RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 FAM84BQ96KN1 310 aaPredicted RBP6.29□□□□□ -1.4
CCDC39-205ENST00000485055 DBNDD1Q9H9R9 158 aa6.29□□□□□ -1.4
CCDC39-205ENST00000485055 NOL7Q9UMY1 257 aaKnown RBP6.29□□□□□ -1.4
CCDC39-205ENST00000485055 EXOSC10Q01780 885 aaKnown RBP6.29□□□□□ -1.4
CCDC39-205ENST00000485055 CCDC57Q2TAC2 916 aa6.29□□□□□ -1.4
CCDC39-205ENST00000485055 TMEM95Q3KNT9 176 aa6.29□□□□□ -1.4
CCDC39-205ENST00000485055 GRAMD1BQ3KR37 738 aa6.29□□□□□ -1.4
CCDC39-205ENST00000485055 LMBR1LQ6UX01 489 aa6.29□□□□□ -1.4
CCDC39-205ENST00000485055 ATG9AQ7Z3C6 839 aa6.29□□□□□ -1.4
CCDC39-205ENST00000485055 ZDHHC15Q96MV8 337 aa6.29□□□□□ -1.4
CCDC39-205ENST00000485055 MPHOSPH8Q99549 860 aa6.29□□□□□ -1.4
CCDC39-205ENST00000485055 ZNF408Q9H9D4 720 aa6.29□□□□□ -1.4
CCDC39-205ENST00000485055 EGFL7Q9UHF1 273 aa6.29□□□□□ -1.4
CCDC39-205ENST00000485055 ZNF112Q9UJU3 913 aa6.29□□□□□ -1.4
CCDC39-205ENST00000485055 MGAMO43451 1857 aa6.29□□□□□ -1.4
CCDC39-205ENST00000485055 ELL2O00472 640 aaPredicted RBP6.28□□□□□ -1.4
CCDC39-205ENST00000485055 WNT10BO00744 389 aa6.28□□□□□ -1.4
CCDC39-205ENST00000485055 PTPN12Q05209 780 aaKnown RBP6.28□□□□□ -1.4
CCDC39-205ENST00000485055 OCLNQ16625 522 aa6.28□□□□□ -1.4
CCDC39-205ENST00000485055 NYAP1Q6ZVC0 841 aa6.28□□□□□ -1.4
CCDC39-205ENST00000485055 HOOK2Q96ED9 719 aa6.28□□□□□ -1.4
CCDC39-205ENST00000485055 KCNQ5Q9NR82 932 aa6.28□□□□□ -1.4
CCDC39-205ENST00000485055 CEP126Q9P2H0 1117 aa6.28□□□□□ -1.4
CCDC39-205ENST00000485055 MRVI1Q9Y6F6 885 aa6.28□□□□□ -1.4
CCDC39-205ENST00000485055 ZBED9Q6R2W3 1325 aa6.28□□□□□ -1.4
CCDC39-205ENST00000485055 hCG_1984214I3L0E3 225 aa6.28□□□□□ -1.4
CCDC39-205ENST00000485055 EYA2O00167 538 aa6.28□□□□□ -1.4
CCDC39-205ENST00000485055 CELF2O95319 508 aaKnown RBP6.28□□□□□ -1.4
CCDC39-205ENST00000485055 POU3F3P20264 500 aaPredicted RBP6.28□□□□□ -1.4
CCDC39-205ENST00000485055 NFX1Q12986 1120 aaKnown RBP6.28□□□□□ -1.4
CCDC39-205ENST00000485055 PSMD2Q13200 908 aa6.28□□□□□ -1.4
CCDC39-205ENST00000485055 NCOA4Q13772 614 aa6.28□□□□□ -1.4
CCDC39-205ENST00000485055 PUM3Q15397 648 aaKnown RBP6.28□□□□□ -1.4
CCDC39-205ENST00000485055 NOL9Q5SY16 702 aaKnown RBP6.28□□□□□ -1.4
CCDC39-205ENST00000485055 KRT26Q7Z3Y9 468 aa6.28□□□□□ -1.4
CCDC39-205ENST00000485055 TXNRD3Q86VQ6 643 aa6.28□□□□□ -1.4
CCDC39-205ENST00000485055 IFNL1Q8IU54 200 aa6.28□□□□□ -1.4
CCDC39-205ENST00000485055 ANKMY2Q8IV38 441 aa6.28□□□□□ -1.4
CCDC39-205ENST00000485055 CKAP2LQ8IYA6 745 aa6.28□□□□□ -1.4
CCDC39-205ENST00000485055 CERS5Q8N5B7 392 aa6.28□□□□□ -1.4
CCDC39-205ENST00000485055 LPIN2Q92539 896 aa6.28□□□□□ -1.4
CCDC39-205ENST00000485055 SEZ6LQ9BYH1 1024 aa6.28□□□□□ -1.4
CCDC39-205ENST00000485055 GLIS2Q9BZE0 524 aaPredicted RBP6.28□□□□□ -1.4
CCDC39-205ENST00000485055 DNAJC25Q9H1X3 360 aa6.28□□□□□ -1.4
CCDC39-205ENST00000485055 SLKQ9H2G2 1235 aaPredicted RBP6.28□□□□□ -1.4
CCDC39-205ENST00000485055 CLIC5Q9NZA1 410 aa6.28□□□□□ -1.4
CCDC39-205ENST00000485055 EVLQ9UI08 416 aaPredicted RBP6.28□□□□□ -1.4
CCDC39-205ENST00000485055 GAKO14976 1311 aa6.28□□□□□ -1.4
CCDC39-205ENST00000485055 IPO8O15397 1037 aaKnown RBP6.28□□□□□ -1.4
CCDC39-205ENST00000485055 PRPF3O43395 683 aaKnown RBP6.28□□□□□ -1.4
CCDC39-205ENST00000485055 ALDH1A1P00352 501 aa6.28□□□□□ -1.4
CCDC39-205ENST00000485055 GNAI3P08754 354 aa6.28□□□□□ -1.4
CCDC39-205ENST00000485055 NBPF7P0C2Y1 421 aaPredicted RBP6.28□□□□□ -1.4
CCDC39-205ENST00000485055 DAB2P98082 770 aa6.28□□□□□ -1.4
CCDC39-205ENST00000485055 DIXDC1Q155Q3 683 aa6.28□□□□□ -1.4
CCDC39-205ENST00000485055 DOK7Q18PE1 504 aa6.28□□□□□ -1.4
CCDC39-205ENST00000485055 TTLL5Q6EMB2 1281 aa6.28□□□□□ -1.4
CCDC39-205ENST00000485055 SULF1Q8IWU6 871 aa6.28□□□□□ -1.4
CCDC39-205ENST00000485055 LILRB2Q8N423 598 aa6.28□□□□□ -1.4
CCDC39-205ENST00000485055 AIDAQ96BJ3 306 aa6.28□□□□□ -1.4
CCDC39-205ENST00000485055 GPR101Q96P66 508 aaPredicted RBP6.28□□□□□ -1.4
CCDC39-205ENST00000485055 BICC1Q9H694 974 aaKnown RBP6.28□□□□□ -1.4
CCDC39-205ENST00000485055 SRA1Q9HD15 236 aaKnown RBP6.28□□□□□ -1.4
CCDC39-205ENST00000485055 CLEC11AQ9Y240 323 aa6.28□□□□□ -1.4
CCDC39-205ENST00000485055 ATRNL1Q5VV63 1379 aa6.27□□□□□ -1.41
CCDC39-205ENST00000485055 BICDL2A1A5D9 508 aa6.27□□□□□ -1.41
CCDC39-205ENST00000485055 NR1I2O75469 434 aa6.27□□□□□ -1.41
CCDC39-205ENST00000485055 HIBADHP31937 336 aaKnown RBP6.27□□□□□ -1.41
CCDC39-205ENST00000485055 IL15P40933 162 aaPredicted RBP6.27□□□□□ -1.41
CCDC39-205ENST00000485055 RASA3Q14644 834 aa6.27□□□□□ -1.41
CCDC39-205ENST00000485055 SETDB1Q15047 1291 aa6.27□□□□□ -1.41
CCDC39-205ENST00000485055 CCDC92Q53HC0 331 aaPredicted RBP6.27□□□□□ -1.41
CCDC39-205ENST00000485055 PDXDC1Q6P996 788 aa6.27□□□□□ -1.41
CCDC39-205ENST00000485055 LDHAL6AQ6ZMR3 332 aa6.27□□□□□ -1.41
CCDC39-205ENST00000485055 TEPSINQ96N21 525 aa6.27□□□□□ -1.41
CCDC39-205ENST00000485055 TMX1Q9H3N1 280 aa6.27□□□□□ -1.41
CCDC39-205ENST00000485055 GINM1Q9NU53 330 aa6.27□□□□□ -1.41
CCDC39-205ENST00000485055 C9orf78Q9NZ63 289 aaPredicted RBP6.27□□□□□ -1.41
CCDC39-205ENST00000485055 MYH7P12883 1935 aa6.27□□□□□ -1.41
CCDC39-205ENST00000485055 TREHO43280 583 aa6.27□□□□□ -1.41
CCDC39-205ENST00000485055 EGFRP00533 1210 aa6.27□□□□□ -1.41
CCDC39-205ENST00000485055 CTSHP09668 335 aa6.27□□□□□ -1.41
CCDC39-205ENST00000485055 SOX11P35716 441 aa6.27□□□□□ -1.41
CCDC39-205ENST00000485055 FMR1Q06787 632 aaKnown RBP eCLIP6.27□□□□□ -1.41
CCDC39-205ENST00000485055 TNFAIP1Q13829 316 aa6.27□□□□□ -1.41
CCDC39-205ENST00000485055 ACBD5Q5T8D3 534 aaPredicted RBP6.27□□□□□ -1.41
CCDC39-205ENST00000485055 SAMD7Q7Z3H4 446 aa6.27□□□□□ -1.41
CCDC39-205ENST00000485055 OGFOD1Q8N543 542 aa6.27□□□□□ -1.41
CCDC39-205ENST00000485055 WDR66Q8TBY9 1149 aa6.27□□□□□ -1.41
CCDC39-205ENST00000485055 SYMPKQ92797 1274 aaKnown RBP6.27□□□□□ -1.41
CCDC39-205ENST00000485055 ATP8A1Q9Y2Q0 1164 aa6.27□□□□□ -1.41
CCDC39-205ENST00000485055 CASP8AP2Q9UKL3 1982 aa6.26□□□□□ -1.41
CCDC39-205ENST00000485055 F6X3S4 739 aa6.26□□□□□ -1.41
CCDC39-205ENST00000485055 TRAF5O00463 557 aa6.26□□□□□ -1.41
CCDC39-205ENST00000485055 CBFA2T2O43439 604 aa6.26□□□□□ -1.41
CCDC39-205ENST00000485055 PIP5K1CO60331 668 aa6.26□□□□□ -1.41
CCDC39-205ENST00000485055 MYL3P08590 195 aa6.26□□□□□ -1.41
CCDC39-205ENST00000485055 RAB27AP51159 221 aa6.26□□□□□ -1.41
CCDC39-205ENST00000485055 GEMIN4P57678 1058 aaKnown RBP6.26□□□□□ -1.41
CCDC39-205ENST00000485055 SUPT20HL1Q3ZLR7 823 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms