RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 MYCP01106 439 aaPredicted RBP28.42■■■□□ 2.14
PTPN18-213ENST00000489215 INHAP05111 366 aa28.42■■■□□ 2.14
PTPN18-213ENST00000489215 GJB1P08034 283 aa28.42■■■□□ 2.14
PTPN18-213ENST00000489215 MTFR1Q15390 333 aa28.42■■■□□ 2.14
PTPN18-213ENST00000489215 WDR78Q5VTH9 848 aa28.42■■■□□ 2.14
PTPN18-213ENST00000489215 MROH8Q9H579 483 aa28.42■■■□□ 2.14
PTPN18-213ENST00000489215 EN2P19622 333 aaPredicted RBP28.41■■■□□ 2.14
PTPN18-213ENST00000489215 CYP2B6P20813 491 aa28.41■■■□□ 2.14
PTPN18-213ENST00000489215 PTPREP23469 700 aa28.41■■■□□ 2.14
PTPN18-213ENST00000489215 MORN1Q5T089 497 aa28.41■■■□□ 2.14
PTPN18-213ENST00000489215 FAM83BQ5T0W9 1011 aa28.41■■■□□ 2.14
PTPN18-213ENST00000489215 DSCC1Q9BVC3 393 aa28.41■■■□□ 2.14
PTPN18-213ENST00000489215 TOMM22Q9NS69 142 aa28.41■■■□□ 2.14
PTPN18-213ENST00000489215 CTNNA3Q9UI47 895 aa28.41■■■□□ 2.14
PTPN18-213ENST00000489215 PPP1R9AQ9ULJ8 1098 aa28.41■■■□□ 2.14
PTPN18-213ENST00000489215 ZNF213O14771 459 aa28.4■■■□□ 2.14
PTPN18-213ENST00000489215 SLC25A27O95847 323 aa28.4■■■□□ 2.14
PTPN18-213ENST00000489215 NDUFB10O96000 172 aa28.4■■■□□ 2.14
PTPN18-213ENST00000489215 COPB2P35606 906 aa28.4■■■□□ 2.14
PTPN18-213ENST00000489215 MFSD6Q6ZSS7 791 aa28.4■■■□□ 2.14
PTPN18-213ENST00000489215 PRPF38AQ8NAV1 312 aaKnown RBP28.4■■■□□ 2.14
PTPN18-213ENST00000489215 USP6NLQ92738 828 aa28.4■■■□□ 2.14
PTPN18-213ENST00000489215 ATG4CQ96DT6 458 aa28.4■■■□□ 2.14
PTPN18-213ENST00000489215 MOV10L1Q9BXT6 1211 aaKnown RBP28.4■■■□□ 2.14
PTPN18-213ENST00000489215 PLXNB2O15031 1838 aa28.4■■■□□ 2.14
PTPN18-213ENST00000489215 A0A0G2JMZ2 1700 aa28.4■■■□□ 2.14
PTPN18-213ENST00000489215 PARP14Q460N5 1801 aa28.39■■■□□ 2.14
PTPN18-213ENST00000489215 GJA8P48165 433 aa28.39■■■□□ 2.14
PTPN18-213ENST00000489215 MAP2K5Q13163 448 aa28.39■■■□□ 2.14
PTPN18-213ENST00000489215 PLS1Q14651 629 aa28.39■■■□□ 2.14
PTPN18-213ENST00000489215 AKNAD1Q5T1N1 836 aa28.39■■■□□ 2.14
PTPN18-213ENST00000489215 CENPQQ7L2Z9 268 aaPredicted RBP28.39■■■□□ 2.14
PTPN18-213ENST00000489215 APBA2Q99767 749 aa28.39■■■□□ 2.14
PTPN18-213ENST00000489215 SLF1Q9BQI6 1058 aa28.39■■■□□ 2.14
PTPN18-213ENST00000489215 STX8Q9UNK0 236 aa28.39■■■□□ 2.14
PTPN18-213ENST00000489215 RAD50Q92878 1312 aa28.39■■■□□ 2.13
PTPN18-213ENST00000489215 CENPFP49454 3210 aa28.38■■■□□ 2.13
PTPN18-213ENST00000489215 GSPT1P15170 499 aaKnown RBP28.38■■■□□ 2.13
PTPN18-213ENST00000489215 SLC5A4Q9NY91 659 aa28.38■■■□□ 2.13
PTPN18-213ENST00000489215 FEM1BQ9UK73 627 aa28.38■■■□□ 2.13
PTPN18-213ENST00000489215 VWA5AO00534 786 aa28.37■■■□□ 2.13
PTPN18-213ENST00000489215 FDX1P10109 184 aa28.37■■■□□ 2.13
PTPN18-213ENST00000489215 SLFN13Q68D06 897 aa28.37■■■□□ 2.13
PTPN18-213ENST00000489215 SAMD1Q6SPF0 538 aaPredicted RBP28.37■■■□□ 2.13
PTPN18-213ENST00000489215 STAG1Q8WVM7 1258 aa28.37■■■□□ 2.13
PTPN18-213ENST00000489215 TCP11L1Q9NUJ3 509 aa28.37■■■□□ 2.13
PTPN18-213ENST00000489215 CTDP1Q9Y5B0 961 aaPredicted RBP28.37■■■□□ 2.13
PTPN18-213ENST00000489215 RPTORQ8N122 1335 aa28.37■■■□□ 2.13
PTPN18-213ENST00000489215 ZKSCAN1P17029 563 aaPredicted RBP28.36■■■□□ 2.13
PTPN18-213ENST00000489215 GRB14Q14449 540 aa28.36■■■□□ 2.13
PTPN18-213ENST00000489215 RRP12Q5JTH9 1297 aaKnown RBP28.36■■■□□ 2.13
PTPN18-213ENST00000489215 ABRAQ8N0Z2 381 aa28.36■■■□□ 2.13
PTPN18-213ENST00000489215 UNC93B1Q9H1C4 597 aa28.36■■■□□ 2.13
PTPN18-213ENST00000489215 HMX1Q9NP08 348 aaPredicted RBP28.36■■■□□ 2.13
PTPN18-213ENST00000489215 FBXO28Q9NVF7 368 aa28.36■■■□□ 2.13
PTPN18-213ENST00000489215 SGPL1O95470 568 aa28.35■■■□□ 2.13
PTPN18-213ENST00000489215 HOXC6P09630 235 aa28.35■■■□□ 2.13
PTPN18-213ENST00000489215 BMP3P12645 472 aa28.35■■■□□ 2.13
PTPN18-213ENST00000489215 ERCC3P19447 782 aa28.35■■■□□ 2.13
PTPN18-213ENST00000489215 HAND2P61296 217 aa28.35■■■□□ 2.13
PTPN18-213ENST00000489215 TMEM132BQ14DG7 1078 aa28.35■■■□□ 2.13
PTPN18-213ENST00000489215 IMMTQ16891 758 aaKnown RBP28.35■■■□□ 2.13
PTPN18-213ENST00000489215 NCAPG2Q86XI2 1143 aa28.35■■■□□ 2.13
PTPN18-213ENST00000489215 LRRC47Q8N1G4 583 aaKnown RBP28.35■■■□□ 2.13
PTPN18-213ENST00000489215 CHURC1Q8WUH1 139 aa28.35■■■□□ 2.13
PTPN18-213ENST00000489215 GMCL1Q96IK5 515 aa28.35■■■□□ 2.13
PTPN18-213ENST00000489215 TTC14Q96N46 770 aa28.35■■■□□ 2.13
PTPN18-213ENST00000489215 INCENPQ9NQS7 918 aa28.35■■■□□ 2.13
PTPN18-213ENST00000489215 IL17RBQ9NRM6 502 aa28.35■■■□□ 2.13
PTPN18-213ENST00000489215 ZBED4O75132 1171 aa28.34■■■□□ 2.13
PTPN18-213ENST00000489215 STAT3P40763 770 aa28.34■■■□□ 2.13
PTPN18-213ENST00000489215 NOVP48745 357 aa28.34■■■□□ 2.13
PTPN18-213ENST00000489215 DPP9Q86TI2 863 aa28.34■■■□□ 2.13
PTPN18-213ENST00000489215 RIOX2Q8IUF8 465 aa28.34■■■□□ 2.13
PTPN18-213ENST00000489215 U2AF1L4Q8WU68 220 aaKnown RBP28.34■■■□□ 2.13
PTPN18-213ENST00000489215 TRIB2Q92519 343 aa28.34■■■□□ 2.13
PTPN18-213ENST00000489215 ESR2Q92731 530 aa28.34■■■□□ 2.13
PTPN18-213ENST00000489215 NUP88Q99567 741 aaPredicted RBP28.34■■■□□ 2.13
PTPN18-213ENST00000489215 PAK6Q9NQU5 681 aaPredicted RBP28.34■■■□□ 2.13
PTPN18-213ENST00000489215 SLC1A4P43007 532 aa28.33■■■□□ 2.13
PTPN18-213ENST00000489215 CCDC178Q5BJE1 867 aa28.33■■■□□ 2.13
PTPN18-213ENST00000489215 FAM160B2Q86V87 743 aa28.33■■■□□ 2.13
PTPN18-213ENST00000489215 COL11A1P12107 1806 aaPredicted RBP28.32■■■□□ 2.12
PTPN18-213ENST00000489215 PLA2G6O60733 806 aa28.32■■■□□ 2.12
PTPN18-213ENST00000489215 FCER1AP12319 257 aa28.32■■■□□ 2.12
PTPN18-213ENST00000489215 MFSD14CQ5VZR4 134 aa28.32■■■□□ 2.12
PTPN18-213ENST00000489215 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.32■■■□□ 2.123e-9■■■■□ 20.4
PTPN18-213ENST00000489215 ATP2A1O14983 1001 aa28.31■■■□□ 2.12
PTPN18-213ENST00000489215 CHMLP26374 656 aa28.31■■■□□ 2.12
PTPN18-213ENST00000489215 STAT2P52630 851 aa28.31■■■□□ 2.12
PTPN18-213ENST00000489215 MAP3K21Q5TCX8 1036 aa28.31■■■□□ 2.12
PTPN18-213ENST00000489215 TEX13BQ9BXU2 312 aa28.31■■■□□ 2.12
PTPN18-213ENST00000489215 ZNF214Q9UL59 606 aaPredicted RBP28.31■■■□□ 2.12
PTPN18-213ENST00000489215 TACC3Q9Y6A5 838 aa28.31■■■□□ 2.12
PTPN18-213ENST00000489215 ZNF236Q9UL36 1845 aa28.31■■■□□ 2.12
PTPN18-213ENST00000489215 TOP1P11387 765 aaKnown RBP28.3■■■□□ 2.12
PTPN18-213ENST00000489215 ADORA2AP29274 412 aa28.3■■■□□ 2.12
PTPN18-213ENST00000489215 OAZ1P54368 228 aa28.3■■■□□ 2.12
PTPN18-213ENST00000489215 RCSD1Q6JBY9 416 aa28.3■■■□□ 2.12
PTPN18-213ENST00000489215 KIFC2Q96AC6 838 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms