RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 SLC38A3Q99624 504 aa8.66□□□□□ -1.02
COMMD3-212ENST00000479958 SHISA3A0PJX4 238 aa8.65□□□□□ -1.02
COMMD3-212ENST00000479958 DUSP4Q13115 394 aa8.65□□□□□ -1.02
COMMD3-212ENST00000479958 RGS22Q8NE09 1264 aa8.65□□□□□ -1.02
COMMD3-212ENST00000479958 SLC9A7Q96T83 725 aa8.65□□□□□ -1.02
COMMD3-212ENST00000479958 TM9SF2Q99805 663 aa8.65□□□□□ -1.02
COMMD3-212ENST00000479958 MKRN2Q9H000 416 aaKnown RBP8.65□□□□□ -1.02
COMMD3-212ENST00000479958 FBXL21Q9UKT6 434 aa8.65□□□□□ -1.02
COMMD3-212ENST00000479958 ZNF503-AS2A6NEH8 195 aa8.64□□□□□ -1.03
COMMD3-212ENST00000479958 HPXP02790 462 aa8.64□□□□□ -1.03
COMMD3-212ENST00000479958 PCBP3P57721 371 aaKnown RBP8.64□□□□□ -1.03
COMMD3-212ENST00000479958 MLANAQ16655 118 aa8.64□□□□□ -1.03
COMMD3-212ENST00000479958 KSR1Q8IVT5 923 aa8.64□□□□□ -1.03
COMMD3-212ENST00000479958 SLC6A18Q96N87 628 aa8.64□□□□□ -1.03
COMMD3-212ENST00000479958 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.64□□□□□ -1.03
COMMD3-212ENST00000479958 ZGLP1P0C6A0 271 aa8.63□□□□□ -1.03
COMMD3-212ENST00000479958 CHRNEQ04844 493 aa8.63□□□□□ -1.03
COMMD3-212ENST00000479958 PAK2Q13177 524 aa8.63□□□□□ -1.03
COMMD3-212ENST00000479958 PKN1Q16512 942 aa8.63□□□□□ -1.03
COMMD3-212ENST00000479958 METTL16Q86W50 562 aaKnown RBP8.63□□□□□ -1.03
COMMD3-212ENST00000479958 NT5DC4Q86YG4 428 aa8.63□□□□□ -1.03
COMMD3-212ENST00000479958 KRTAP19-1Q8IUB9 90 aa8.63□□□□□ -1.03
COMMD3-212ENST00000479958 TMEM192Q8IY95 271 aa8.63□□□□□ -1.03
COMMD3-212ENST00000479958 LILRA2Q8N149 483 aa8.63□□□□□ -1.03
COMMD3-212ENST00000479958 TAB3Q8N5C8 712 aaPredicted RBP8.63□□□□□ -1.03
COMMD3-212ENST00000479958 USHBP1Q8N6Y0 703 aa8.63□□□□□ -1.03
COMMD3-212ENST00000479958 RBBP8NLQ8NC74 664 aaPredicted RBP8.63□□□□□ -1.03
COMMD3-212ENST00000479958 TCTN2Q96GX1 697 aa8.63□□□□□ -1.03
COMMD3-212ENST00000479958 LIN37Q96GY3 246 aaPredicted RBP8.63□□□□□ -1.03
COMMD3-212ENST00000479958 ZNF512BQ96KM6 892 aaPredicted RBP8.63□□□□□ -1.03
COMMD3-212ENST00000479958 FAM84AQ96KN4 292 aa8.63□□□□□ -1.03
COMMD3-212ENST00000479958 PRDM14Q9GZV8 571 aa8.63□□□□□ -1.03
COMMD3-212ENST00000479958 WIZO95785 1651 aa8.63□□□□□ -1.03
COMMD3-212ENST00000479958 FITM1A5D6W6 292 aa8.63□□□□□ -1.03
COMMD3-212ENST00000479958 HDAC8Q9BY41 377 aa8.63□□□□□ -1.03
COMMD3-212ENST00000479958 SUCOQ9UBS9 1254 aaKnown RBP8.63□□□□□ -1.03
COMMD3-212ENST00000479958 PCDHB12Q9Y5F1 795 aa8.63□□□□□ -1.03
COMMD3-212ENST00000479958 SIGLEC6O43699 453 aa8.62□□□□□ -1.03
COMMD3-212ENST00000479958 RPL10P27635 214 aaKnown RBP8.62□□□□□ -1.03
COMMD3-212ENST00000479958 TEKQ02763 1124 aa8.62□□□□□ -1.03
COMMD3-212ENST00000479958 AUHQ13825 339 aaKnown RBP8.62□□□□□ -1.03
COMMD3-212ENST00000479958 TMC3Q7Z5M5 1100 aa8.62□□□□□ -1.03
COMMD3-212ENST00000479958 LINC00116Q8NCU8 138 aa8.62□□□□□ -1.03
COMMD3-212ENST00000479958 ZMYM5Q9UJ78 669 aa8.62□□□□□ -1.03
COMMD3-212ENST00000479958 PPT2Q9UMR5 302 aa8.62□□□□□ -1.03
COMMD3-212ENST00000479958 C8AP07357 584 aa8.61□□□□□ -1.03
COMMD3-212ENST00000479958 ERVFC1P60507 584 aa8.61□□□□□ -1.03
COMMD3-212ENST00000479958 HDLBPQ00341 1268 aaKnown RBP8.61□□□□□ -1.03
COMMD3-212ENST00000479958 NR0B2Q15466 257 aa8.61□□□□□ -1.03
COMMD3-212ENST00000479958 ZNF648Q5T619 568 aaPredicted RBP8.61□□□□□ -1.03
COMMD3-212ENST00000479958 C9orf131Q5VYM1 1079 aa8.61□□□□□ -1.03
COMMD3-212ENST00000479958 CCDC144CPQ8IYA2 1237 aa8.61□□□□□ -1.03
COMMD3-212ENST00000479958 ANKS4BQ8N8V4 417 aa8.61□□□□□ -1.03
COMMD3-212ENST00000479958 SMARCC1Q92922 1105 aaPredicted RBP8.61□□□□□ -1.03
COMMD3-212ENST00000479958 GPRASP2Q96D09 838 aa8.61□□□□□ -1.03
COMMD3-212ENST00000479958 CHST7Q9NS84 486 aa8.61□□□□□ -1.03
COMMD3-212ENST00000479958 KIAA1522Q9P206 1035 aaPredicted RBP8.61□□□□□ -1.03
COMMD3-212ENST00000479958 TCFL5Q9UL49 500 aa8.61□□□□□ -1.03
COMMD3-212ENST00000479958 EFR3BQ9Y2G0 817 aa8.61□□□□□ -1.03
COMMD3-212ENST00000479958 SMARCA4P51532 1647 aa8.61□□□□□ -1.03
COMMD3-212ENST00000479958 BAZ1AQ9NRL2 1556 aaPredicted RBP8.6□□□□□ -1.03
COMMD3-212ENST00000479958 PRAMEF1O95521 474 aa8.6□□□□□ -1.03
COMMD3-212ENST00000479958 ENDOUP21128 410 aaKnown RBP8.6□□□□□ -1.03
COMMD3-212ENST00000479958 GUCY2CP25092 1073 aa8.6□□□□□ -1.03
COMMD3-212ENST00000479958 SNX17Q15036 470 aa8.6□□□□□ -1.03
COMMD3-212ENST00000479958 BBS9Q3SYG4 887 aa8.6□□□□□ -1.03
COMMD3-212ENST00000479958 GINM1Q9NU53 330 aa8.6□□□□□ -1.03
COMMD3-212ENST00000479958 PRR13Q9NZ81 148 aa8.6□□□□□ -1.03
COMMD3-212ENST00000479958 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.6□□□□□ -1.03
COMMD3-212ENST00000479958 FAM86C2PA6NEL3 165 aa8.59□□□□□ -1.03
COMMD3-212ENST00000479958 SYPP08247 313 aa8.59□□□□□ -1.03
COMMD3-212ENST00000479958 PMS1P54277 932 aaKnown RBP8.59□□□□□ -1.03
COMMD3-212ENST00000479958 EIF6P56537 245 aaKnown RBP8.59□□□□□ -1.03
COMMD3-212ENST00000479958 SNW1Q13573 536 aaKnown RBP8.59□□□□□ -1.03
COMMD3-212ENST00000479958 WAPLQ7Z5K2 1190 aa8.59□□□□□ -1.03
COMMD3-212ENST00000479958 C7orf61Q8IZ16 206 aa8.59□□□□□ -1.03
COMMD3-212ENST00000479958 KRTAP9-9Q9BYP9 154 aa8.59□□□□□ -1.03
COMMD3-212ENST00000479958 KRTAP9-4Q9BYQ2 154 aa8.59□□□□□ -1.03
COMMD3-212ENST00000479958 FOXP3Q9BZS1 431 aa8.59□□□□□ -1.03
COMMD3-212ENST00000479958 SLC12A7Q9Y666 1083 aa8.59□□□□□ -1.03
COMMD3-212ENST00000479958 UNCXA6NJT0 531 aa8.58□□□□□ -1.04
COMMD3-212ENST00000479958 ACRP10323 421 aa8.58□□□□□ -1.04
COMMD3-212ENST00000479958 SOX9P48436 509 aa8.58□□□□□ -1.04
COMMD3-212ENST00000479958 SLC14A2Q15849 920 aa8.58□□□□□ -1.04
COMMD3-212ENST00000479958 PRR23BQ6ZRT6 265 aa8.58□□□□□ -1.04
COMMD3-212ENST00000479958 BHLHE22Q8NFJ8 381 aaPredicted RBP8.58□□□□□ -1.04
COMMD3-212ENST00000479958 RASGRP4Q8TDF6 673 aa8.58□□□□□ -1.04
COMMD3-212ENST00000479958 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.57□□□□□ -1.04
COMMD3-212ENST00000479958 ANKRD39Q53RE8 183 aa8.57□□□□□ -1.04
COMMD3-212ENST00000479958 NOL9Q5SY16 702 aaKnown RBP8.57□□□□□ -1.04
COMMD3-212ENST00000479958 UNC5AQ6ZN44 842 aa8.57□□□□□ -1.04
COMMD3-212ENST00000479958 OR6P1Q8NGX9 317 aa8.57□□□□□ -1.04
COMMD3-212ENST00000479958 CPLX3Q8WVH0 158 aa8.57□□□□□ -1.04
COMMD3-212ENST00000479958 LINC01599Q8WXQ3 324 aa8.57□□□□□ -1.04
COMMD3-212ENST00000479958 DSCC1Q9BVC3 393 aa8.57□□□□□ -1.04
COMMD3-212ENST00000479958 TGIF2Q9GZN2 237 aa8.57□□□□□ -1.04
COMMD3-212ENST00000479958 C19orf44Q9H6X5 657 aa8.57□□□□□ -1.04
COMMD3-212ENST00000479958 CWC22Q9HCG8 908 aaKnown RBP8.57□□□□□ -1.04
COMMD3-212ENST00000479958 GFOD1Q9NXC2 390 aa8.57□□□□□ -1.04
COMMD3-212ENST00000479958 ZNF281Q9Y2X9 895 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms