 DCAF17Q5H9S7 520 aaPredicted RBP4.09□□□□□ -1.76
RPS6KC1-204ENST00000490299 LMBR1LQ6UX01 489 aa4.09□□□□□ -1.76
RPS6KC1-204ENST00000490299 PPP1R21Q6ZMI0 780 aa4.09□□□□□ -1.76
RPS6KC1-204ENST00000490299 SDCCAG8Q86SQ7 713 aaPredicted RBP4.09□□□□□ -1.76
RPS6KC1-204ENST00000490299 KBTBD3Q8NAB2 608 aa4.09□□□□□ -1.76
RPS6KC1-204ENST00000490299 PLBD2Q8NHP8 589 aa4.09□□□□□ -1.76
RPS6KC1-204ENST00000490299 BCAS4Q8TDM0 211 aa4.09□□□□□ -1.76
RPS6KC1-204ENST00000490299 TRIM11Q96F44 468 aa4.09□□□□□ -1.76
RPS6KC1-204ENST00000490299 CCDC85AQ96PX6 553 aaPredicted RBP4.09□□□□□ -1.76
RPS6KC1-204ENST00000490299 PANX2Q96RD6 677 aa4.09□□□□□ -1.76
RPS6KC1-204ENST00000490299 BICC1Q9H694 974 aaKnown RBP4.09□□□□□ -1.76
RPS6KC1-204ENST00000490299 RTEL1Q9NZ71 1219 aa4.09□□□□□ -1.76
RPS6KC1-204ENST00000490299 ASIC3Q9UHC3 531 aa4.09□□□□□ -1.76
RPS6KC1-204ENST00000490299 ZNF215Q9UL58 517 aaPredicted RBP4.09□□□□□ -1.76
RPS6KC1-204ENST00000490299 RAB23Q9ULC3 237 aa4.09□□□□□ -1.76
RPS6KC1-204ENST00000490299 TRIM35Q9UPQ4 493 aa4.09□□□□□ -1.76
RPS6KC1-204ENST00000490299 MAST3O60307 1309 aa4.09□□□□□ -1.76
RPS6KC1-204ENST00000490299 PCDH11XQ9BZA7 1347 aa4.09□□□□□ -1.76
RPS6KC1-204ENST00000490299 PCDH11YQ9BZA8 1340 aa4.09□□□□□ -1.76
RPS6KC1-204ENST00000490299 ADCY9O60503 1353 aa4.09□□□□□ -1.76
RPS6KC1-204ENST00000490299 MED23Q9ULK4 1368 aa4.09□□□□□ -1.76
RPS6KC1-204ENST00000490299 ITSN1Q15811 1721 aa4.09□□□□□ -1.76
RPS6KC1-204ENST00000490299 SEMA3EO15041 775 aa4.08□□□□□ -1.76
RPS6KC1-204ENST00000490299 ATP5HO75947 161 aa4.08□□□□□ -1.76
RPS6KC1-204ENST00000490299 DDAH1O94760 285 aa4.08□□□□□ -1.76
RPS6KC1-204ENST00000490299 ATP5JP18859 108 aa4.08□□□□□ -1.76
RPS6KC1-204ENST00000490299 LONP1P36776 959 aaKnown RBP4.08□□□□□ -1.76
RPS6KC1-204ENST00000490299 ZC3H6P61129 1189 aaKnown RBP4.08□□□□□ -1.76
RPS6KC1-204ENST00000490299 MRPS9P82933 396 aaKnown RBP4.08□□□□□ -1.76
RPS6KC1-204ENST00000490299 PUM3Q15397 648 aaKnown RBP4.08□□□□□ -1.76
RPS6KC1-204ENST00000490299 MTHFSDQ2M296 383 aaKnown RBP4.08□□□□□ -1.76
RPS6KC1-204ENST00000490299 MYSM1Q5VVJ2 828 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms