RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 FLT3LGP49771 235 aa21.27■■□□□ 1
HDAC6-225ENST00000483506 PTH1RQ03431 593 aa21.27■■□□□ 1
HDAC6-225ENST00000483506 SLC9C1Q4G0N8 1177 aa21.27■■□□□ 1
HDAC6-225ENST00000483506 RRP12Q5JTH9 1297 aaKnown RBP21.27■■□□□ 1
HDAC6-225ENST00000483506 RAET1EQ8TD07 263 aa21.27■■□□□ 1
HDAC6-225ENST00000483506 ESR2Q92731 530 aa21.27■■□□□ 1
HDAC6-225ENST00000483506 ZNF333Q96JL9 665 aa21.27■■□□□ 1
HDAC6-225ENST00000483506 TOMM22Q9NS69 142 aa21.27■■□□□ 1
HDAC6-225ENST00000483506 STX8Q9UNK0 236 aa21.27■■□□□ 1
HDAC6-225ENST00000483506 NBPF11Q86T75 865 aa21.26■□□□□ 0.99
HDAC6-225ENST00000483506 NKX2-3Q8TAU0 364 aa21.26■□□□□ 0.99
HDAC6-225ENST00000483506 ATG4CQ96DT6 458 aa21.26■□□□□ 0.99
HDAC6-225ENST00000483506 GMCL1Q96IK5 515 aa21.26■□□□□ 0.99
HDAC6-225ENST00000483506 NUP88Q99567 741 aaPredicted RBP21.26■□□□□ 0.99
HDAC6-225ENST00000483506 FBXO28Q9NVF7 368 aa21.26■□□□□ 0.99
HDAC6-225ENST00000483506 U3KPZ7 1027 aaPredicted RBP21.26■□□□□ 0.99
HDAC6-225ENST00000483506 COL11A1P12107 1806 aaPredicted RBP21.26■□□□□ 0.99
HDAC6-225ENST00000483506 SLFN13Q68D06 897 aa21.25■□□□□ 0.99
HDAC6-225ENST00000483506 GPR142Q7Z601 462 aa21.25■□□□□ 0.99
HDAC6-225ENST00000483506 SLAIN1Q8ND83 568 aa21.25■□□□□ 0.99
HDAC6-225ENST00000483506 PXYLP1Q8TE99 480 aa21.25■□□□□ 0.99
HDAC6-225ENST00000483506 MAP4K1Q92918 833 aa21.25■□□□□ 0.99
HDAC6-225ENST00000483506 TTC14Q96N46 770 aa21.25■□□□□ 0.99
HDAC6-225ENST00000483506 SLF1Q9BQI6 1058 aa21.25■□□□□ 0.99
HDAC6-225ENST00000483506 ESYT1Q9BSJ8 1104 aa21.25■□□□□ 0.99
HDAC6-225ENST00000483506 SPATC1LQ9H0A9 340 aa21.25■□□□□ 0.99
HDAC6-225ENST00000483506 VWA5AO00534 786 aa21.24■□□□□ 0.99
HDAC6-225ENST00000483506 RAD21O60216 631 aa21.24■□□□□ 0.99
HDAC6-225ENST00000483506 GRK4P32298 578 aa21.24■□□□□ 0.99
HDAC6-225ENST00000483506 RCSD1Q6JBY9 416 aa21.24■□□□□ 0.99
HDAC6-225ENST00000483506 PLEKHH3Q7Z736 793 aa21.24■□□□□ 0.99
HDAC6-225ENST00000483506 SHCBP1Q8NEM2 672 aa21.24■□□□□ 0.99
HDAC6-225ENST00000483506 REPS2Q8NFH8 660 aa21.24■□□□□ 0.99
HDAC6-225ENST00000483506 SOCS4Q8WXH5 440 aa21.24■□□□□ 0.99
HDAC6-225ENST00000483506 USP6NLQ92738 828 aa21.24■□□□□ 0.99
HDAC6-225ENST00000483506 CNNM2Q9H8M5 875 aa21.24■□□□□ 0.99
HDAC6-225ENST00000483506 ZNF236Q9UL36 1845 aa21.24■□□□□ 0.99
HDAC6-225ENST00000483506 PLA2G6O60733 806 aa21.23■□□□□ 0.99
HDAC6-225ENST00000483506 CYP21A2P08686 494 aa21.23■□□□□ 0.99
HDAC6-225ENST00000483506 TOP1P11387 765 aaKnown RBP21.23■□□□□ 0.99
HDAC6-225ENST00000483506 RGS19P49795 217 aa21.23■□□□□ 0.99
HDAC6-225ENST00000483506 MORN1Q5T089 497 aa21.23■□□□□ 0.99
HDAC6-225ENST00000483506 SH3TC2Q8TF17 1288 aa21.23■□□□□ 0.99
HDAC6-225ENST00000483506 MOV10L1Q9BXT6 1211 aaKnown RBP21.23■□□□□ 0.99
HDAC6-225ENST00000483506 KRT23Q9C075 422 aa21.23■□□□□ 0.99
HDAC6-225ENST00000483506 LSG1Q9H089 658 aaKnown RBP21.23■□□□□ 0.99
HDAC6-225ENST00000483506 FEM1BQ9UK73 627 aa21.23■□□□□ 0.99
HDAC6-225ENST00000483506 BRCA2P51587 3418 aa21.22■□□□□ 0.99
HDAC6-225ENST00000483506 ADCY3O60266 1144 aa21.22■□□□□ 0.99
HDAC6-225ENST00000483506 KDM4AO75164 1064 aa21.22■□□□□ 0.99
HDAC6-225ENST00000483506 BMP3P12645 472 aa21.22■□□□□ 0.99
HDAC6-225ENST00000483506 XRCC5P13010 732 aaKnown RBP21.22■□□□□ 0.99
HDAC6-225ENST00000483506 TMEM132BQ14DG7 1078 aa21.22■□□□□ 0.99
HDAC6-225ENST00000483506 CCDC178Q5BJE1 867 aa21.22■□□□□ 0.99
HDAC6-225ENST00000483506 DGKHQ86XP1 1220 aa21.22■□□□□ 0.99
HDAC6-225ENST00000483506 PRPF38AQ8NAV1 312 aaKnown RBP21.22■□□□□ 0.99
HDAC6-225ENST00000483506 ANKS1AQ92625 1134 aa21.22■□□□□ 0.99
HDAC6-225ENST00000483506 NUDT12Q9BQG2 462 aa21.22■□□□□ 0.99
HDAC6-225ENST00000483506 TMEM47Q9BQJ4 181 aa21.22■□□□□ 0.99
HDAC6-225ENST00000483506 ZNF214Q9UL59 606 aaPredicted RBP21.22■□□□□ 0.99
HDAC6-225ENST00000483506 KIAA0100Q14667 2235 aaKnown RBP21.21■□□□□ 0.99
HDAC6-225ENST00000483506 B4E1Z4 1266 aa21.21■□□□□ 0.99
HDAC6-225ENST00000483506 SLC1A4P43007 532 aa21.21■□□□□ 0.99
HDAC6-225ENST00000483506 CCAR1Q8IX12 1150 aaKnown RBP21.21■□□□□ 0.99
HDAC6-225ENST00000483506 SLC15A5A6NIM6 579 aa21.2■□□□□ 0.98
HDAC6-225ENST00000483506 ATP2A1O14983 1001 aa21.2■□□□□ 0.98
HDAC6-225ENST00000483506 CDC45O75419 566 aa21.2■□□□□ 0.98
HDAC6-225ENST00000483506 PTPREP23469 700 aa21.2■□□□□ 0.98
HDAC6-225ENST00000483506 GRB14Q14449 540 aa21.2■□□□□ 0.98
HDAC6-225ENST00000483506 KIAA1211Q6ZU35 1233 aa21.2■□□□□ 0.98
HDAC6-225ENST00000483506 IQCA1Q86XH1 822 aa21.2■□□□□ 0.98
HDAC6-225ENST00000483506 RIOX2Q8IUF8 465 aa21.2■□□□□ 0.98
HDAC6-225ENST00000483506 DCAF4Q8WV16 495 aa21.2■□□□□ 0.98
HDAC6-225ENST00000483506 MROH8Q9H579 483 aa21.2■□□□□ 0.98
HDAC6-225ENST00000483506 ZSWIM5Q9P217 1185 aa21.2■□□□□ 0.98
HDAC6-225ENST00000483506 RBM8AQ9Y5S9 174 aaKnown RBP21.2■□□□□ 0.98
HDAC6-225ENST00000483506 STRNO43815 780 aa21.19■□□□□ 0.98
HDAC6-225ENST00000483506 SLC25A27O95847 323 aa21.19■□□□□ 0.98
HDAC6-225ENST00000483506 FDX1P10109 184 aa21.19■□□□□ 0.98
HDAC6-225ENST00000483506 ERCC3P19447 782 aa21.19■□□□□ 0.98
HDAC6-225ENST00000483506 MCCP23508 829 aa21.19■□□□□ 0.98
HDAC6-225ENST00000483506 COPB2P35606 906 aa21.19■□□□□ 0.98
HDAC6-225ENST00000483506 RGS2P41220 211 aa21.19■□□□□ 0.98
HDAC6-225ENST00000483506 STAT2P52630 851 aa21.19■□□□□ 0.98
HDAC6-225ENST00000483506 SOX10P56693 466 aa21.19■□□□□ 0.98
HDAC6-225ENST00000483506 FAM160B2Q86V87 743 aa21.19■□□□□ 0.98
HDAC6-225ENST00000483506 SLC38A10Q9HBR0 1119 aa21.19■□□□□ 0.98
HDAC6-225ENST00000483506 TMEM232C9JQI7 657 aa21.18■□□□□ 0.98
HDAC6-225ENST00000483506 HOXC6P09630 235 aa21.18■□□□□ 0.98
HDAC6-225ENST00000483506 SNHG28P0DPA3 235 aa21.18■□□□□ 0.98
HDAC6-225ENST00000483506 ELNP15502 786 aa21.18■□□□□ 0.98
HDAC6-225ENST00000483506 MAP2K5Q13163 448 aa21.18■□□□□ 0.98
HDAC6-225ENST00000483506 CASC1Q6TDU7 716 aa21.18■□□□□ 0.98
HDAC6-225ENST00000483506 TRMT44Q8IYL2 757 aaKnown RBP21.18■□□□□ 0.98
HDAC6-225ENST00000483506 ABRAQ8N0Z2 381 aa21.18■□□□□ 0.98
HDAC6-225ENST00000483506 CHURC1Q8WUH1 139 aa21.18■□□□□ 0.98
HDAC6-225ENST00000483506 ZSCAN10Q96SZ4 725 aaPredicted RBP21.18■□□□□ 0.98
HDAC6-225ENST00000483506 APBA2Q99767 749 aa21.18■□□□□ 0.98
HDAC6-225ENST00000483506 IVNS1ABPQ9Y6Y0 642 aa21.18■□□□□ 0.98
HDAC6-225ENST00000483506 STAT3P40763 770 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms