RNA–Protein interactions for RNA: ENST00000485780.1

SHROOM3-207, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-207ENST00000485780 WDR46O15213 610 aaKnown RBP10.95□□□□□ -0.66
SHROOM3-207ENST00000485780 FMNL1O95466 1100 aaPredicted RBP10.95□□□□□ -0.66
SHROOM3-207ENST00000485780 GNRH1P01148 92 aa10.95□□□□□ -0.66
SHROOM3-207ENST00000485780 SNHG28P0DPA3 235 aa10.95□□□□□ -0.66
SHROOM3-207ENST00000485780 CYP2C8P10632 490 aa10.95□□□□□ -0.66
SHROOM3-207ENST00000485780 TOP1P11387 765 aaKnown RBP10.95□□□□□ -0.66
SHROOM3-207ENST00000485780 PSMA5P28066 241 aa10.95□□□□□ -0.66
SHROOM3-207ENST00000485780 HOXD10P28358 340 aa10.95□□□□□ -0.66
SHROOM3-207ENST00000485780 PSMC4P43686 418 aa10.95□□□□□ -0.66
SHROOM3-207ENST00000485780 PRMT2P55345 433 aa10.95□□□□□ -0.66
SHROOM3-207ENST00000485780 PABPC4Q13310 644 aaKnown RBP eCLIP10.95□□□□□ -0.66
SHROOM3-207ENST00000485780 TREML2Q5T2D2 321 aa10.95□□□□□ -0.66
SHROOM3-207ENST00000485780 DHX32Q7L7V1 743 aaKnown RBP10.95□□□□□ -0.66
SHROOM3-207ENST00000485780 TMEM87BQ96K49 555 aa10.95□□□□□ -0.66
SHROOM3-207ENST00000485780 TMEM47Q9BQJ4 181 aa10.95□□□□□ -0.66
SHROOM3-207ENST00000485780 UBAC1Q9BSL1 405 aa10.95□□□□□ -0.66
SHROOM3-207ENST00000485780 AGXT2Q9BYV1 514 aa10.95□□□□□ -0.66
SHROOM3-207ENST00000485780 ARHGAP39Q9C0H5 1083 aa10.95□□□□□ -0.66
SHROOM3-207ENST00000485780 GOPCQ9HD26 462 aa10.95□□□□□ -0.66
SHROOM3-207ENST00000485780 TMOD4Q9NZQ9 345 aa10.95□□□□□ -0.66
SHROOM3-207ENST00000485780 CLIP2Q9UDT6 1046 aa10.95□□□□□ -0.66
SHROOM3-207ENST00000485780 PNMA3Q9UL41 463 aa10.95□□□□□ -0.66
SHROOM3-207ENST00000485780 STX8Q9UNK0 236 aa10.95□□□□□ -0.66
SHROOM3-207ENST00000485780 PTCH2Q9Y6C5 1203 aa10.95□□□□□ -0.66
SHROOM3-207ENST00000485780 MYPNQ86TC9 1320 aa10.94□□□□□ -0.66
SHROOM3-207ENST00000485780 F5H6K3 240 aa10.94□□□□□ -0.66
SHROOM3-207ENST00000485780 SH2B2O14492 632 aaPredicted RBP10.94□□□□□ -0.66
SHROOM3-207ENST00000485780 PRC1O43663 620 aa10.94□□□□□ -0.66
SHROOM3-207ENST00000485780 NDUFB10O96000 172 aa10.94□□□□□ -0.66
SHROOM3-207ENST00000485780 OSBPP22059 807 aa10.94□□□□□ -0.66
SHROOM3-207ENST00000485780 LIFRP42702 1097 aa10.94□□□□□ -0.66
SHROOM3-207ENST00000485780 CAP1Q01518 475 aa10.94□□□□□ -0.66
SHROOM3-207ENST00000485780 KLRC3Q07444 240 aa10.94□□□□□ -0.66
SHROOM3-207ENST00000485780 SGMS1Q86VZ5 419 aa10.94□□□□□ -0.66
SHROOM3-207ENST00000485780 LRRC47Q8N1G4 583 aaKnown RBP10.94□□□□□ -0.66
SHROOM3-207ENST00000485780 GMCL1Q96IK5 515 aa10.94□□□□□ -0.66
SHROOM3-207ENST00000485780 JAKMIP1Q96N16 626 aaKnown RBP10.94□□□□□ -0.66
SHROOM3-207ENST00000485780 ZKSCAN3Q9BRR0 538 aa10.94□□□□□ -0.66
SHROOM3-207ENST00000485780 TMEM106CQ9BVX2 250 aa10.94□□□□□ -0.66
SHROOM3-207ENST00000485780 LY9Q9HBG7 655 aa10.94□□□□□ -0.66
SHROOM3-207ENST00000485780 ZSWIM6Q9HCJ5 1215 aa10.94□□□□□ -0.66
SHROOM3-207ENST00000485780 PLA2G6O60733 806 aa10.93□□□□□ -0.66
SHROOM3-207ENST00000485780 PDHBP11177 359 aa10.93□□□□□ -0.66
SHROOM3-207ENST00000485780 BCRP11274 1271 aa10.93□□□□□ -0.66
SHROOM3-207ENST00000485780 RPS6KB1P23443 525 aa10.93□□□□□ -0.66
SHROOM3-207ENST00000485780 FCGRTP55899 365 aa10.93□□□□□ -0.66
SHROOM3-207ENST00000485780 SART3Q15020 963 aaKnown RBP10.93□□□□□ -0.66
SHROOM3-207ENST00000485780 ZYXQ15942 572 aaKnown RBP10.93□□□□□ -0.66
SHROOM3-207ENST00000485780 BLOC1S2Q6QNY1 142 aa10.93□□□□□ -0.66
SHROOM3-207ENST00000485780 LBX2Q6XYB7 198 aa10.93□□□□□ -0.66
SHROOM3-207ENST00000485780 CATSPERGQ6ZRH7 1159 aa10.93□□□□□ -0.66
SHROOM3-207ENST00000485780 PNMA1Q8ND90 353 aa10.93□□□□□ -0.66
SHROOM3-207ENST00000485780 RAET1EQ8TD07 263 aa10.93□□□□□ -0.66
SHROOM3-207ENST00000485780 ARMC5Q96C12 935 aa10.93□□□□□ -0.66
SHROOM3-207ENST00000485780 TRIM47Q96LD4 638 aa10.93□□□□□ -0.66
SHROOM3-207ENST00000485780 KIF2CQ99661 725 aa10.93□□□□□ -0.66
SHROOM3-207ENST00000485780 SENP2Q9HC62 589 aa10.93□□□□□ -0.66
SHROOM3-207ENST00000485780 TNRC18O15417 2968 aaPredicted RBP10.93□□□□□ -0.66
SHROOM3-207ENST00000485780 MGAMO43451 1857 aa10.93□□□□□ -0.66
SHROOM3-207ENST00000485780 NID2Q14112 1375 aa10.92□□□□□ -0.66
SHROOM3-207ENST00000485780 ERICH2A1L162 156 aa10.92□□□□□ -0.66
SHROOM3-207ENST00000485780 USP17L15C9J2P7 530 aa10.92□□□□□ -0.66
SHROOM3-207ENST00000485780 USP17L13C9JLJ4 530 aa10.92□□□□□ -0.66
SHROOM3-207ENST00000485780 USP17L11C9JVI0 530 aa10.92□□□□□ -0.66
SHROOM3-207ENST00000485780 USP17L18D6R9N7 530 aa10.92□□□□□ -0.66
SHROOM3-207ENST00000485780 USP17L22D6RA61 530 aa10.92□□□□□ -0.66
SHROOM3-207ENST00000485780 USP17L17D6RBQ6 530 aa10.92□□□□□ -0.66
SHROOM3-207ENST00000485780 USP17L19D6RCP7 530 aa10.92□□□□□ -0.66
SHROOM3-207ENST00000485780 USP17L20D6RJB6 530 aa10.92□□□□□ -0.66
SHROOM3-207ENST00000485780 IFIT3O14879 490 aaKnown RBP10.92□□□□□ -0.66
SHROOM3-207ENST00000485780 CASTP20810 708 aaKnown RBP10.92□□□□□ -0.66
SHROOM3-207ENST00000485780 RCAN1P53805 252 aa10.92□□□□□ -0.66
SHROOM3-207ENST00000485780 EVCP57679 992 aa10.92□□□□□ -0.66
SHROOM3-207ENST00000485780 ATP2B2Q01814 1243 aa10.92□□□□□ -0.66
SHROOM3-207ENST00000485780 USP17L24Q0WX57 530 aa10.92□□□□□ -0.66
SHROOM3-207ENST00000485780 TROAPQ12815 778 aa10.92□□□□□ -0.66
SHROOM3-207ENST00000485780 WTAPQ15007 396 aa10.92□□□□□ -0.66
SHROOM3-207ENST00000485780 TMEM67Q5HYA8 995 aa10.92□□□□□ -0.66
SHROOM3-207ENST00000485780 IFIT1BQ5T764 474 aaKnown RBP10.92□□□□□ -0.66
SHROOM3-207ENST00000485780 SLFN13Q68D06 897 aa10.92□□□□□ -0.66
SHROOM3-207ENST00000485780 RUFY3Q7L099 469 aa10.92□□□□□ -0.66
SHROOM3-207ENST00000485780 CHST3Q7LGC8 479 aa10.92□□□□□ -0.66
SHROOM3-207ENST00000485780 TMTC2Q8N394 836 aa10.92□□□□□ -0.66
SHROOM3-207ENST00000485780 DCAF4Q8WV16 495 aa10.92□□□□□ -0.66
SHROOM3-207ENST00000485780 TBC1D32Q96NH3 1257 aa10.92□□□□□ -0.66
SHROOM3-207ENST00000485780 C22orf23Q9BZE7 217 aa10.92□□□□□ -0.66
SHROOM3-207ENST00000485780 ASCC2Q9H1I8 757 aaPredicted RBP10.92□□□□□ -0.66
SHROOM3-207ENST00000485780 ALDH8A1Q9H2A2 487 aaPredicted RBP10.92□□□□□ -0.66
SHROOM3-207ENST00000485780 RPAP3Q9H6T3 665 aaPredicted RBP10.92□□□□□ -0.66
SHROOM3-207ENST00000485780 SRRDQ9UH36 339 aa10.92□□□□□ -0.66
SHROOM3-207ENST00000485780 MYH6P13533 1939 aa10.92□□□□□ -0.66
SHROOM3-207ENST00000485780 SPDYE16A6NNV3 312 aaPredicted RBP10.91□□□□□ -0.66
SHROOM3-207ENST00000485780 DDAH1O94760 285 aa10.91□□□□□ -0.66
SHROOM3-207ENST00000485780 MYCP01106 439 aaPredicted RBP10.91□□□□□ -0.66
SHROOM3-207ENST00000485780 GCLCP48506 637 aaPredicted RBP10.91□□□□□ -0.66
SHROOM3-207ENST00000485780 IRX3P78415 501 aaPredicted RBP10.91□□□□□ -0.66
SHROOM3-207ENST00000485780 ZNF543Q08ER8 600 aa10.91□□□□□ -0.66
SHROOM3-207ENST00000485780 FAM83BQ5T0W9 1011 aa10.91□□□□□ -0.66
SHROOM3-207ENST00000485780 POTEEQ6S8J3 1075 aa10.91□□□□□ -0.66
SHROOM3-207ENST00000485780 BTNL9Q6UXG8 535 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms