RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 BACH2Q9BYV9 841 aa10.45□□□□□ -0.74
TRAPPC12-221ENST00000489032 CLEC4MQ9H2X3 399 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC12-221ENST00000489032 SH2B1Q9NRF2 756 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC12-221ENST00000489032 KIAA1522Q9P206 1035 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC12-221ENST00000489032 ADAMTS8Q9UP79 889 aa10.45□□□□□ -0.74
TRAPPC12-221ENST00000489032 SBF1O95248 1867 aa10.44□□□□□ -0.74
TRAPPC12-221ENST00000489032 CCER2I3L3R5 266 aa10.44□□□□□ -0.74
TRAPPC12-221ENST00000489032 RNMTO43148 476 aaKnown RBP10.44□□□□□ -0.74
TRAPPC12-221ENST00000489032 HTATSF1O43719 755 aaKnown RBP10.44□□□□□ -0.74
TRAPPC12-221ENST00000489032 LMOD3Q0VAK6 560 aa10.44□□□□□ -0.74
TRAPPC12-221ENST00000489032 TEFQ10587 303 aa10.44□□□□□ -0.74
TRAPPC12-221ENST00000489032 IKBKEQ14164 716 aa10.44□□□□□ -0.74
TRAPPC12-221ENST00000489032 NFE2L2Q16236 605 aa10.44□□□□□ -0.74
TRAPPC12-221ENST00000489032 DALRD3Q5D0E6 543 aaKnown RBP10.44□□□□□ -0.74
TRAPPC12-221ENST00000489032 NLGN1Q8N2Q7 840 aa10.44□□□□□ -0.74
TRAPPC12-221ENST00000489032 PLEKHF1Q96S99 279 aa10.44□□□□□ -0.74
TRAPPC12-221ENST00000489032 PIM2Q9P1W9 311 aa10.44□□□□□ -0.74
TRAPPC12-221ENST00000489032 GPN3Q9UHW5 284 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC12-221ENST00000489032 MKL2Q9ULH7 1088 aa10.44□□□□□ -0.74
TRAPPC12-221ENST00000489032 PPM1HQ9ULR3 514 aa10.44□□□□□ -0.74
TRAPPC12-221ENST00000489032 GLTPD2A6NH11 291 aa10.43□□□□□ -0.74
TRAPPC12-221ENST00000489032 SPDYE3A6NKU9 549 aa10.43□□□□□ -0.74
TRAPPC12-221ENST00000489032 GRIK5Q16478 980 aa10.43□□□□□ -0.74
TRAPPC12-221ENST00000489032 CCDC184Q52MB2 194 aa10.43□□□□□ -0.74
TRAPPC12-221ENST00000489032 RPS26P11Q5JNZ5 115 aaPredicted RBP10.43□□□□□ -0.74
TRAPPC12-221ENST00000489032 CCDC146Q8IYE0 955 aa10.43□□□□□ -0.74
TRAPPC12-221ENST00000489032 PNISRQ8TF01 805 aaKnown RBP10.43□□□□□ -0.74
TRAPPC12-221ENST00000489032 CEP44Q9C0F1 390 aa10.43□□□□□ -0.74
TRAPPC12-221ENST00000489032 ZNF576Q9H609 170 aa10.43□□□□□ -0.74
TRAPPC12-221ENST00000489032 SOX13Q9UN79 622 aa10.43□□□□□ -0.74
TRAPPC12-221ENST00000489032 KDM6AO15550 1401 aaPredicted RBP10.42□□□□□ -0.74
TRAPPC12-221ENST00000489032 H3BRJ5 948 aa10.42□□□□□ -0.74
TRAPPC12-221ENST00000489032 KCNA3P22001 575 aa10.42□□□□□ -0.74
TRAPPC12-221ENST00000489032 DGKGP49619 791 aa10.42□□□□□ -0.74
TRAPPC12-221ENST00000489032 LBX1P52954 281 aa10.42□□□□□ -0.74
TRAPPC12-221ENST00000489032 RIPK4P57078 832 aa10.42□□□□□ -0.74
TRAPPC12-221ENST00000489032 PPP2R3AQ06190 1150 aa10.42□□□□□ -0.74
TRAPPC12-221ENST00000489032 PCDH1Q08174 1060 aa10.42□□□□□ -0.74
TRAPPC12-221ENST00000489032 DMRTC2Q8IXT2 367 aaPredicted RBP10.42□□□□□ -0.74
TRAPPC12-221ENST00000489032 FAM9BQ8IZU0 186 aa10.42□□□□□ -0.74
TRAPPC12-221ENST00000489032 LINC00116Q8NCU8 138 aa10.42□□□□□ -0.74
TRAPPC12-221ENST00000489032 PIGBQ92521 554 aa10.42□□□□□ -0.74
TRAPPC12-221ENST00000489032 ITGB4P16144 1822 aa10.42□□□□□ -0.74
TRAPPC12-221ENST00000489032 C4AP0C0L4 1744 aa10.41□□□□□ -0.74
TRAPPC12-221ENST00000489032 LINC01387J3KSC0 135 aa10.41□□□□□ -0.74
TRAPPC12-221ENST00000489032 EIF4EBP3O60516 100 aaPredicted RBP10.41□□□□□ -0.74
TRAPPC12-221ENST00000489032 ARHGEF15O94989 841 aa10.41□□□□□ -0.74
TRAPPC12-221ENST00000489032 EPHA1P21709 976 aa10.41□□□□□ -0.74
TRAPPC12-221ENST00000489032 TMPOP42166 694 aaKnown RBP10.41□□□□□ -0.74
TRAPPC12-221ENST00000489032 RGS19P49795 217 aa10.41□□□□□ -0.74
TRAPPC12-221ENST00000489032 SLC7A3Q8WY07 619 aa10.41□□□□□ -0.74
TRAPPC12-221ENST00000489032 SLC52A2Q9HAB3 445 aa10.41□□□□□ -0.74
TRAPPC12-221ENST00000489032 LGR6Q9HBX8 967 aa10.41□□□□□ -0.74
TRAPPC12-221ENST00000489032 SCN11AQ9UI33 1791 aa10.4□□□□□ -0.74
TRAPPC12-221ENST00000489032 CCDC85CA6NKD9 419 aa10.4□□□□□ -0.74
TRAPPC12-221ENST00000489032 SCAMP3O14828 347 aaKnown RBP10.4□□□□□ -0.74
TRAPPC12-221ENST00000489032 RECKO95980 971 aa10.4□□□□□ -0.74
TRAPPC12-221ENST00000489032 CTSHP09668 335 aa10.4□□□□□ -0.74
TRAPPC12-221ENST00000489032 TPTE2Q6XPS3 522 aa10.4□□□□□ -0.74
TRAPPC12-221ENST00000489032 MCM10Q7L590 875 aa10.4□□□□□ -0.74
TRAPPC12-221ENST00000489032 BEND7Q8N7W2 519 aaPredicted RBP10.4□□□□□ -0.74
TRAPPC12-221ENST00000489032 C3orf58Q8NDZ4 430 aa10.4□□□□□ -0.74
TRAPPC12-221ENST00000489032 IL17REQ8NFR9 667 aa10.4□□□□□ -0.74
TRAPPC12-221ENST00000489032 CNTNAP1P78357 1384 aa10.39□□□□□ -0.75
TRAPPC12-221ENST00000489032 FAM181BA6NEQ2 426 aa10.39□□□□□ -0.75
TRAPPC12-221ENST00000489032 GNB5O14775 395 aa10.39□□□□□ -0.75
TRAPPC12-221ENST00000489032 NID1P14543 1247 aa10.39□□□□□ -0.75
TRAPPC12-221ENST00000489032 ST13P50502 369 aaKnown RBP10.39□□□□□ -0.75
TRAPPC12-221ENST00000489032 RAC1P63000 192 aa10.39□□□□□ -0.75
TRAPPC12-221ENST00000489032 CCDC85BQ15834 202 aaPredicted RBP10.39□□□□□ -0.75
TRAPPC12-221ENST00000489032 MEI1Q5TIA1 1274 aa10.39□□□□□ -0.75
TRAPPC12-221ENST00000489032 TXNDC11Q6PKC3 985 aa10.39□□□□□ -0.75
TRAPPC12-221ENST00000489032 VN1R5Q7Z5H4 357 aa10.39□□□□□ -0.75
TRAPPC12-221ENST00000489032 MAP4K3Q8IVH8 894 aa10.39□□□□□ -0.75
TRAPPC12-221ENST00000489032 TTC5Q8N0Z6 440 aa10.39□□□□□ -0.75
TRAPPC12-221ENST00000489032 ATG3Q9NT62 314 aa10.39□□□□□ -0.75
TRAPPC12-221ENST00000489032 ASAP1Q9ULH1 1129 aa10.39□□□□□ -0.75
TRAPPC12-221ENST00000489032 RRP7AQ9Y3A4 280 aaKnown RBP10.39□□□□□ -0.75
TRAPPC12-221ENST00000489032 BTBD11A6QL63 1104 aa10.38□□□□□ -0.75
TRAPPC12-221ENST00000489032 APAF1O14727 1248 aa10.38□□□□□ -0.75
TRAPPC12-221ENST00000489032 CENPBP07199 599 aaPredicted RBP10.38□□□□□ -0.75
TRAPPC12-221ENST00000489032 LMNB1P20700 586 aa10.38□□□□□ -0.75
TRAPPC12-221ENST00000489032 ZNF157P51786 506 aaPredicted RBP10.38□□□□□ -0.75
TRAPPC12-221ENST00000489032 DCTN1Q14203 1278 aa10.38□□□□□ -0.75
TRAPPC12-221ENST00000489032 TAF7Q15545 349 aaPredicted RBP10.38□□□□□ -0.75
TRAPPC12-221ENST00000489032 ADAMTSL4Q6UY14 1074 aa10.38□□□□□ -0.75
TRAPPC12-221ENST00000489032 WNT8BQ93098 351 aa10.38□□□□□ -0.75
TRAPPC12-221ENST00000489032 SRA1Q9HD15 236 aaKnown RBP10.38□□□□□ -0.75
TRAPPC12-221ENST00000489032 SEC31BQ9NQW1 1179 aa10.38□□□□□ -0.75
TRAPPC12-221ENST00000489032 TMEM39AQ9NV64 488 aa10.38□□□□□ -0.75
TRAPPC12-221ENST00000489032 NOP53Q9NZM5 478 aaKnown RBP10.38□□□□□ -0.75
TRAPPC12-221ENST00000489032 SAMM50Q9Y512 469 aa10.38□□□□□ -0.75
TRAPPC12-221ENST00000489032 CEMIPQ8WUJ3 1361 aa10.38□□□□□ -0.75
TRAPPC12-221ENST00000489032 MRC1P22897 1456 aa10.37□□□□□ -0.75
TRAPPC12-221ENST00000489032 FBXO24O75426 580 aa10.37□□□□□ -0.75
TRAPPC12-221ENST00000489032 ESRRAP11474 423 aaPredicted RBP10.37□□□□□ -0.75
TRAPPC12-221ENST00000489032 ZNF76P36508 570 aa10.37□□□□□ -0.75
TRAPPC12-221ENST00000489032 SNRPNP63162 240 aaKnown RBP10.37□□□□□ -0.75
TRAPPC12-221ENST00000489032 CALD1Q05682 793 aaKnown RBP10.37□□□□□ -0.75
TRAPPC12-221ENST00000489032 C19orf57Q0VDD7 668 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms