RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 TM4SF5O14894 197 aa6.86□□□□□ -1.31
R3HDM1-218ENST00000487294 NDUFB5O43674 189 aa6.86□□□□□ -1.31
R3HDM1-218ENST00000487294 IGHA2P01877 340 aa6.86□□□□□ -1.31
R3HDM1-218ENST00000487294 SRGNP10124 158 aa6.86□□□□□ -1.31
R3HDM1-218ENST00000487294 HSPA5P11021 654 aaKnown RBP6.86□□□□□ -1.31
R3HDM1-218ENST00000487294 EPHA1P21709 976 aa6.86□□□□□ -1.31
R3HDM1-218ENST00000487294 PEAR1Q5VY43 1037 aaPredicted RBP6.86□□□□□ -1.31
R3HDM1-218ENST00000487294 TBC1D9BQ66K14 1250 aa6.86□□□□□ -1.31
R3HDM1-218ENST00000487294 STYK1Q6J9G0 422 aa6.86□□□□□ -1.31
R3HDM1-218ENST00000487294 ZNF790Q6PG37 636 aa6.86□□□□□ -1.31
R3HDM1-218ENST00000487294 TXNDC11Q6PKC3 985 aa6.86□□□□□ -1.31
R3HDM1-218ENST00000487294 GALNT11Q8NCW6 608 aa6.86□□□□□ -1.31
R3HDM1-218ENST00000487294 WFDC12Q8WWY7 111 aa6.86□□□□□ -1.31
R3HDM1-218ENST00000487294 ZNF496Q96IT1 587 aaPredicted RBP6.86□□□□□ -1.31
R3HDM1-218ENST00000487294 OSMRQ99650 979 aa6.86□□□□□ -1.31
R3HDM1-218ENST00000487294 ZKSCAN3Q9BRR0 538 aa6.86□□□□□ -1.31
R3HDM1-218ENST00000487294 MUC3BQ9H195 1237 aa6.86□□□□□ -1.31
R3HDM1-218ENST00000487294 TAOK3Q9H2K8 898 aa6.86□□□□□ -1.31
R3HDM1-218ENST00000487294 PRDM10Q9NQV6 1147 aa6.86□□□□□ -1.31
R3HDM1-218ENST00000487294 RNF112Q9ULX5 631 aa6.86□□□□□ -1.31
R3HDM1-218ENST00000487294 SIPA1L3O60292 1781 aaPredicted RBP6.86□□□□□ -1.31
R3HDM1-218ENST00000487294 COL11A2P13942 1736 aaPredicted RBP6.86□□□□□ -1.31
R3HDM1-218ENST00000487294 SCN4AP35499 1836 aa6.85□□□□□ -1.31
R3HDM1-218ENST00000487294 CNTNAP1P78357 1384 aa6.85□□□□□ -1.31
R3HDM1-218ENST00000487294 IQCA1LA6NCM1 817 aa6.85□□□□□ -1.31
R3HDM1-218ENST00000487294 PDE2AO00408 941 aaPredicted RBP6.85□□□□□ -1.31
R3HDM1-218ENST00000487294 DIAPH1O60610 1272 aaKnown RBP6.85□□□□□ -1.31
R3HDM1-218ENST00000487294 POLR3DP05423 398 aaPredicted RBP6.85□□□□□ -1.31
R3HDM1-218ENST00000487294 EDN3P14138 238 aa6.85□□□□□ -1.31
R3HDM1-218ENST00000487294 PTPRAP18433 802 aa6.85□□□□□ -1.31
R3HDM1-218ENST00000487294 CANXP27824 592 aaKnown RBP6.85□□□□□ -1.31
R3HDM1-218ENST00000487294 CDC25BP30305 580 aa6.85□□□□□ -1.31
R3HDM1-218ENST00000487294 CLEC4GQ6UXB4 293 aa6.85□□□□□ -1.31
R3HDM1-218ENST00000487294 LDHDQ86WU2 507 aa6.85□□□□□ -1.31
R3HDM1-218ENST00000487294 TTC5Q8N0Z6 440 aa6.85□□□□□ -1.31
R3HDM1-218ENST00000487294 TMEM102Q8N9M5 508 aaPredicted RBP6.85□□□□□ -1.31
R3HDM1-218ENST00000487294 IL17REQ8NFR9 667 aa6.85□□□□□ -1.31
R3HDM1-218ENST00000487294 CITED4Q96RK1 184 aa6.85□□□□□ -1.31
R3HDM1-218ENST00000487294 SRA1Q9HD15 236 aaKnown RBP6.85□□□□□ -1.31
R3HDM1-218ENST00000487294 LATS2Q9NRM7 1088 aa6.85□□□□□ -1.31
R3HDM1-218ENST00000487294 COL3A1P02461 1466 aaPredicted RBP6.85□□□□□ -1.31
R3HDM1-218ENST00000487294 CAMTA2O94983 1202 aa6.84□□□□□ -1.31
R3HDM1-218ENST00000487294 HMOX1P09601 288 aa6.84□□□□□ -1.31
R3HDM1-218ENST00000487294 PRPF40BQ6NWY9 871 aaKnown RBP6.84□□□□□ -1.31
R3HDM1-218ENST00000487294 MAP4K3Q8IVH8 894 aa6.84□□□□□ -1.31
R3HDM1-218ENST00000487294 CNBD1Q8NA66 436 aa6.84□□□□□ -1.31
R3HDM1-218ENST00000487294 NXPE3Q969Y0 559 aa6.84□□□□□ -1.31
R3HDM1-218ENST00000487294 MASTLQ96GX5 879 aa6.84□□□□□ -1.31
R3HDM1-218ENST00000487294 SETDB2Q96T68 719 aa6.84□□□□□ -1.31
R3HDM1-218ENST00000487294 POLR3GLQ9BT43 218 aa6.84□□□□□ -1.31
R3HDM1-218ENST00000487294 SLX4Q8IY92 1834 aa6.84□□□□□ -1.31
R3HDM1-218ENST00000487294 BCORQ6W2J9 1755 aa6.84□□□□□ -1.31
R3HDM1-218ENST00000487294 ADAMTSL1Q8N6G6 1762 aa6.84□□□□□ -1.31
R3HDM1-218ENST00000487294 SNED1Q8TER0 1413 aa6.84□□□□□ -1.32
R3HDM1-218ENST00000487294 GNAT3A8MTJ3 354 aa6.83□□□□□ -1.32
R3HDM1-218ENST00000487294 GPR182O15218 404 aa6.83□□□□□ -1.32
R3HDM1-218ENST00000487294 DDNO94850 711 aaPredicted RBP6.83□□□□□ -1.32
R3HDM1-218ENST00000487294 NOS3P29474 1203 aa6.83□□□□□ -1.32
R3HDM1-218ENST00000487294 IREB2P48200 963 aaKnown RBP6.83□□□□□ -1.32
R3HDM1-218ENST00000487294 TEFQ10587 303 aa6.83□□□□□ -1.32
R3HDM1-218ENST00000487294 ORC1Q13415 861 aa6.83□□□□□ -1.32
R3HDM1-218ENST00000487294 ZNF622Q969S3 477 aaKnown RBP eCLIP6.83□□□□□ -1.328e-7■■■□□ 15.3
R3HDM1-218ENST00000487294 FMNL2Q96PY5 1086 aa6.83□□□□□ -1.32
R3HDM1-218ENST00000487294 TRAIPQ9BWF2 469 aa6.83□□□□□ -1.32
R3HDM1-218ENST00000487294 TAF1DQ9H5J8 278 aaPredicted RBP6.83□□□□□ -1.32
R3HDM1-218ENST00000487294 SOX13Q9UN79 622 aa6.83□□□□□ -1.32
R3HDM1-218ENST00000487294 RASSF10A6NK89 507 aa6.82□□□□□ -1.32
R3HDM1-218ENST00000487294 FZD9O00144 591 aa6.82□□□□□ -1.32
R3HDM1-218ENST00000487294 FSCN2O14926 492 aa6.82□□□□□ -1.32
R3HDM1-218ENST00000487294 FOXN1O15353 648 aa6.82□□□□□ -1.32
R3HDM1-218ENST00000487294 A1BGP04217 495 aa6.82□□□□□ -1.32
R3HDM1-218ENST00000487294 NPR1P16066 1061 aa6.82□□□□□ -1.32
R3HDM1-218ENST00000487294 CTCFP49711 727 aaPredicted RBP6.82□□□□□ -1.32
R3HDM1-218ENST00000487294 ST5P78524 1137 aa6.82□□□□□ -1.32
R3HDM1-218ENST00000487294 CCDC93Q567U6 631 aa6.82□□□□□ -1.32
R3HDM1-218ENST00000487294 SLC51AQ86UW1 340 aa6.82□□□□□ -1.32
R3HDM1-218ENST00000487294 GALNT12Q8IXK2 581 aa6.82□□□□□ -1.32
R3HDM1-218ENST00000487294 RTKN2Q8IZC4 609 aa6.82□□□□□ -1.32
R3HDM1-218ENST00000487294 RBCK1Q9BYM8 510 aa6.82□□□□□ -1.32
R3HDM1-218ENST00000487294 NIF3L1Q9GZT8 377 aa6.82□□□□□ -1.32
R3HDM1-218ENST00000487294 KCNK4Q9NYG8 393 aa6.82□□□□□ -1.32
R3HDM1-218ENST00000487294 BIN2Q9UBW5 565 aaPredicted RBP6.82□□□□□ -1.32
R3HDM1-218ENST00000487294 IVNS1ABPQ9Y6Y0 642 aa6.82□□□□□ -1.32
R3HDM1-218ENST00000487294 KIF7Q2M1P5 1343 aa6.81□□□□□ -1.32
R3HDM1-218ENST00000487294 H3BRJ5 948 aa6.81□□□□□ -1.32
R3HDM1-218ENST00000487294 ALX3O95076 343 aa6.81□□□□□ -1.32
R3HDM1-218ENST00000487294 KCNA1Q09470 495 aa6.81□□□□□ -1.32
R3HDM1-218ENST00000487294 PRR23CQ6ZRP0 262 aa6.81□□□□□ -1.32
R3HDM1-218ENST00000487294 PNMA8AQ86V59 439 aaPredicted RBP6.81□□□□□ -1.32
R3HDM1-218ENST00000487294 TMEM130Q8N3G9 435 aa6.81□□□□□ -1.32
R3HDM1-218ENST00000487294 MEGF10Q96KG7 1140 aa6.81□□□□□ -1.32
R3HDM1-218ENST00000487294 BHLHE41Q9C0J9 482 aaPredicted RBP6.81□□□□□ -1.32
R3HDM1-218ENST00000487294 MRPL18Q9H0U6 180 aaKnown RBP6.81□□□□□ -1.32
R3HDM1-218ENST00000487294 ZNF652Q9Y2D9 606 aa6.81□□□□□ -1.32
R3HDM1-218ENST00000487294 THSD7BQ9C0I4 1608 aa6.8□□□□□ -1.32
R3HDM1-218ENST00000487294 A0A1W2PP55 124 aa6.8□□□□□ -1.32
R3HDM1-218ENST00000487294 FAM177BA6PVY3 158 aa6.8□□□□□ -1.32
R3HDM1-218ENST00000487294 F8W735 103 aaPredicted RBP6.8□□□□□ -1.32
R3HDM1-218ENST00000487294 DDX3YO15523 660 aaKnown RBP6.8□□□□□ -1.32
R3HDM1-218ENST00000487294 CPNE3O75131 537 aaKnown RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms