RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 ADCY9O60503 1353 aa19.46■□□□□ 0.71
NPHP4-209ENST00000489180 A0A087WWV3 80 aa19.45■□□□□ 0.7
NPHP4-209ENST00000489180 UBAP1LF5GYI3 381 aa19.45■□□□□ 0.7
NPHP4-209ENST00000489180 PPP2R5CQ13362 524 aa19.45■□□□□ 0.7
NPHP4-209ENST00000489180 PFDN4Q9NQP4 134 aa19.45■□□□□ 0.7
NPHP4-209ENST00000489180 KIAA0556O60303 1618 aa19.45■□□□□ 0.7
NPHP4-209ENST00000489180 DNMT1P26358 1616 aaKnown RBP19.45■□□□□ 0.7
NPHP4-209ENST00000489180 RGS16O15492 202 aaPredicted RBP19.45■□□□□ 0.7
NPHP4-209ENST00000489180 EEF2KMTQ96G04 330 aa19.45■□□□□ 0.7
NPHP4-209ENST00000489180 EFCAB8A8MWE9 144 aa19.45■□□□□ 0.7
NPHP4-209ENST00000489180 KRIT1O00522 736 aa19.45■□□□□ 0.7
NPHP4-209ENST00000489180 TAF12Q16514 161 aa19.45■□□□□ 0.7
NPHP4-209ENST00000489180 DDX17Q92841 729 aaKnown RBP19.45■□□□□ 0.7
NPHP4-209ENST00000489180 SH3BP5O60239 455 aa19.45■□□□□ 0.7
NPHP4-209ENST00000489180 BLIDQ8IZY5 108 aa19.45■□□□□ 0.7
NPHP4-209ENST00000489180 UHMK1Q8TAS1 419 aaKnown RBP19.45■□□□□ 0.7
NPHP4-209ENST00000489180 CCDC87Q9NVE4 849 aa19.45■□□□□ 0.7
NPHP4-209ENST00000489180 LRRC24Q50LG9 513 aa19.44■□□□□ 0.7
NPHP4-209ENST00000489180 HYOU1Q9Y4L1 999 aa19.44■□□□□ 0.7
NPHP4-209ENST00000489180 GOLGA8HP0CJ92 632 aa19.44■□□□□ 0.7
NPHP4-209ENST00000489180 ETF1P62495 437 aaKnown RBP19.44■□□□□ 0.7
NPHP4-209ENST00000489180 UNC5CLQ8IV45 518 aa19.44■□□□□ 0.7
NPHP4-209ENST00000489180 RASEFQ8IZ41 740 aa19.44■□□□□ 0.7
NPHP4-209ENST00000489180 MRFAP1L1Q96HT8 127 aa19.44■□□□□ 0.7
NPHP4-209ENST00000489180 LSG1Q9H089 658 aaKnown RBP19.44■□□□□ 0.7
NPHP4-209ENST00000489180 ARHGEF10O15013 1369 aa19.44■□□□□ 0.7
NPHP4-209ENST00000489180 SEC31AO94979 1220 aaKnown RBP19.44■□□□□ 0.7
NPHP4-209ENST00000489180 SLC8A3P57103 927 aa19.44■□□□□ 0.7
NPHP4-209ENST00000489180 RAB17Q9H0T7 212 aa19.44■□□□□ 0.7
NPHP4-209ENST00000489180 KDRP35968 1356 aa19.44■□□□□ 0.7
NPHP4-209ENST00000489180 I3L4J1 428 aa19.44■□□□□ 0.7
NPHP4-209ENST00000489180 TXNDC9O14530 226 aa19.44■□□□□ 0.7
NPHP4-209ENST00000489180 TSNAXIP1Q2TAA8 658 aa19.44■□□□□ 0.7
NPHP4-209ENST00000489180 NSMFQ6X4W1 530 aa19.44■□□□□ 0.7
NPHP4-209ENST00000489180 FANCBQ8NB91 859 aa19.44■□□□□ 0.7
NPHP4-209ENST00000489180 ZMYM3Q14202 1370 aa19.44■□□□□ 0.7
NPHP4-209ENST00000489180 MYOCDQ8IZQ8 938 aa19.44■□□□□ 0.7
NPHP4-209ENST00000489180 PPP1R13BQ96KQ4 1090 aa19.44■□□□□ 0.7
NPHP4-209ENST00000489180 NUCKS1Q9H1E3 243 aaKnown RBP19.44■□□□□ 0.7
NPHP4-209ENST00000489180 ABCC10Q5T3U5 1492 aa19.43■□□□□ 0.7
NPHP4-209ENST00000489180 STX2P32856 288 aa19.43■□□□□ 0.7
NPHP4-209ENST00000489180 CROCCP2Q86T23 111 aa19.43■□□□□ 0.7
NPHP4-209ENST00000489180 IL17REQ8NFR9 667 aa19.43■□□□□ 0.7
NPHP4-209ENST00000489180 FGAP02671 866 aa19.43■□□□□ 0.7
NPHP4-209ENST00000489180 PDIA3P30101 505 aaKnown RBP19.43■□□□□ 0.7
NPHP4-209ENST00000489180 CCDC89Q8N998 374 aa19.43■□□□□ 0.7
NPHP4-209ENST00000489180 MIPOL1Q8TD10 442 aa19.43■□□□□ 0.7
NPHP4-209ENST00000489180 SYMPKQ92797 1274 aaKnown RBP19.43■□□□□ 0.7
NPHP4-209ENST00000489180 VCX3BQ9H321 246 aa19.43■□□□□ 0.7
NPHP4-209ENST00000489180 SLC39A2Q9NP94 309 aa19.43■□□□□ 0.7
NPHP4-209ENST00000489180 PICK1Q9NRD5 415 aa19.43■□□□□ 0.7
NPHP4-209ENST00000489180 SEPT6Q14141 434 aa19.43■□□□□ 0.7
NPHP4-209ENST00000489180 CAPN12Q6ZSI9 719 aa19.43■□□□□ 0.7
NPHP4-209ENST00000489180 RPGRIP1Q96KN7 1286 aa19.43■□□□□ 0.7
NPHP4-209ENST00000489180 STK24Q9Y6E0 443 aa19.43■□□□□ 0.7
NPHP4-209ENST00000489180 XRCC5P13010 732 aaKnown RBP19.43■□□□□ 0.7
NPHP4-209ENST00000489180 VPS41P49754 854 aa19.43■□□□□ 0.7
NPHP4-209ENST00000489180 CTSWP56202 376 aa19.43■□□□□ 0.7
NPHP4-209ENST00000489180 EPSTI1Q96J88 318 aa19.43■□□□□ 0.7
NPHP4-209ENST00000489180 HAUS7Q99871 368 aa19.43■□□□□ 0.7
NPHP4-209ENST00000489180 PDE11AQ9HCR9 933 aa19.43■□□□□ 0.7
NPHP4-209ENST00000489180 PPFIA4O75335 1185 aa19.42■□□□□ 0.7
NPHP4-209ENST00000489180 POLR2FP61218 127 aaKnown RBP19.42■□□□□ 0.7
NPHP4-209ENST00000489180 NOP56O00567 594 aaKnown RBP19.42■□□□□ 0.7
NPHP4-209ENST00000489180 STK10O94804 968 aaKnown RBP19.42■□□□□ 0.7
NPHP4-209ENST00000489180 TNNI1P19237 187 aa19.42■□□□□ 0.7
NPHP4-209ENST00000489180 BSPRYQ5W0U4 402 aa19.42■□□□□ 0.7
NPHP4-209ENST00000489180 TNKSO95271 1327 aa19.42■□□□□ 0.7
NPHP4-209ENST00000489180 GYG1P46976 350 aa19.42■□□□□ 0.7
NPHP4-209ENST00000489180 HSPA2P54652 639 aa19.42■□□□□ 0.7
NPHP4-209ENST00000489180 ANKRD13CQ8N6S4 541 aa19.42■□□□□ 0.7
NPHP4-209ENST00000489180 ZWINTO95229 277 aa19.42■□□□□ 0.7
NPHP4-209ENST00000489180 BCAMP50895 628 aa19.42■□□□□ 0.7
NPHP4-209ENST00000489180 RPN1P04843 607 aaKnown RBP19.41■□□□□ 0.7
NPHP4-209ENST00000489180 STAT1P42224 750 aa19.41■□□□□ 0.7
NPHP4-209ENST00000489180 CAPS2Q9BXY5 557 aa19.41■□□□□ 0.7
NPHP4-209ENST00000489180 NT5C3AQ9H0P0 336 aa19.41■□□□□ 0.7
NPHP4-209ENST00000489180 TLR7Q9NYK1 1049 aaKnown RBP19.41■□□□□ 0.7
NPHP4-209ENST00000489180 TMOD4Q9NZQ9 345 aa19.41■□□□□ 0.7
NPHP4-209ENST00000489180 ARPP21Q9UBL0 812 aaPredicted RBP19.41■□□□□ 0.7
NPHP4-209ENST00000489180 GNA14O95837 355 aa19.41■□□□□ 0.7
NPHP4-209ENST00000489180 PDE6AP16499 860 aa19.41■□□□□ 0.7
NPHP4-209ENST00000489180 RILPQ96NA2 401 aa19.41■□□□□ 0.7
NPHP4-209ENST00000489180 GOLGA8KD6RF30 607 aa19.41■□□□□ 0.7
NPHP4-209ENST00000489180 ENC1O14682 589 aa19.41■□□□□ 0.7
NPHP4-209ENST00000489180 DPP8Q6V1X1 898 aaPredicted RBP19.41■□□□□ 0.7
NPHP4-209ENST00000489180 TTLL7Q6ZT98 887 aa19.41■□□□□ 0.7
NPHP4-209ENST00000489180 TTLL3Q9Y4R7 772 aa19.41■□□□□ 0.7
NPHP4-209ENST00000489180 SORBS3O60504 671 aa19.41■□□□□ 0.7
NPHP4-209ENST00000489180 DNM2P50570 870 aa19.41■□□□□ 0.7
NPHP4-209ENST00000489180 PANK4Q9NVE7 773 aa19.41■□□□□ 0.7
NPHP4-209ENST00000489180 CPSF2Q9P2I0 782 aaKnown RBP19.41■□□□□ 0.7
NPHP4-209ENST00000489180 CASP14P31944 242 aa19.41■□□□□ 0.7
NPHP4-209ENST00000489180 MAN1A1P33908 653 aa19.41■□□□□ 0.7
NPHP4-209ENST00000489180 LIG3P49916 1009 aa19.41■□□□□ 0.7
NPHP4-209ENST00000489180 PRKG1Q13976 671 aa19.41■□□□□ 0.7
NPHP4-209ENST00000489180 TCIRG1Q13488 830 aa19.4■□□□□ 0.7
NPHP4-209ENST00000489180 PRR16Q569H4 304 aa19.4■□□□□ 0.7
NPHP4-209ENST00000489180 C11orf57Q6ZUT1 292 aaPredicted RBP19.4■□□□□ 0.7
NPHP4-209ENST00000489180 IFNB1P01574 187 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms