RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 SBNO2Q9Y2G9 1366 aa7.65□□□□□ -1.18
UPF3A-207ENST00000481131 RAXQ9Y2V3 346 aa7.65□□□□□ -1.18
UPF3A-207ENST00000481131 SV2CQ496J9 727 aa7.64□□□□□ -1.19
UPF3A-207ENST00000481131 PLEKHG4Q58EX7 1191 aa7.64□□□□□ -1.19
UPF3A-207ENST00000481131 OGFOD3Q6PK18 319 aa7.64□□□□□ -1.19
UPF3A-207ENST00000481131 PRR23CQ6ZRP0 262 aa7.64□□□□□ -1.19
UPF3A-207ENST00000481131 APBA2Q99767 749 aa7.64□□□□□ -1.19
UPF3A-207ENST00000481131 PRDM14Q9GZV8 571 aa7.64□□□□□ -1.19
UPF3A-207ENST00000481131 ARHGEF4Q9NR80 690 aa7.64□□□□□ -1.19
UPF3A-207ENST00000481131 PRR33A8MZF0 331 aa7.63□□□□□ -1.19
UPF3A-207ENST00000481131 TBX1O43435 398 aa7.63□□□□□ -1.19
UPF3A-207ENST00000481131 CDC45O75419 566 aa7.63□□□□□ -1.19
UPF3A-207ENST00000481131 CAPNS1P04632 268 aa7.63□□□□□ -1.19
UPF3A-207ENST00000481131 ITGAVP06756 1048 aa7.63□□□□□ -1.19
UPF3A-207ENST00000481131 ARTNQ5T4W7 220 aa7.63□□□□□ -1.19
UPF3A-207ENST00000481131 FOXB2Q5VYV0 432 aa7.63□□□□□ -1.19
UPF3A-207ENST00000481131 SGSM3Q96HU1 749 aa7.63□□□□□ -1.19
UPF3A-207ENST00000481131 TBC1D32Q96NH3 1257 aa7.63□□□□□ -1.19
UPF3A-207ENST00000481131 PRDM5Q9NQX1 630 aaPredicted RBP7.63□□□□□ -1.19
UPF3A-207ENST00000481131 WHRNQ9P202 907 aa7.63□□□□□ -1.19
UPF3A-207ENST00000481131 STOML1Q9UBI4 398 aa7.63□□□□□ -1.19
UPF3A-207ENST00000481131 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.63□□□□□ -1.19
UPF3A-207ENST00000481131 U3KQE9 123 aa7.63□□□□□ -1.19
UPF3A-207ENST00000481131 FAM170BA6NMN3 283 aa7.62□□□□□ -1.19
UPF3A-207ENST00000481131 NAT2P11245 290 aa7.62□□□□□ -1.19
UPF3A-207ENST00000481131 ZNF445P59923 1031 aa7.62□□□□□ -1.19
UPF3A-207ENST00000481131 TKFCQ3LXA3 575 aa7.62□□□□□ -1.19
UPF3A-207ENST00000481131 TMC3Q7Z5M5 1100 aa7.62□□□□□ -1.19
UPF3A-207ENST00000481131 ZNF227Q86WZ6 799 aa7.62□□□□□ -1.19
UPF3A-207ENST00000481131 HOMER1Q86YM7 354 aa7.62□□□□□ -1.19
UPF3A-207ENST00000481131 LRRC47Q8N1G4 583 aaKnown RBP7.62□□□□□ -1.19
UPF3A-207ENST00000481131 ZBTB38Q8NAP3 1195 aaPredicted RBP7.62□□□□□ -1.19
UPF3A-207ENST00000481131 DTWD2Q8NBA8 298 aa7.62□□□□□ -1.19
UPF3A-207ENST00000481131 ADCY4Q8NFM4 1077 aa7.62□□□□□ -1.19
UPF3A-207ENST00000481131 APPBP2Q92624 585 aa7.62□□□□□ -1.19
UPF3A-207ENST00000481131 MFSD14AQ96MC6 490 aa7.62□□□□□ -1.19
UPF3A-207ENST00000481131 GBP3Q9H0R5 595 aa7.62□□□□□ -1.19
UPF3A-207ENST00000481131 IQCA1LA6NCM1 817 aa7.61□□□□□ -1.19
UPF3A-207ENST00000481131 CBX7O95931 251 aa7.61□□□□□ -1.19
UPF3A-207ENST00000481131 CYP7A1P22680 504 aa7.61□□□□□ -1.19
UPF3A-207ENST00000481131 SFRP5Q5T4F7 317 aa7.61□□□□□ -1.19
UPF3A-207ENST00000481131 YOD1Q5VVQ6 348 aaPredicted RBP7.61□□□□□ -1.19
UPF3A-207ENST00000481131 ZNF765Q7L2R6 523 aa7.61□□□□□ -1.19
UPF3A-207ENST00000481131 ADAT2Q7Z6V5 191 aaKnown RBP7.61□□□□□ -1.19
UPF3A-207ENST00000481131 FBXL6Q8N531 539 aa7.61□□□□□ -1.19
UPF3A-207ENST00000481131 LRRN4CLQ8ND94 238 aa7.61□□□□□ -1.19
UPF3A-207ENST00000481131 GIMAP7Q8NHV1 300 aa7.61□□□□□ -1.19
UPF3A-207ENST00000481131 MRGPRX3Q96LB0 322 aa7.61□□□□□ -1.19
UPF3A-207ENST00000481131 PCDHB12Q9Y5F1 795 aa7.61□□□□□ -1.19
UPF3A-207ENST00000481131 KRTAP9-6A0A140TA67 174 aa7.6□□□□□ -1.19
UPF3A-207ENST00000481131 ANKRD62A6NC57 917 aa7.6□□□□□ -1.19
UPF3A-207ENST00000481131 PPM1BO75688 479 aa7.6□□□□□ -1.19
UPF3A-207ENST00000481131 F13BP05160 661 aa7.6□□□□□ -1.19
UPF3A-207ENST00000481131 GRIA2P42262 883 aa7.6□□□□□ -1.19
UPF3A-207ENST00000481131 PPP2R2AP63151 447 aa7.6□□□□□ -1.19
UPF3A-207ENST00000481131 C22orf34Q6ZV56 151 aa7.6□□□□□ -1.19
UPF3A-207ENST00000481131 KIAA0907Q7Z7F0 614 aaPredicted RBP7.6□□□□□ -1.19
UPF3A-207ENST00000481131 ARHGEF39Q8N4T4 335 aa7.6□□□□□ -1.19
UPF3A-207ENST00000481131 BRF1Q92994 677 aa7.6□□□□□ -1.19
UPF3A-207ENST00000481131 PPP1R14AQ96A00 147 aa7.6□□□□□ -1.19
UPF3A-207ENST00000481131 RCC1LQ96I51 464 aaKnown RBP7.6□□□□□ -1.19
UPF3A-207ENST00000481131 COX4I2Q96KJ9 171 aa7.6□□□□□ -1.19
UPF3A-207ENST00000481131 EXOC2Q96KP1 924 aa7.6□□□□□ -1.19
UPF3A-207ENST00000481131 GFOD1Q9NXC2 390 aa7.6□□□□□ -1.19
UPF3A-207ENST00000481131 CGGBP1Q9UFW8 167 aaPredicted RBP7.6□□□□□ -1.19
UPF3A-207ENST00000481131 FBXL21Q9UKT6 434 aa7.6□□□□□ -1.19
UPF3A-207ENST00000481131 MINPP1Q9UNW1 487 aa7.6□□□□□ -1.19
UPF3A-207ENST00000481131 EMC9Q9Y3B6 208 aa7.6□□□□□ -1.19
UPF3A-207ENST00000481131 FHOD1Q9Y613 1164 aa7.6□□□□□ -1.19
UPF3A-207ENST00000481131 CAPN6Q9Y6Q1 641 aa7.6□□□□□ -1.19
UPF3A-207ENST00000481131 SHISA3A0PJX4 238 aa7.59□□□□□ -1.19
UPF3A-207ENST00000481131 AGRPO00253 132 aa7.59□□□□□ -1.19
UPF3A-207ENST00000481131 IGF2BP3O00425 579 aaKnown RBP eCLIP7.59□□□□□ -1.19
UPF3A-207ENST00000481131 ZNF865P0CJ78 1059 aaPredicted RBP7.59□□□□□ -1.19
UPF3A-207ENST00000481131 ITGA4P13612 1032 aa7.59□□□□□ -1.19
UPF3A-207ENST00000481131 TNK2Q07912 1038 aa7.59□□□□□ -1.19
UPF3A-207ENST00000481131 LONRF2Q1L5Z9 754 aa7.59□□□□□ -1.19
UPF3A-207ENST00000481131 TMEM67Q5HYA8 995 aa7.59□□□□□ -1.19
UPF3A-207ENST00000481131 RNF43Q68DV7 783 aa7.59□□□□□ -1.19
UPF3A-207ENST00000481131 C16orf86Q6ZW13 317 aa7.59□□□□□ -1.19
UPF3A-207ENST00000481131 BVESQ8NE79 360 aa7.59□□□□□ -1.19
UPF3A-207ENST00000481131 ZSWIM2Q8NEG5 633 aa7.59□□□□□ -1.19
UPF3A-207ENST00000481131 SYTL5Q8TDW5 730 aaPredicted RBP7.59□□□□□ -1.19
UPF3A-207ENST00000481131 LRP2BPQ9P2M1 347 aa7.59□□□□□ -1.19
UPF3A-207ENST00000481131 A0A087WZG4 1122 aa7.58□□□□□ -1.2
UPF3A-207ENST00000481131 PPP1R12AO14974 1030 aaPredicted RBP7.58□□□□□ -1.2
UPF3A-207ENST00000481131 L1CAMP32004 1257 aa7.58□□□□□ -1.2
UPF3A-207ENST00000481131 KIR3DL1P43629 444 aa7.58□□□□□ -1.2
UPF3A-207ENST00000481131 FAM209AQ5JX71 171 aa7.58□□□□□ -1.2
UPF3A-207ENST00000481131 TRIM59Q8IWR1 403 aa7.58□□□□□ -1.2
UPF3A-207ENST00000481131 FIBCD1Q8N539 461 aa7.58□□□□□ -1.2
UPF3A-207ENST00000481131 KISS1RQ969F8 398 aaPredicted RBP7.58□□□□□ -1.2
UPF3A-207ENST00000481131 AARSD1Q9BTE6 412 aaKnown RBP7.58□□□□□ -1.2
UPF3A-207ENST00000481131 NOL6Q9H6R4 1146 aaKnown RBP7.58□□□□□ -1.2
UPF3A-207ENST00000481131 ZFP64Q9NPA5 681 aa7.58□□□□□ -1.2
UPF3A-207ENST00000481131 GTF2IRD1Q9UHL9 959 aa7.58□□□□□ -1.2
UPF3A-207ENST00000481131 AKT3Q9Y243 479 aa7.58□□□□□ -1.2
UPF3A-207ENST00000481131 SUGT1Q9Y2Z0 365 aa7.58□□□□□ -1.2
UPF3A-207ENST00000481131 SIGLEC6O43699 453 aa7.57□□□□□ -1.2
UPF3A-207ENST00000481131 PRAMEF1O95521 474 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms