RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 HDAC8Q9BY41 377 aa6.15□□□□□ -1.42
GTF3A-207ENST00000482655 DDX41Q9UJV9 622 aaKnown RBP6.15□□□□□ -1.42
GTF3A-207ENST00000482655 FAM86C2PA6NEL3 165 aa6.14□□□□□ -1.43
GTF3A-207ENST00000482655 TNFRSF10CO14798 259 aa6.14□□□□□ -1.43
GTF3A-207ENST00000482655 RPL10P27635 214 aaKnown RBP6.14□□□□□ -1.43
GTF3A-207ENST00000482655 PCBP3P57721 371 aaKnown RBP6.14□□□□□ -1.43
GTF3A-207ENST00000482655 TEKQ02763 1124 aa6.14□□□□□ -1.43
GTF3A-207ENST00000482655 CHRNEQ04844 493 aa6.14□□□□□ -1.43
GTF3A-207ENST00000482655 TMC3Q7Z5M5 1100 aa6.14□□□□□ -1.43
GTF3A-207ENST00000482655 SPPL2CQ8IUH8 684 aa6.14□□□□□ -1.43
GTF3A-207ENST00000482655 LILRA2Q8N149 483 aa6.14□□□□□ -1.43
GTF3A-207ENST00000482655 MRRFQ96E11 262 aaKnown RBP6.14□□□□□ -1.43
GTF3A-207ENST00000482655 SLC9A7Q96T83 725 aa6.14□□□□□ -1.43
GTF3A-207ENST00000482655 PCDHB12Q9Y5F1 795 aa6.14□□□□□ -1.43
GTF3A-207ENST00000482655 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.13□□□□□ -1.43
GTF3A-207ENST00000482655 SIGLEC6O43699 453 aa6.13□□□□□ -1.43
GTF3A-207ENST00000482655 PRAMEF1O95521 474 aa6.13□□□□□ -1.43
GTF3A-207ENST00000482655 TRHRP34981 398 aaPredicted RBP6.13□□□□□ -1.43
GTF3A-207ENST00000482655 RACK1P63244 317 aaKnown RBP6.13□□□□□ -1.43
GTF3A-207ENST00000482655 SNW1Q13573 536 aaKnown RBP6.13□□□□□ -1.43
GTF3A-207ENST00000482655 PRR23BQ6ZRT6 265 aa6.13□□□□□ -1.43
GTF3A-207ENST00000482655 WAPLQ7Z5K2 1190 aa6.13□□□□□ -1.43
GTF3A-207ENST00000482655 TMEM192Q8IY95 271 aa6.13□□□□□ -1.43
GTF3A-207ENST00000482655 ANKS4BQ8N8V4 417 aa6.13□□□□□ -1.43
GTF3A-207ENST00000482655 TCTN2Q96GX1 697 aa6.13□□□□□ -1.43
GTF3A-207ENST00000482655 SPATA32Q96LK8 384 aa6.13□□□□□ -1.43
GTF3A-207ENST00000482655 DIRC2Q96SL1 478 aa6.13□□□□□ -1.43
GTF3A-207ENST00000482655 PPP1R16BQ96T49 567 aa6.13□□□□□ -1.43
GTF3A-207ENST00000482655 TM9SF2Q99805 663 aa6.13□□□□□ -1.43
GTF3A-207ENST00000482655 FOXP3Q9BZS1 431 aa6.13□□□□□ -1.43
GTF3A-207ENST00000482655 NSUN3Q9H649 340 aaKnown RBP6.13□□□□□ -1.43
GTF3A-207ENST00000482655 ZMYM5Q9UJ78 669 aa6.13□□□□□ -1.43
GTF3A-207ENST00000482655 FBXL21Q9UKT6 434 aa6.13□□□□□ -1.43
GTF3A-207ENST00000482655 TCFL5Q9UL49 500 aa6.13□□□□□ -1.43
GTF3A-207ENST00000482655 PPT2Q9UMR5 302 aa6.13□□□□□ -1.43
GTF3A-207ENST00000482655 COL9A2Q14055 689 aaPredicted RBP6.12□□□□□ -1.43
GTF3A-207ENST00000482655 ZNF124Q15973 351 aa6.12□□□□□ -1.43
GTF3A-207ENST00000482655 INTS3Q68E01 1043 aaKnown RBP6.12□□□□□ -1.43
GTF3A-207ENST00000482655 CRBNQ96SW2 442 aa6.12□□□□□ -1.43
GTF3A-207ENST00000482655 PRDM14Q9GZV8 571 aa6.12□□□□□ -1.43
GTF3A-207ENST00000482655 RNF32Q9H0A6 362 aa6.12□□□□□ -1.43
GTF3A-207ENST00000482655 EPB41L4BQ9H329 900 aa6.12□□□□□ -1.43
GTF3A-207ENST00000482655 C19orf44Q9H6X5 657 aa6.12□□□□□ -1.43
GTF3A-207ENST00000482655 DCP1AQ9NPI6 582 aaPredicted RBP6.12□□□□□ -1.43
GTF3A-207ENST00000482655 CHST7Q9NS84 486 aa6.12□□□□□ -1.43
GTF3A-207ENST00000482655 FKTNO75072 461 aa6.11□□□□□ -1.43
GTF3A-207ENST00000482655 SYPP08247 313 aa6.11□□□□□ -1.43
GTF3A-207ENST00000482655 MESP2Q0VG99 397 aa6.11□□□□□ -1.43
GTF3A-207ENST00000482655 PAK2Q13177 524 aa6.11□□□□□ -1.43
GTF3A-207ENST00000482655 AUHQ13825 339 aaKnown RBP6.11□□□□□ -1.43
GTF3A-207ENST00000482655 NR0B2Q15466 257 aa6.11□□□□□ -1.43
GTF3A-207ENST00000482655 CCDC144CPQ8IYA2 1237 aa6.11□□□□□ -1.43
GTF3A-207ENST00000482655 FBXO15Q8NCQ5 510 aaPredicted RBP6.11□□□□□ -1.43
GTF3A-207ENST00000482655 SLC6A17Q9H1V8 727 aa6.11□□□□□ -1.43
GTF3A-207ENST00000482655 CWC22Q9HCG8 908 aaKnown RBP6.11□□□□□ -1.43
GTF3A-207ENST00000482655 SUCOQ9UBS9 1254 aaKnown RBP6.11□□□□□ -1.43
GTF3A-207ENST00000482655 GPR160Q9UJ42 338 aa6.11□□□□□ -1.43
GTF3A-207ENST00000482655 BTBD11A6QL63 1104 aa6.1□□□□□ -1.43
GTF3A-207ENST00000482655 MEIS1O00470 390 aa6.1□□□□□ -1.43
GTF3A-207ENST00000482655 ACRP10323 421 aa6.1□□□□□ -1.43
GTF3A-207ENST00000482655 ENDOUP21128 410 aaKnown RBP6.1□□□□□ -1.43
GTF3A-207ENST00000482655 SLC14A2Q15849 920 aa6.1□□□□□ -1.43
GTF3A-207ENST00000482655 SYDE1Q6ZW31 735 aaPredicted RBP6.1□□□□□ -1.43
GTF3A-207ENST00000482655 NT5DC4Q86YG4 428 aa6.1□□□□□ -1.43
GTF3A-207ENST00000482655 TAB3Q8N5C8 712 aaPredicted RBP6.1□□□□□ -1.43
GTF3A-207ENST00000482655 USHBP1Q8N6Y0 703 aa6.1□□□□□ -1.43
GTF3A-207ENST00000482655 LINC00116Q8NCU8 138 aa6.1□□□□□ -1.43
GTF3A-207ENST00000482655 BHLHE22Q8NFJ8 381 aaPredicted RBP6.1□□□□□ -1.43
GTF3A-207ENST00000482655 SMARCC1Q92922 1105 aaPredicted RBP6.1□□□□□ -1.43
GTF3A-207ENST00000482655 GPRASP2Q96D09 838 aa6.1□□□□□ -1.43
GTF3A-207ENST00000482655 DSCC1Q9BVC3 393 aa6.1□□□□□ -1.43
GTF3A-207ENST00000482655 GFOD1Q9NXC2 390 aa6.1□□□□□ -1.43
GTF3A-207ENST00000482655 DBX1A6NMT0 343 aa6.09□□□□□ -1.43
GTF3A-207ENST00000482655 GUCY2CP25092 1073 aa6.09□□□□□ -1.43
GTF3A-207ENST00000482655 PMS1P54277 932 aaKnown RBP6.09□□□□□ -1.43
GTF3A-207ENST00000482655 CCDC81Q6ZN84 652 aa6.09□□□□□ -1.43
GTF3A-207ENST00000482655 METTL16Q86W50 562 aaKnown RBP6.09□□□□□ -1.43
GTF3A-207ENST00000482655 RBBP8NLQ8NC74 664 aaPredicted RBP6.09□□□□□ -1.43
GTF3A-207ENST00000482655 RGS22Q8NE09 1264 aa6.09□□□□□ -1.43
GTF3A-207ENST00000482655 LINC01599Q8WXQ3 324 aa6.09□□□□□ -1.43
GTF3A-207ENST00000482655 MAP6Q96JE9 813 aa6.09□□□□□ -1.43
GTF3A-207ENST00000482655 GINM1Q9NU53 330 aa6.09□□□□□ -1.43
GTF3A-207ENST00000482655 PRR13Q9NZ81 148 aa6.09□□□□□ -1.43
GTF3A-207ENST00000482655 EFR3BQ9Y2G0 817 aa6.09□□□□□ -1.43
GTF3A-207ENST00000482655 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.09□□□□□ -1.43
GTF3A-207ENST00000482655 CCDC180Q9P1Z9 1646 aa6.08□□□□□ -1.44
GTF3A-207ENST00000482655 NFIBO00712 420 aa6.08□□□□□ -1.44
GTF3A-207ENST00000482655 USP2O75604 605 aaPredicted RBP6.08□□□□□ -1.44
GTF3A-207ENST00000482655 RAP1GAPP47736 663 aa6.08□□□□□ -1.44
GTF3A-207ENST00000482655 HDLBPQ00341 1268 aaKnown RBP6.08□□□□□ -1.44
GTF3A-207ENST00000482655 FZD5Q13467 585 aa6.08□□□□□ -1.44
GTF3A-207ENST00000482655 SNX17Q15036 470 aa6.08□□□□□ -1.44
GTF3A-207ENST00000482655 BBS9Q3SYG4 887 aa6.08□□□□□ -1.44
GTF3A-207ENST00000482655 TIGD5Q53EQ6 642 aa6.08□□□□□ -1.44
GTF3A-207ENST00000482655 C9orf131Q5VYM1 1079 aa6.08□□□□□ -1.44
GTF3A-207ENST00000482655 TDRD10Q5VZ19 366 aaKnown RBP6.08□□□□□ -1.44
GTF3A-207ENST00000482655 CWF19L1Q69YN2 538 aaKnown RBP6.08□□□□□ -1.44
GTF3A-207ENST00000482655 CEP128Q6ZU80 1094 aa6.08□□□□□ -1.44
GTF3A-207ENST00000482655 LSRQ86X29 649 aaPredicted RBP6.08□□□□□ -1.44
GTF3A-207ENST00000482655 IRF2BP1Q8IU81 584 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 239.4 ms