RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	DSCC1	Q9BVC3	393 aa		13.12	□□□□□ -0.31
GGA1-222	ENST00000489772	PORCN	Q9H237	461 aa		13.12	□□□□□ -0.31
GGA1-222	ENST00000489772	RNF41	Q9H4P4	317 aa	Predicted RBP	13.12	□□□□□ -0.31
GGA1-222	ENST00000489772	BTBD7	Q9P203	1132 aa		13.12	□□□□□ -0.31
GGA1-222	ENST00000489772	CTNNA3	Q9UI47	895 aa		13.12	□□□□□ -0.31
GGA1-222	ENST00000489772	GJD2	Q9UKL4	321 aa		13.12	□□□□□ -0.31
GGA1-222	ENST00000489772	STX8	Q9UNK0	236 aa		13.12	□□□□□ -0.31
GGA1-222	ENST00000489772	CENPF	P49454	3210 aa		13.12	□□□□□ -0.31
GGA1-222	ENST00000489772	CHML	P26374	656 aa		13.11	□□□□□ -0.31
GGA1-222	ENST00000489772	MLLT1	Q03111	559 aa	Predicted RBP	13.11	□□□□□ -0.31
GGA1-222	ENST00000489772	AKNAD1	Q5T1N1	836 aa		13.11	□□□□□ -0.31
GGA1-222	ENST00000489772	WDR78	Q5VTH9	848 aa		13.11	□□□□□ -0.31
GGA1-222	ENST00000489772	GPR142	Q7Z601	462 aa		13.11	□□□□□ -0.31
GGA1-222	ENST00000489772	PLEKHH3	Q7Z736	793 aa		13.11	□□□□□ -0.31
GGA1-222	ENST00000489772	LRRC47	Q8N1G4	583 aa	Known RBP	13.11	□□□□□ -0.31
GGA1-222	ENST00000489772	GMCL1P1	Q8NEA9	526 aa		13.11	□□□□□ -0.31
GGA1-222	ENST00000489772	STAG1	Q8WVM7	1258 aa		13.11	□□□□□ -0.31
GGA1-222	ENST00000489772	NUDT12	Q9BQG2	462 aa		13.11	□□□□□ -0.31
GGA1-222	ENST00000489772	RAD50	Q92878	1312 aa		13.11	□□□□□ -0.31
GGA1-222	ENST00000489772	ELN	P15502	786 aa		13.1	□□□□□ -0.31
GGA1-222	ENST00000489772	NT5C2	P49902	561 aa		13.1	□□□□□ -0.31
GGA1-222	ENST00000489772	PLS1	Q14651	629 aa		13.1	□□□□□ -0.31
GGA1-222	ENST00000489772	IMMT	Q16891	758 aa	Known RBP	13.1	□□□□□ -0.31
GGA1-222	ENST00000489772	SLFN13	Q68D06	897 aa		13.1	□□□□□ -0.31
GGA1-222	ENST00000489772	ATG4C	Q96DT6	458 aa		13.1	□□□□□ -0.31
GGA1-222	ENST00000489772	NUP88	Q99567	741 aa	Predicted RBP	13.1	□□□□□ -0.31
GGA1-222	ENST00000489772	SLF1	Q9BQI6	1058 aa		13.1	□□□□□ -0.31
GGA1-222	ENST00000489772	SPATC1L	Q9H0A9	340 aa		13.1	□□□□□ -0.31
GGA1-222	ENST00000489772	IL17RB	Q9NRM6	502 aa		13.1	□□□□□ -0.31
GGA1-222	ENST00000489772	FBXO28	Q9NVF7	368 aa		13.1	□□□□□ -0.31
GGA1-222	ENST00000489772	PPP1R9A	Q9ULJ8	1098 aa		13.1	□□□□□ -0.31
GGA1-222	ENST00000489772	TACC3	Q9Y6A5	838 aa		13.1	□□□□□ -0.31
GGA1-222	ENST00000489772	POTEF	A5A3E0	1075 aa		13.09	□□□□□ -0.31
GGA1-222	ENST00000489772	NMT2	O60551	498 aa		13.09	□□□□□ -0.31
GGA1-222	ENST00000489772	XRCC5	P13010	732 aa	Known RBP	13.09	□□□□□ -0.31
GGA1-222	ENST00000489772	CYP2B6	P20813	491 aa		13.09	□□□□□ -0.31
GGA1-222	ENST00000489772	RGS2	P41220	211 aa		13.09	□□□□□ -0.31
GGA1-222	ENST00000489772	TBC1D10C	Q8IV04	446 aa		13.09	□□□□□ -0.31
GGA1-222	ENST00000489772	ESR2	Q92731	530 aa		13.09	□□□□□ -0.31
GGA1-222	ENST00000489772	MOV10L1	Q9BXT6	1211 aa	Known RBP	13.09	□□□□□ -0.31
GGA1-222	ENST00000489772	NBPF3	Q9H094	633 aa		13.09	□□□□□ -0.31
GGA1-222	ENST00000489772	ADAMTS5	Q9UNA0	930 aa		13.09	□□□□□ -0.31
GGA1-222	ENST00000489772	IVNS1ABP	Q9Y6Y0	642 aa		13.09	□□□□□ -0.31
GGA1-222	ENST00000489772	ZSWIM8	A7E2V4	1837 aa		13.09	□□□□□ -0.31
GGA1-222	ENST00000489772	SLC15A5	A6NIM6	579 aa		13.08	□□□□□ -0.31
GGA1-222	ENST00000489772	VWA5A	O00534	786 aa		13.08	□□□□□ -0.31
GGA1-222	ENST00000489772	HMGCR	P04035	888 aa		13.08	□□□□□ -0.31
GGA1-222	ENST00000489772	INHA	P05111	366 aa		13.08	□□□□□ -0.31
GGA1-222	ENST00000489772	CENPB	P07199	599 aa	Predicted RBP	13.08	□□□□□ -0.31
GGA1-222	ENST00000489772	BMP3	P12645	472 aa		13.08	□□□□□ -0.31
GGA1-222	ENST00000489772	CCL5	P13501	91 aa		13.08	□□□□□ -0.31
GGA1-222	ENST00000489772	SLC1A4	P43007	532 aa		13.08	□□□□□ -0.31
GGA1-222	ENST00000489772	MTFR1	Q15390	333 aa		13.08	□□□□□ -0.31
GGA1-222	ENST00000489772	MORN1	Q5T089	497 aa		13.08	□□□□□ -0.31
GGA1-222	ENST00000489772	TRMT44	Q8IYL2	757 aa	Known RBP	13.08	□□□□□ -0.31
GGA1-222	ENST00000489772	PRPF38A	Q8NAV1	312 aa	Known RBP	13.08	□□□□□ -0.31
GGA1-222	ENST00000489772	SHCBP1	Q8NEM2	672 aa		13.08	□□□□□ -0.31
GGA1-222	ENST00000489772	GMCL1	Q96IK5	515 aa		13.08	□□□□□ -0.31
GGA1-222	ENST00000489772	RNF208	Q9H0X6	261 aa		13.08	□□□□□ -0.31
GGA1-222	ENST00000489772	IL25	Q9H293	177 aa		13.08	□□□□□ -0.31
GGA1-222	ENST00000489772	MROH8	Q9H579	483 aa		13.08	□□□□□ -0.31
GGA1-222	ENST00000489772	TCP11L1	Q9NUJ3	509 aa		13.08	□□□□□ -0.31
GGA1-222	ENST00000489772	FEM1B	Q9UK73	627 aa		13.08	□□□□□ -0.31
GGA1-222	ENST00000489772	ISY1	Q9ULR0	285 aa	Known RBP	13.08	□□□□□ -0.31
GGA1-222	ENST00000489772	SLC25A27	O95847	323 aa		13.07	□□□□□ -0.32
GGA1-222	ENST00000489772	ERCC3	P19447	782 aa		13.07	□□□□□ -0.32
GGA1-222	ENST00000489772	PTPRE	P23469	700 aa		13.07	□□□□□ -0.32
GGA1-222	ENST00000489772	NOV	P48745	357 aa		13.07	□□□□□ -0.32
GGA1-222	ENST00000489772	MAP2K5	Q13163	448 aa		13.07	□□□□□ -0.32
GGA1-222	ENST00000489772	TMEM132B	Q14DG7	1078 aa		13.07	□□□□□ -0.32
GGA1-222	ENST00000489772	NCAPG2	Q86XI2	1143 aa		13.07	□□□□□ -0.32
GGA1-222	ENST00000489772	NKX2-3	Q8TAU0	364 aa		13.07	□□□□□ -0.32
GGA1-222	ENST00000489772	USP6NL	Q92738	828 aa		13.07	□□□□□ -0.32
GGA1-222	ENST00000489772	KIFC2	Q96AC6	838 aa		13.07	□□□□□ -0.32
GGA1-222	ENST00000489772	CTDP1	Q9Y5B0	961 aa	Predicted RBP	13.07	□□□□□ -0.32
GGA1-222	ENST00000489772	BRCA2	P51587	3418 aa		13.07	□□□□□ -0.32
GGA1-222	ENST00000489772	SGSM2	O43147	1006 aa		13.07	□□□□□ -0.32
GGA1-222	ENST00000489772	STRN	O43815	780 aa		13.07	□□□□□ -0.32
GGA1-222	ENST00000489772	ZBED4	O75132	1171 aa		13.07	□□□□□ -0.32
GGA1-222	ENST00000489772	TOP1	P11387	765 aa	Known RBP	13.07	□□□□□ -0.32
GGA1-222	ENST00000489772	ZKSCAN1	P17029	563 aa	Predicted RBP	13.07	□□□□□ -0.32
GGA1-222	ENST00000489772	EN2	P19622	333 aa	Predicted RBP	13.07	□□□□□ -0.32
GGA1-222	ENST00000489772	MCC	P23508	829 aa		13.07	□□□□□ -0.32
GGA1-222	ENST00000489772	COPB2	P35606	906 aa		13.07	□□□□□ -0.32
GGA1-222	ENST00000489772	STAT3	P40763	770 aa		13.07	□□□□□ -0.32
GGA1-222	ENST00000489772	GRB14	Q14449	540 aa		13.07	□□□□□ -0.32
GGA1-222	ENST00000489772	BMP2KL	Q5H9B9	411 aa		13.07	□□□□□ -0.32
GGA1-222	ENST00000489772	TTC14	Q96N46	770 aa		13.07	□□□□□ -0.32
GGA1-222	ENST00000489772	APBA2	Q99767	749 aa		13.07	□□□□□ -0.32
GGA1-222	ENST00000489772	MYH8	P13535	1937 aa		13.06	□□□□□ -0.32
GGA1-222	ENST00000489772	NEDD4	P46934	1319 aa		13.06	□□□□□ -0.32
GGA1-222	ENST00000489772	GREB1L	Q9C091	1923 aa	Predicted RBP	13.06	□□□□□ -0.32
GGA1-222	ENST00000489772	TMEM232	C9JQI7	657 aa		13.06	□□□□□ -0.32
GGA1-222	ENST00000489772	GJB1	P08034	283 aa		13.06	□□□□□ -0.32
GGA1-222	ENST00000489772	STAT2	P52630	851 aa		13.06	□□□□□ -0.32
GGA1-222	ENST00000489772	IK	Q13123	557 aa	Predicted RBP	13.06	□□□□□ -0.32
GGA1-222	ENST00000489772	CCDC178	Q5BJE1	867 aa		13.06	□□□□□ -0.32
GGA1-222	ENST00000489772	KIAA1211	Q6ZU35	1233 aa		13.06	□□□□□ -0.32
GGA1-222	ENST00000489772	DPP9	Q86TI2	863 aa		13.06	□□□□□ -0.32
GGA1-222	ENST00000489772	FAM160B2	Q86V87	743 aa		13.06	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms