RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 USP17L18D6R9N7 530 aa14.6□□□□□ -0.07
HDAC1-210ENST00000490081 USP17L22D6RA61 530 aa14.6□□□□□ -0.07
HDAC1-210ENST00000490081 USP17L17D6RBQ6 530 aa14.6□□□□□ -0.07
HDAC1-210ENST00000490081 USP17L19D6RCP7 530 aa14.6□□□□□ -0.07
HDAC1-210ENST00000490081 USP17L20D6RJB6 530 aa14.6□□□□□ -0.07
HDAC1-210ENST00000490081 FDX1P10109 184 aa14.6□□□□□ -0.07
HDAC1-210ENST00000490081 PDHBP11177 359 aa14.6□□□□□ -0.07
HDAC1-210ENST00000490081 VCAM1P19320 739 aa14.6□□□□□ -0.07
HDAC1-210ENST00000490081 SMARCA1P28370 1054 aa14.6□□□□□ -0.07
HDAC1-210ENST00000490081 ATP2B2Q01814 1243 aa14.6□□□□□ -0.07
HDAC1-210ENST00000490081 USP17L24Q0WX57 530 aa14.6□□□□□ -0.07
HDAC1-210ENST00000490081 GPATCH4Q5T3I0 446 aaKnown RBP14.6□□□□□ -0.07
HDAC1-210ENST00000490081 SLFN13Q68D06 897 aa14.6□□□□□ -0.07
HDAC1-210ENST00000490081 BTNL9Q6UXG8 535 aa14.6□□□□□ -0.07
HDAC1-210ENST00000490081 LBX2Q6XYB7 198 aa14.6□□□□□ -0.07
HDAC1-210ENST00000490081 Q6ZUG5 572 aa14.6□□□□□ -0.07
HDAC1-210ENST00000490081 CATIPQ7Z7H3 387 aa14.6□□□□□ -0.07
HDAC1-210ENST00000490081 IFNL1Q8IU54 200 aa14.6□□□□□ -0.07
HDAC1-210ENST00000490081 ZNF274Q96GC6 653 aaPredicted RBP14.6□□□□□ -0.07
HDAC1-210ENST00000490081 BEGAINQ9BUH8 593 aa14.6□□□□□ -0.07
HDAC1-210ENST00000490081 HOXC10Q9NYD6 342 aa14.6□□□□□ -0.07
HDAC1-210ENST00000490081 TSKSQ9UJT2 592 aa14.6□□□□□ -0.07
HDAC1-210ENST00000490081 ADAMTS5Q9UNA0 930 aa14.6□□□□□ -0.07
HDAC1-210ENST00000490081 CCDC69A6NI79 296 aa14.59□□□□□ -0.07
HDAC1-210ENST00000490081 BTBD19C9JJ37 291 aa14.59□□□□□ -0.07
HDAC1-210ENST00000490081 CA12O43570 354 aa14.59□□□□□ -0.07
HDAC1-210ENST00000490081 BMP3P12645 472 aa14.59□□□□□ -0.07
HDAC1-210ENST00000490081 CPA1P15085 419 aa14.59□□□□□ -0.07
HDAC1-210ENST00000490081 NEK4P51957 841 aa14.59□□□□□ -0.07
HDAC1-210ENST00000490081 TOB2Q14106 344 aaPredicted RBP14.59□□□□□ -0.07
HDAC1-210ENST00000490081 ASPRV1Q53RT3 343 aa14.59□□□□□ -0.07
HDAC1-210ENST00000490081 APOA5Q6Q788 366 aa14.59□□□□□ -0.07
HDAC1-210ENST00000490081 ZNF654Q8IZM8 581 aa14.59□□□□□ -0.07
HDAC1-210ENST00000490081 LRRC47Q8N1G4 583 aaKnown RBP14.59□□□□□ -0.07
HDAC1-210ENST00000490081 CHURC1Q8WUH1 139 aa14.59□□□□□ -0.07
HDAC1-210ENST00000490081 ABHD8Q96I13 439 aa14.59□□□□□ -0.07
HDAC1-210ENST00000490081 UPF3BQ9BZI7 483 aaKnown RBP14.59□□□□□ -0.07
HDAC1-210ENST00000490081 SENP2Q9HC62 589 aa14.59□□□□□ -0.07
HDAC1-210ENST00000490081 FEM1BQ9UK73 627 aa14.59□□□□□ -0.07
HDAC1-210ENST00000490081 PNMA3Q9UL41 463 aa14.59□□□□□ -0.07
HDAC1-210ENST00000490081 SLC12A7Q9Y666 1083 aa14.59□□□□□ -0.07
HDAC1-210ENST00000490081 NID2Q14112 1375 aa14.59□□□□□ -0.07
HDAC1-210ENST00000490081 PALM3A6NDB9 673 aaPredicted RBP14.58□□□□□ -0.08
HDAC1-210ENST00000490081 IGF2BP3O00425 579 aaKnown RBP eCLIP14.58□□□□□ -0.08
HDAC1-210ENST00000490081 OSBPP22059 807 aa14.58□□□□□ -0.08
HDAC1-210ENST00000490081 SLC1A4P43007 532 aa14.58□□□□□ -0.08
HDAC1-210ENST00000490081 FGD1P98174 961 aa14.58□□□□□ -0.08
HDAC1-210ENST00000490081 ZNF543Q08ER8 600 aa14.58□□□□□ -0.08
HDAC1-210ENST00000490081 COG2Q14746 738 aa14.58□□□□□ -0.08
HDAC1-210ENST00000490081 SYNE3Q6ZMZ3 975 aa14.58□□□□□ -0.08
HDAC1-210ENST00000490081 GADL1Q6ZQY3 521 aa14.58□□□□□ -0.08
HDAC1-210ENST00000490081 FAM160B2Q86V87 743 aa14.58□□□□□ -0.08
HDAC1-210ENST00000490081 GTF3C2Q8WUA4 911 aaPredicted RBP14.58□□□□□ -0.08
HDAC1-210ENST00000490081 BRF1Q92994 677 aa14.58□□□□□ -0.08
HDAC1-210ENST00000490081 GPHNQ9NQX3 736 aaPredicted RBP14.58□□□□□ -0.08
HDAC1-210ENST00000490081 PDHXO00330 501 aa14.57□□□□□ -0.08
HDAC1-210ENST00000490081 KIF5BP33176 963 aa14.57□□□□□ -0.08
HDAC1-210ENST00000490081 MKRN3Q13064 507 aaKnown RBP14.57□□□□□ -0.08
HDAC1-210ENST00000490081 GRM4Q14833 912 aa14.57□□□□□ -0.08
HDAC1-210ENST00000490081 ZYXQ15942 572 aaKnown RBP14.57□□□□□ -0.08
HDAC1-210ENST00000490081 NOM1Q5C9Z4 860 aaKnown RBP14.57□□□□□ -0.08
HDAC1-210ENST00000490081 TREML2Q5T2D2 321 aa14.57□□□□□ -0.08
HDAC1-210ENST00000490081 NFXL1Q6ZNB6 911 aa14.57□□□□□ -0.08
HDAC1-210ENST00000490081 FAM43AQ8N2R8 423 aa14.57□□□□□ -0.08
HDAC1-210ENST00000490081 PRPF38AQ8NAV1 312 aaKnown RBP14.57□□□□□ -0.08
HDAC1-210ENST00000490081 FANCBQ8NB91 859 aa14.57□□□□□ -0.08
HDAC1-210ENST00000490081 TCEANC2Q96MN5 208 aa14.57□□□□□ -0.08
HDAC1-210ENST00000490081 LZTS2Q9BRK4 669 aa14.57□□□□□ -0.08
HDAC1-210ENST00000490081 LRRC2Q9BYS8 371 aa14.57□□□□□ -0.08
HDAC1-210ENST00000490081 RPAP3Q9H6T3 665 aaPredicted RBP14.57□□□□□ -0.08
HDAC1-210ENST00000490081 SAGE1Q9NXZ1 904 aa14.57□□□□□ -0.08
HDAC1-210ENST00000490081 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.57□□□□□ -0.08
HDAC1-210ENST00000490081 BRPF3Q9ULD4 1205 aa14.57□□□□□ -0.08
HDAC1-210ENST00000490081 CASP8AP2Q9UKL3 1982 aa14.56□□□□□ -0.08
HDAC1-210ENST00000490081 PARP1P09874 1014 aaKnown RBP14.56□□□□□ -0.08
HDAC1-210ENST00000490081 DSG3P32926 999 aa14.56□□□□□ -0.08
HDAC1-210ENST00000490081 GCLCP48506 637 aaPredicted RBP14.56□□□□□ -0.08
HDAC1-210ENST00000490081 MCM2P49736 904 aa14.56□□□□□ -0.08
HDAC1-210ENST00000490081 GNAQP50148 359 aa14.56□□□□□ -0.08
HDAC1-210ENST00000490081 FAM83BQ5T0W9 1011 aa14.56□□□□□ -0.08
HDAC1-210ENST00000490081 SPICE1Q8N0Z3 855 aa14.56□□□□□ -0.08
HDAC1-210ENST00000490081 MB21D1Q8N884 522 aa14.56□□□□□ -0.08
HDAC1-210ENST00000490081 ASCC2Q9H1I8 757 aaPredicted RBP14.56□□□□□ -0.08
HDAC1-210ENST00000490081 MAD2L2Q9UI95 211 aa14.56□□□□□ -0.08
HDAC1-210ENST00000490081 KLF18A0A0U1RQI7 1052 aa14.55□□□□□ -0.08
HDAC1-210ENST00000490081 CCDC196A0A1B0GTZ2 297 aa14.55□□□□□ -0.08
HDAC1-210ENST00000490081 ATP2A1O14983 1001 aa14.55□□□□□ -0.08
HDAC1-210ENST00000490081 ZBTB43O43298 467 aa14.55□□□□□ -0.08
HDAC1-210ENST00000490081 ST18O60284 1047 aa14.55□□□□□ -0.08
HDAC1-210ENST00000490081 PDIA3P30101 505 aaKnown RBP14.55□□□□□ -0.08
HDAC1-210ENST00000490081 STAT2P52630 851 aa14.55□□□□□ -0.08
HDAC1-210ENST00000490081 AK2P54819 239 aa14.55□□□□□ -0.08
HDAC1-210ENST00000490081 DGKZQ13574 1117 aa14.55□□□□□ -0.08
HDAC1-210ENST00000490081 CTCFLQ8NI51 663 aaPredicted RBP14.55□□□□□ -0.08
HDAC1-210ENST00000490081 CHMP4CQ96CF2 233 aa14.55□□□□□ -0.08
HDAC1-210ENST00000490081 PARK7Q99497 189 aaKnown RBP14.55□□□□□ -0.08
HDAC1-210ENST00000490081 RBM28Q9NW13 759 aaKnown RBP14.55□□□□□ -0.08
HDAC1-210ENST00000490081 PPP1R9AQ9ULJ8 1098 aa14.55□□□□□ -0.08
HDAC1-210ENST00000490081 HPS5Q9UPZ3 1129 aa14.55□□□□□ -0.08
HDAC1-210ENST00000490081 TMEM232C9JQI7 657 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms