RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 G6PC3Q9BUM1 346 aa5.41□□□□□ -1.54
CD46-215ENST00000488596 POLR3KQ9Y2Y1 108 aaPredicted RBP5.41□□□□□ -1.54
CD46-215ENST00000488596 GRIN3BO60391 1043 aa5.4□□□□□ -1.54
CD46-215ENST00000488596 SEMA7AO75326 666 aa5.4□□□□□ -1.54
CD46-215ENST00000488596 BPNT1O95861 308 aa5.4□□□□□ -1.54
CD46-215ENST00000488596 BMP7P18075 431 aa5.4□□□□□ -1.54
CD46-215ENST00000488596 PDE6BP35913 854 aa5.4□□□□□ -1.54
CD46-215ENST00000488596 CHRNEQ04844 493 aa5.4□□□□□ -1.54
CD46-215ENST00000488596 SNX17Q15036 470 aa5.4□□□□□ -1.54
CD46-215ENST00000488596 LDLRAD1Q5T700 205 aa5.4□□□□□ -1.54
CD46-215ENST00000488596 ANKS4BQ8N8V4 417 aa5.4□□□□□ -1.54
CD46-215ENST00000488596 TMEM87AQ8NBN3 555 aa5.4□□□□□ -1.54
CD46-215ENST00000488596 SYTL4Q96C24 671 aaPredicted RBP5.4□□□□□ -1.54
CD46-215ENST00000488596 CCDC74BQ96LY2 380 aa5.4□□□□□ -1.54
CD46-215ENST00000488596 PARD6AQ9NPB6 346 aa5.4□□□□□ -1.54
CD46-215ENST00000488596 KLHL3Q9UH77 587 aa5.4□□□□□ -1.54
CD46-215ENST00000488596 HTR3BO95264 441 aa5.39□□□□□ -1.55
CD46-215ENST00000488596 RECKO95980 971 aa5.39□□□□□ -1.55
CD46-215ENST00000488596 DUSP4Q13115 394 aa5.39□□□□□ -1.55
CD46-215ENST00000488596 USHBP1Q8N6Y0 703 aa5.39□□□□□ -1.55
CD46-215ENST00000488596 RHOVQ96L33 236 aa5.39□□□□□ -1.55
CD46-215ENST00000488596 KIF2CQ99661 725 aa5.39□□□□□ -1.55
CD46-215ENST00000488596 ASPNQ9BXN1 380 aa5.39□□□□□ -1.55
CD46-215ENST00000488596 BCL11AQ9H165 835 aa5.39□□□□□ -1.55
CD46-215ENST00000488596 CNOT6Q9ULM6 557 aaKnown RBP5.39□□□□□ -1.55
CD46-215ENST00000488596 KCTD3Q9Y597 815 aa5.39□□□□□ -1.55
CD46-215ENST00000488596 VAMP1P23763 118 aa5.38□□□□□ -1.55
CD46-215ENST00000488596 SSPNQ14714 243 aa5.38□□□□□ -1.55
CD46-215ENST00000488596 CLEC16AQ2KHT3 1053 aa5.38□□□□□ -1.55
CD46-215ENST00000488596 NLRX1Q86UT6 975 aa5.38□□□□□ -1.55
CD46-215ENST00000488596 PHACTR4Q8IZ21 702 aa5.38□□□□□ -1.55
CD46-215ENST00000488596 FBXO27Q8NI29 283 aa5.38□□□□□ -1.55
CD46-215ENST00000488596 PANK1Q8TE04 598 aa5.38□□□□□ -1.55
CD46-215ENST00000488596 KCNC2Q96PR1 638 aa5.38□□□□□ -1.55
CD46-215ENST00000488596 ZCCHC4Q9H5U6 513 aa5.38□□□□□ -1.55
CD46-215ENST00000488596 A0A0G2JLL6 359 aaPredicted RBP5.37□□□□□ -1.55
CD46-215ENST00000488596 FOXD2O60548 495 aaPredicted RBP5.37□□□□□ -1.55
CD46-215ENST00000488596 USP2O75604 605 aaPredicted RBP5.37□□□□□ -1.55
CD46-215ENST00000488596 FAM160A1Q05DH4 1040 aa5.37□□□□□ -1.55
CD46-215ENST00000488596 ADGRF1Q5T601 910 aa5.37□□□□□ -1.55
CD46-215ENST00000488596 C9orf131Q5VYM1 1079 aa5.37□□□□□ -1.55
CD46-215ENST00000488596 MARCH10Q8NA82 808 aaPredicted RBP5.37□□□□□ -1.55
CD46-215ENST00000488596 TMEM74Q96NL1 305 aa5.37□□□□□ -1.55
CD46-215ENST00000488596 HDAC8Q9BY41 377 aa5.37□□□□□ -1.55
CD46-215ENST00000488596 OR14I1A6ND48 311 aa5.36□□□□□ -1.55
CD46-215ENST00000488596 MINDY4BA8MYZ0 360 aa5.36□□□□□ -1.55
CD46-215ENST00000488596 TRIM13O60858 407 aa5.36□□□□□ -1.55
CD46-215ENST00000488596 SYN1P17600 705 aa5.36□□□□□ -1.55
CD46-215ENST00000488596 RPL10P27635 214 aaKnown RBP5.36□□□□□ -1.55
CD46-215ENST00000488596 GBP1P32455 592 aa5.36□□□□□ -1.55
CD46-215ENST00000488596 GBP2P32456 591 aaPredicted RBP5.36□□□□□ -1.55
CD46-215ENST00000488596 SRSF3P84103 164 aaKnown RBP5.36□□□□□ -1.55
CD46-215ENST00000488596 NMIQ13287 307 aaPredicted RBP5.36□□□□□ -1.55
CD46-215ENST00000488596 ZNF385BQ569K4 471 aa5.36□□□□□ -1.55
CD46-215ENST00000488596 TCERG1LQ5VWI1 586 aa5.36□□□□□ -1.55
CD46-215ENST00000488596 DIEXFQ68CQ4 756 aaKnown RBP5.36□□□□□ -1.55
CD46-215ENST00000488596 GOLM1Q8NBJ4 401 aa5.36□□□□□ -1.55
CD46-215ENST00000488596 SYTL5Q8TDW5 730 aaPredicted RBP5.36□□□□□ -1.55
CD46-215ENST00000488596 RSRP1Q9BUV0 290 aa5.36□□□□□ -1.55
CD46-215ENST00000488596 FOXP3Q9BZS1 431 aa5.36□□□□□ -1.55
CD46-215ENST00000488596 MBD1Q9UIS9 605 aaPredicted RBP5.36□□□□□ -1.55
CD46-215ENST00000488596 TMEM82A0PJX8 343 aa5.35□□□□□ -1.55
CD46-215ENST00000488596 RGS13O14921 159 aa5.35□□□□□ -1.55
CD46-215ENST00000488596 UBOX5O94941 541 aa5.35□□□□□ -1.55
CD46-215ENST00000488596 GARTP22102 1010 aa5.35□□□□□ -1.55
CD46-215ENST00000488596 MPP2Q14168 576 aa5.35□□□□□ -1.55
CD46-215ENST00000488596 ZPBP2Q6X784 338 aa5.35□□□□□ -1.55
CD46-215ENST00000488596 RNF111Q6ZNA4 994 aa5.35□□□□□ -1.55
CD46-215ENST00000488596 REC114Q7Z4M0 266 aa5.35□□□□□ -1.55
CD46-215ENST00000488596 WAPLQ7Z5K2 1190 aa5.35□□□□□ -1.55
CD46-215ENST00000488596 TMC3Q7Z5M5 1100 aa5.35□□□□□ -1.55
CD46-215ENST00000488596 RELL1Q8IUW5 271 aa5.35□□□□□ -1.55
CD46-215ENST00000488596 ENOX1Q8TC92 643 aaKnown RBP5.35□□□□□ -1.55
CD46-215ENST00000488596 BORCS6Q96GS4 357 aa5.35□□□□□ -1.55
CD46-215ENST00000488596 TCTN2Q96GX1 697 aa5.35□□□□□ -1.55
CD46-215ENST00000488596 CRELD1Q96HD1 420 aa5.35□□□□□ -1.55
CD46-215ENST00000488596 ZMYM5Q9UJ78 669 aa5.35□□□□□ -1.55
CD46-215ENST00000488596 ADAMTS20P59510 1910 aa5.35□□□□□ -1.55
CD46-215ENST00000488596 SLC22A31A6NKX4 558 aa5.34□□□□□ -1.55
CD46-215ENST00000488596 NRDCO43847 1150 aa5.34□□□□□ -1.55
CD46-215ENST00000488596 PI3P19957 117 aa5.34□□□□□ -1.55
CD46-215ENST00000488596 SDHBP21912 280 aa5.34□□□□□ -1.55
CD46-215ENST00000488596 ITGAEP38570 1179 aa5.34□□□□□ -1.55
CD46-215ENST00000488596 EPHB3P54753 998 aa5.34□□□□□ -1.55
CD46-215ENST00000488596 HDLBPQ00341 1268 aaKnown RBP5.34□□□□□ -1.55
CD46-215ENST00000488596 SNW1Q13573 536 aaKnown RBP5.34□□□□□ -1.55
CD46-215ENST00000488596 SNAP47Q5SQN1 464 aa5.34□□□□□ -1.55
CD46-215ENST00000488596 CEP128Q6ZU80 1094 aa5.34□□□□□ -1.55
CD46-215ENST00000488596 DAGLBQ8NCG7 672 aa5.34□□□□□ -1.55
CD46-215ENST00000488596 MAP6Q96JE9 813 aa5.34□□□□□ -1.55
CD46-215ENST00000488596 HHIPL1Q96JK4 782 aa5.34□□□□□ -1.55
CD46-215ENST00000488596 ASCC2Q9H1I8 757 aaPredicted RBP5.34□□□□□ -1.55
CD46-215ENST00000488596 IGSF5Q9NSI5 407 aa5.34□□□□□ -1.55
CD46-215ENST00000488596 TCFL5Q9UL49 500 aa5.34□□□□□ -1.55
CD46-215ENST00000488596 SCAMP3O14828 347 aaKnown RBP5.33□□□□□ -1.56
CD46-215ENST00000488596 TLR3O15455 904 aaKnown RBP5.33□□□□□ -1.56
CD46-215ENST00000488596 TCF3P15923 654 aa5.33□□□□□ -1.56
CD46-215ENST00000488596 VIPR1P32241 457 aa5.33□□□□□ -1.56
CD46-215ENST00000488596 KIR2DL1P43626 348 aaPredicted RBP5.33□□□□□ -1.56
CD46-215ENST00000488596 KIR2DL2P43627 348 aaPredicted RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms