RNA–Protein interactions for RNA: ENST00000485091.5

CCDC78-214, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,734 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-214ENST00000485091 TMX2Q9Y320 296 aa20.27■□□□□ 0.83
CCDC78-214ENST00000485091 WDR33Q9C0J8 1336 aaKnown RBP20.26■□□□□ 0.83
CCDC78-214ENST00000485091 TRAF5O00463 557 aa20.26■□□□□ 0.83
CCDC78-214ENST00000485091 KIF3CO14782 793 aa20.26■□□□□ 0.83
CCDC78-214ENST00000485091 BRD1O95696 1058 aa20.26■□□□□ 0.83
CCDC78-214ENST00000485091 NDUFB10O96000 172 aa20.26■□□□□ 0.83
CCDC78-214ENST00000485091 SNHG28P0DPA3 235 aa20.26■□□□□ 0.83
CCDC78-214ENST00000485091 SLC1A4P43007 532 aa20.26■□□□□ 0.83
CCDC78-214ENST00000485091 ASPRV1Q53RT3 343 aa20.26■□□□□ 0.83
CCDC78-214ENST00000485091 TTBK2Q6IQ55 1244 aa20.26■□□□□ 0.83
CCDC78-214ENST00000485091 MOB2Q70IA6 237 aa20.26■□□□□ 0.83
CCDC78-214ENST00000485091 FEZ1Q99689 392 aa20.26■□□□□ 0.83
CCDC78-214ENST00000485091 RNF26Q9BY78 433 aaPredicted RBP20.26■□□□□ 0.83
CCDC78-214ENST00000485091 STK36Q9NRP7 1315 aa20.26■□□□□ 0.83
CCDC78-214ENST00000485091 PRPF3O43395 683 aaKnown RBP20.25■□□□□ 0.83
CCDC78-214ENST00000485091 DEXIO95424 95 aa20.25■□□□□ 0.83
CCDC78-214ENST00000485091 ZNF543Q08ER8 600 aa20.25■□□□□ 0.83
CCDC78-214ENST00000485091 SLC35G1Q2M3R5 365 aa20.25■□□□□ 0.83
CCDC78-214ENST00000485091 GMCL1P1Q8NEA9 526 aa20.25■□□□□ 0.83
CCDC78-214ENST00000485091 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.25■□□□□ 0.83
CCDC78-214ENST00000485091 TNPO1Q92973 898 aaKnown RBP20.25■□□□□ 0.83
CCDC78-214ENST00000485091 C8orf76Q96K31 380 aa20.25■□□□□ 0.83
CCDC78-214ENST00000485091 CYTH3O43739 400 aa20.24■□□□□ 0.83
CCDC78-214ENST00000485091 ZSCAN22P10073 491 aaPredicted RBP20.24■□□□□ 0.83
CCDC78-214ENST00000485091 SLC16A2P36021 539 aa20.24■□□□□ 0.83
CCDC78-214ENST00000485091 C1QTNF8P60827 252 aa20.24■□□□□ 0.83
CCDC78-214ENST00000485091 MAP3K9P80192 1104 aa20.24■□□□□ 0.83
CCDC78-214ENST00000485091 KIAA1755Q5JYT7 1200 aa20.24■□□□□ 0.83
CCDC78-214ENST00000485091 LDHDQ86WU2 507 aa20.24■□□□□ 0.83
CCDC78-214ENST00000485091 DCAF4Q8WV16 495 aa20.24■□□□□ 0.83
CCDC78-214ENST00000485091 WASF1Q92558 559 aa20.24■□□□□ 0.83
CCDC78-214ENST00000485091 LZTS2Q9BRK4 669 aa20.24■□□□□ 0.83
CCDC78-214ENST00000485091 GOPCQ9HD26 462 aa20.24■□□□□ 0.83
CCDC78-214ENST00000485091 GINM1Q9NU53 330 aa20.24■□□□□ 0.83
CCDC78-214ENST00000485091 PTPRAP18433 802 aa20.24■□□□□ 0.83
CCDC78-214ENST00000485091 FOXD4L6Q3SYB3 417 aaPredicted RBP20.24■□□□□ 0.83
CCDC78-214ENST00000485091 FOXD4L3Q6VB84 417 aaPredicted RBP20.24■□□□□ 0.83
CCDC78-214ENST00000485091 SH2D4AQ9H788 454 aa20.24■□□□□ 0.83
CCDC78-214ENST00000485091 DOCK1Q14185 1865 aa20.24■□□□□ 0.83
CCDC78-214ENST00000485091 IREB2P48200 963 aaKnown RBP20.23■□□□□ 0.83
CCDC78-214ENST00000485091 VGLL4Q14135 290 aa20.23■□□□□ 0.83
CCDC78-214ENST00000485091 PKN1Q16512 942 aa20.23■□□□□ 0.83
CCDC78-214ENST00000485091 GPATCH4Q5T3I0 446 aaKnown RBP20.23■□□□□ 0.83
CCDC78-214ENST00000485091 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.23■□□□□ 0.83
CCDC78-214ENST00000485091 FERMT3Q86UX7 667 aa20.23■□□□□ 0.83
CCDC78-214ENST00000485091 HOMER1Q86YM7 354 aa20.23■□□□□ 0.83
CCDC78-214ENST00000485091 ZHX2Q9Y6X8 837 aa20.23■□□□□ 0.83
CCDC78-214ENST00000485091 BMP3P12645 472 aa20.22■□□□□ 0.83
CCDC78-214ENST00000485091 SPP2Q13103 211 aa20.22■□□□□ 0.83
CCDC78-214ENST00000485091 IKQ13123 557 aaPredicted RBP20.22■□□□□ 0.83
CCDC78-214ENST00000485091 DGKZQ13574 1117 aa20.22■□□□□ 0.83
CCDC78-214ENST00000485091 MCTP1Q6DN14 999 aa20.22■□□□□ 0.83
CCDC78-214ENST00000485091 VCPKMTQ9H867 229 aa20.22■□□□□ 0.83
CCDC78-214ENST00000485091 CSADQ9Y600 493 aa20.22■□□□□ 0.83
CCDC78-214ENST00000485091 F13A1P00488 732 aa20.22■□□□□ 0.83
CCDC78-214ENST00000485091 TRIM29Q14134 588 aa20.22■□□□□ 0.83
CCDC78-214ENST00000485091 NOL9Q5SY16 702 aaKnown RBP20.22■□□□□ 0.83
CCDC78-214ENST00000485091 GMCL1Q96IK5 515 aa20.22■□□□□ 0.83
CCDC78-214ENST00000485091 AS3MTQ9HBK9 375 aa20.22■□□□□ 0.83
CCDC78-214ENST00000485091 SYNPO2Q9UMS6 1093 aa20.22■□□□□ 0.83
CCDC78-214ENST00000485091 TRIM75PA6NK02 468 aa20.21■□□□□ 0.83
CCDC78-214ENST00000485091 TMEM232C9JQI7 657 aa20.21■□□□□ 0.83
CCDC78-214ENST00000485091 MTMR2Q13614 643 aa20.21■□□□□ 0.83
CCDC78-214ENST00000485091 FAM83BQ5T0W9 1011 aa20.21■□□□□ 0.83
CCDC78-214ENST00000485091 CHAMP1Q96JM3 812 aa20.21■□□□□ 0.83
CCDC78-214ENST00000485091 PIGSQ96S52 555 aa20.21■□□□□ 0.83
CCDC78-214ENST00000485091 SPZ1Q9BXG8 430 aa20.21■□□□□ 0.83
CCDC78-214ENST00000485091 VPS54Q9P1Q0 977 aa20.21■□□□□ 0.83
CCDC78-214ENST00000485091 SNCAIPQ9Y6H5 919 aa20.21■□□□□ 0.83
CCDC78-214ENST00000485091 USP17L10C9JJH3 530 aa20.2■□□□□ 0.82
CCDC78-214ENST00000485091 KRT40Q6A162 431 aa20.2■□□□□ 0.82
CCDC78-214ENST00000485091 ARMC9Q7Z3E5 817 aa20.2■□□□□ 0.82
CCDC78-214ENST00000485091 ADGRF4Q8IZF3 695 aa20.2■□□□□ 0.82
CCDC78-214ENST00000485091 ZNF280CQ8ND82 737 aa20.2■□□□□ 0.82
CCDC78-214ENST00000485091 FBXO18Q8NFZ0 1043 aa20.2■□□□□ 0.82
CCDC78-214ENST00000485091 RRP36Q96EU6 259 aaKnown RBP20.2■□□□□ 0.82
CCDC78-214ENST00000485091 ELP3Q9H9T3 547 aa20.2■□□□□ 0.82
CCDC78-214ENST00000485091 KCNJ14Q9UNX9 436 aa20.2■□□□□ 0.82
CCDC78-214ENST00000485091 BAZ2BQ9UIF8 2168 aaKnown RBP20.2■□□□□ 0.82
CCDC78-214ENST00000485091 TOMM70O94826 608 aa20.19■□□□□ 0.82
CCDC78-214ENST00000485091 SCG2P13521 617 aa20.19■□□□□ 0.82
CCDC78-214ENST00000485091 PDIA4P13667 645 aaKnown RBP20.19■□□□□ 0.82
CCDC78-214ENST00000485091 PFKFB3Q16875 520 aaPredicted RBP20.19■□□□□ 0.82
CCDC78-214ENST00000485091 SAMD1Q6SPF0 538 aaPredicted RBP20.19■□□□□ 0.82
CCDC78-214ENST00000485091 CNKSR2Q8WXI2 1034 aa20.19■□□□□ 0.82
CCDC78-214ENST00000485091 GPKOWQ92917 476 aaPredicted RBP eCLIP20.19■□□□□ 0.82
CCDC78-214ENST00000485091 CLMNQ96JQ2 1002 aa20.19■□□□□ 0.82
CCDC78-214ENST00000485091 KIAA1683Q9H0B3 1180 aa20.19■□□□□ 0.82
CCDC78-214ENST00000485091 RIOX1Q9H6W3 641 aa20.19■□□□□ 0.82
CCDC78-214ENST00000485091 MYH6P13533 1939 aa20.19■□□□□ 0.82
CCDC78-214ENST00000485091 SMARCA1P28370 1054 aa20.19■□□□□ 0.82
CCDC78-214ENST00000485091 ANKRD13AQ8IZ07 590 aa20.19■□□□□ 0.82
CCDC78-214ENST00000485091 WDR18Q9BV38 432 aa20.19■□□□□ 0.82
CCDC78-214ENST00000485091 JMJD4Q9H9V9 463 aa20.19■□□□□ 0.82
CCDC78-214ENST00000485091 RBM27Q9P2N5 1060 aaKnown RBP20.19■□□□□ 0.82
CCDC78-214ENST00000485091 SEC63Q9UGP8 760 aaKnown RBP20.19■□□□□ 0.82
CCDC78-214ENST00000485091 HEATR3Q7Z4Q2 680 aa20.18■□□□□ 0.82
CCDC78-214ENST00000485091 XBP1P17861 261 aa20.17■□□□□ 0.82
CCDC78-214ENST00000485091 BACE1P56817 501 aa20.17■□□□□ 0.82
CCDC78-214ENST00000485091 SNAP25P60880 206 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms