RNA–Protein interactions for RNA: ENST00000472103.5

SMARCD3-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-207ENST00000472103 POTEEQ6S8J3 1075 aa17.15■□□□□ 0.34
SMARCD3-207ENST00000472103 NFXL1Q6ZNB6 911 aa17.15■□□□□ 0.34
SMARCD3-207ENST00000472103 STAG2Q8N3U4 1231 aa17.15■□□□□ 0.34
SMARCD3-207ENST00000472103 GMCL1Q96IK5 515 aa17.15■□□□□ 0.34
SMARCD3-207ENST00000472103 CPVLQ9H3G5 476 aa17.15■□□□□ 0.34
SMARCD3-207ENST00000472103 KLF18A0A0U1RQI7 1052 aa17.14■□□□□ 0.33
SMARCD3-207ENST00000472103 CCDC69A6NI79 296 aa17.14■□□□□ 0.33
SMARCD3-207ENST00000472103 PEX10O60683 326 aa17.14■□□□□ 0.33
SMARCD3-207ENST00000472103 CYP2C8P10632 490 aa17.14■□□□□ 0.33
SMARCD3-207ENST00000472103 BMP3P12645 472 aa17.14■□□□□ 0.33
SMARCD3-207ENST00000472103 HOXA7P31268 230 aaPredicted RBP17.14■□□□□ 0.33
SMARCD3-207ENST00000472103 SLC1A4P43007 532 aa17.14■□□□□ 0.33
SMARCD3-207ENST00000472103 INHBEP58166 350 aa17.14■□□□□ 0.33
SMARCD3-207ENST00000472103 ZNF543Q08ER8 600 aa17.14■□□□□ 0.33
SMARCD3-207ENST00000472103 GRM4Q14833 912 aa17.14■□□□□ 0.33
SMARCD3-207ENST00000472103 CCDC96Q2M329 555 aa17.14■□□□□ 0.33
SMARCD3-207ENST00000472103 SLC35G1Q2M3R5 365 aa17.14■□□□□ 0.33
SMARCD3-207ENST00000472103 APOA5Q6Q788 366 aa17.14■□□□□ 0.33
SMARCD3-207ENST00000472103 NOL8Q76FK4 1167 aaKnown RBP17.14■□□□□ 0.33
SMARCD3-207ENST00000472103 CCDC144CPQ8IYA2 1237 aa17.14■□□□□ 0.33
SMARCD3-207ENST00000472103 NUP133Q8WUM0 1156 aa17.14■□□□□ 0.33
SMARCD3-207ENST00000472103 DCAF4Q8WV16 495 aa17.14■□□□□ 0.33
SMARCD3-207ENST00000472103 ASCC2Q9H1I8 757 aaPredicted RBP17.14■□□□□ 0.33
SMARCD3-207ENST00000472103 ALDH8A1Q9H2A2 487 aaPredicted RBP17.14■□□□□ 0.33
SMARCD3-207ENST00000472103 R3HDMLQ9H3Y0 253 aa17.14■□□□□ 0.33
SMARCD3-207ENST00000472103 GPCPD1Q9NPB8 672 aa17.14■□□□□ 0.33
SMARCD3-207ENST00000472103 USP17L15C9J2P7 530 aa17.13■□□□□ 0.33
SMARCD3-207ENST00000472103 USP17L13C9JLJ4 530 aa17.13■□□□□ 0.33
SMARCD3-207ENST00000472103 USP17L11C9JVI0 530 aa17.13■□□□□ 0.33
SMARCD3-207ENST00000472103 USP17L18D6R9N7 530 aa17.13■□□□□ 0.33
SMARCD3-207ENST00000472103 USP17L22D6RA61 530 aa17.13■□□□□ 0.33
SMARCD3-207ENST00000472103 USP17L17D6RBQ6 530 aa17.13■□□□□ 0.33
SMARCD3-207ENST00000472103 USP17L19D6RCP7 530 aa17.13■□□□□ 0.33
SMARCD3-207ENST00000472103 USP17L20D6RJB6 530 aa17.13■□□□□ 0.33
SMARCD3-207ENST00000472103 CD2BP2O95400 341 aaKnown RBP17.13■□□□□ 0.33
SMARCD3-207ENST00000472103 LARGE1O95461 756 aa17.13■□□□□ 0.33
SMARCD3-207ENST00000472103 FGD1P98174 961 aa17.13■□□□□ 0.33
SMARCD3-207ENST00000472103 USP17L24Q0WX57 530 aa17.13■□□□□ 0.33
SMARCD3-207ENST00000472103 RABEP1Q15276 862 aa17.13■□□□□ 0.33
SMARCD3-207ENST00000472103 TMTC2Q8N394 836 aa17.13■□□□□ 0.33
SMARCD3-207ENST00000472103 P2RX7Q99572 595 aaKnown RBP17.13■□□□□ 0.33
SMARCD3-207ENST00000472103 TANGO6Q9C0B7 1094 aa17.13■□□□□ 0.33
SMARCD3-207ENST00000472103 MAD2L2Q9UI95 211 aa17.13■□□□□ 0.33
SMARCD3-207ENST00000472103 HPS5Q9UPZ3 1129 aa17.13■□□□□ 0.33
SMARCD3-207ENST00000472103 SLC12A7Q9Y666 1083 aa17.13■□□□□ 0.33
SMARCD3-207ENST00000472103 TMEM232C9JQI7 657 aa17.12■□□□□ 0.33
SMARCD3-207ENST00000472103 DDAH1O94760 285 aa17.12■□□□□ 0.33
SMARCD3-207ENST00000472103 SLC16A2P36021 539 aa17.12■□□□□ 0.33
SMARCD3-207ENST00000472103 EVCP57679 992 aa17.12■□□□□ 0.33
SMARCD3-207ENST00000472103 SAMD1Q6SPF0 538 aaPredicted RBP17.12■□□□□ 0.33
SMARCD3-207ENST00000472103 CATIPQ7Z7H3 387 aa17.12■□□□□ 0.33
SMARCD3-207ENST00000472103 NBPF11Q86T75 865 aa17.12■□□□□ 0.33
SMARCD3-207ENST00000472103 MICU3Q86XE3 530 aa17.12■□□□□ 0.33
SMARCD3-207ENST00000472103 UBA5Q9GZZ9 404 aa17.12■□□□□ 0.33
SMARCD3-207ENST00000472103 FAM217BQ9NTX9 383 aaPredicted RBP17.12■□□□□ 0.33
SMARCD3-207ENST00000472103 RNF186Q9NXI6 227 aa17.12■□□□□ 0.33
SMARCD3-207ENST00000472103 TPCN1Q9ULQ1 816 aa17.12■□□□□ 0.33
SMARCD3-207ENST00000472103 ISY1Q9ULR0 285 aaKnown RBP17.12■□□□□ 0.33
SMARCD3-207ENST00000472103 SLC45A1Q9Y2W3 748 aa17.12■□□□□ 0.33
SMARCD3-207ENST00000472103 ADGRA2Q96PE1 1338 aa17.12■□□□□ 0.33
SMARCD3-207ENST00000472103 PALM3A6NDB9 673 aaPredicted RBP17.11■□□□□ 0.33
SMARCD3-207ENST00000472103 SPDYE16A6NNV3 312 aaPredicted RBP17.11■□□□□ 0.33
SMARCD3-207ENST00000472103 OSBPP22059 807 aa17.11■□□□□ 0.33
SMARCD3-207ENST00000472103 CDC27P30260 824 aa17.11■□□□□ 0.33
SMARCD3-207ENST00000472103 DSG3P32926 999 aa17.11■□□□□ 0.33
SMARCD3-207ENST00000472103 SNAP25P60880 206 aa17.11■□□□□ 0.33
SMARCD3-207ENST00000472103 TAF1CQ15572 869 aaPredicted RBP17.11■□□□□ 0.33
SMARCD3-207ENST00000472103 ATG4CQ96DT6 458 aa17.11■□□□□ 0.33
SMARCD3-207ENST00000472103 NAP1L2Q9ULW6 460 aaPredicted RBP17.11■□□□□ 0.33
SMARCD3-207ENST00000472103 COL11A1P12107 1806 aaPredicted RBP17.11■□□□□ 0.33
SMARCD3-207ENST00000472103 A0A0G2JMZ2 1700 aa17.1■□□□□ 0.33
SMARCD3-207ENST00000472103 GOLGA8AA7E2F4 631 aa17.1■□□□□ 0.33
SMARCD3-207ENST00000472103 GOLGA8BA8MQT2 603 aa17.1■□□□□ 0.33
SMARCD3-207ENST00000472103 ZBTB43O43298 467 aa17.1■□□□□ 0.33
SMARCD3-207ENST00000472103 CNMDO75829 334 aa17.1■□□□□ 0.33
SMARCD3-207ENST00000472103 FLOT1O75955 427 aa17.1■□□□□ 0.33
SMARCD3-207ENST00000472103 PLEKHA8P1O95397 391 aa17.1■□□□□ 0.33
SMARCD3-207ENST00000472103 PARP1P09874 1014 aaKnown RBP17.1■□□□□ 0.33
SMARCD3-207ENST00000472103 PDIA3P30101 505 aaKnown RBP17.1■□□□□ 0.33
SMARCD3-207ENST00000472103 IRX3P78415 501 aaPredicted RBP17.1■□□□□ 0.33
SMARCD3-207ENST00000472103 CRHR2Q13324 411 aa17.1■□□□□ 0.33
SMARCD3-207ENST00000472103 BTNL9Q6UXG8 535 aa17.1■□□□□ 0.33
SMARCD3-207ENST00000472103 REM2Q8IYK8 340 aaPredicted RBP17.1■□□□□ 0.33
SMARCD3-207ENST00000472103 ZCCHC17Q9NP64 241 aaKnown RBP17.1■□□□□ 0.33
SMARCD3-207ENST00000472103 PPP1R9AQ9ULJ8 1098 aa17.1■□□□□ 0.33
SMARCD3-207ENST00000472103 DTNBO60941 627 aa17.09■□□□□ 0.33
SMARCD3-207ENST00000472103 TRPA1O75762 1119 aa17.09■□□□□ 0.33
SMARCD3-207ENST00000472103 TBC1D8O95759 1140 aa17.09■□□□□ 0.33
SMARCD3-207ENST00000472103 HERVK_113P62684 666 aa17.09■□□□□ 0.33
SMARCD3-207ENST00000472103 CCT2P78371 535 aaKnown RBP17.09■□□□□ 0.33
SMARCD3-207ENST00000472103 ST3GAL1Q11201 340 aa17.09■□□□□ 0.33
SMARCD3-207ENST00000472103 STK3Q13188 491 aa17.09■□□□□ 0.33
SMARCD3-207ENST00000472103 PABPC4Q13310 644 aaKnown RBP eCLIP17.09■□□□□ 0.33
SMARCD3-207ENST00000472103 COG2Q14746 738 aa17.09■□□□□ 0.33
SMARCD3-207ENST00000472103 ASPRV1Q53RT3 343 aa17.09■□□□□ 0.33
SMARCD3-207ENST00000472103 CMTR1Q8N1G2 835 aaKnown RBP17.09■□□□□ 0.33
SMARCD3-207ENST00000472103 JMYQ8N9B5 988 aa17.09■□□□□ 0.33
SMARCD3-207ENST00000472103 FANCBQ8NB91 859 aa17.09■□□□□ 0.33
SMARCD3-207ENST00000472103 KIFC2Q96AC6 838 aa17.09■□□□□ 0.33
SMARCD3-207ENST00000472103 SLF1Q9BQI6 1058 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms