RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 SLC44A5Q8NCS7 719 aa20.27■□□□□ 0.83
HSPG2-208ENST00000471322 FBXO18Q8NFZ0 1043 aa20.27■□□□□ 0.83
HSPG2-208ENST00000471322 GPT2Q8TD30 523 aa20.27■□□□□ 0.83
HSPG2-208ENST00000471322 FAM217BQ9NTX9 383 aaPredicted RBP20.27■□□□□ 0.83
HSPG2-208ENST00000471322 DDX60LQ5H9U9 1706 aaKnown RBP20.26■□□□□ 0.83
HSPG2-208ENST00000471322 TSPY2A6NKD2 308 aa20.26■□□□□ 0.83
HSPG2-208ENST00000471322 SSRP1Q08945 709 aaKnown RBP20.26■□□□□ 0.83
HSPG2-208ENST00000471322 METTL16Q86W50 562 aaKnown RBP20.26■□□□□ 0.83
HSPG2-208ENST00000471322 ZNF444Q8N0Y2 327 aaPredicted RBP20.26■□□□□ 0.83
HSPG2-208ENST00000471322 SYAP1Q96A49 352 aaPredicted RBP20.26■□□□□ 0.83
HSPG2-208ENST00000471322 ZHX2Q9Y6X8 837 aa20.26■□□□□ 0.83
HSPG2-208ENST00000471322 ELP1O95163 1332 aa20.26■□□□□ 0.83
HSPG2-208ENST00000471322 THSD7BQ9C0I4 1608 aa20.25■□□□□ 0.83
HSPG2-208ENST00000471322 FIBPO43427 364 aa20.25■□□□□ 0.83
HSPG2-208ENST00000471322 DDAH1O94760 285 aa20.25■□□□□ 0.83
HSPG2-208ENST00000471322 PTPRAP18433 802 aa20.25■□□□□ 0.83
HSPG2-208ENST00000471322 RXRAP19793 462 aa20.25■□□□□ 0.83
HSPG2-208ENST00000471322 CAP2P40123 477 aa20.25■□□□□ 0.83
HSPG2-208ENST00000471322 NOL9Q5SY16 702 aaKnown RBP20.25■□□□□ 0.83
HSPG2-208ENST00000471322 TRIM22Q8IYM9 498 aa20.25■□□□□ 0.83
HSPG2-208ENST00000471322 BEGAINQ9BUH8 593 aa20.25■□□□□ 0.83
HSPG2-208ENST00000471322 GDPD2Q9HCC8 539 aa20.25■□□□□ 0.83
HSPG2-208ENST00000471322 TCP11L1Q9NUJ3 509 aa20.25■□□□□ 0.83
HSPG2-208ENST00000471322 RBM28Q9NW13 759 aaKnown RBP20.25■□□□□ 0.83
HSPG2-208ENST00000471322 FMNL1O95466 1100 aaPredicted RBP20.24■□□□□ 0.83
HSPG2-208ENST00000471322 DGKHQ86XP1 1220 aa20.24■□□□□ 0.83
HSPG2-208ENST00000471322 ANKS1AQ92625 1134 aa20.24■□□□□ 0.83
HSPG2-208ENST00000471322 ZNF396Q96N95 335 aaPredicted RBP20.24■□□□□ 0.83
HSPG2-208ENST00000471322 MYL10Q9BUA6 226 aa20.24■□□□□ 0.83
HSPG2-208ENST00000471322 FOXN1O15353 648 aa20.24■□□□□ 0.83
HSPG2-208ENST00000471322 TRPA1O75762 1119 aa20.24■□□□□ 0.83
HSPG2-208ENST00000471322 SHMT1P34896 483 aa20.24■□□□□ 0.83
HSPG2-208ENST00000471322 TFAP4Q01664 338 aa20.24■□□□□ 0.83
HSPG2-208ENST00000471322 CAVIN1Q6NZI2 390 aaKnown RBP20.24■□□□□ 0.83
HSPG2-208ENST00000471322 CCDC144CPQ8IYA2 1237 aa20.24■□□□□ 0.83
HSPG2-208ENST00000471322 NUP133Q8WUM0 1156 aa20.24■□□□□ 0.83
HSPG2-208ENST00000471322 MS4A4AQ96JQ5 239 aa20.24■□□□□ 0.83
HSPG2-208ENST00000471322 ALG1Q9BT22 464 aa20.24■□□□□ 0.83
HSPG2-208ENST00000471322 EHD4Q9H223 541 aa20.24■□□□□ 0.83
HSPG2-208ENST00000471322 TRIM75PA6NK02 468 aa20.23■□□□□ 0.83
HSPG2-208ENST00000471322 PPATQ06203 517 aa20.23■□□□□ 0.83
HSPG2-208ENST00000471322 GABPAQ06546 454 aa20.23■□□□□ 0.83
HSPG2-208ENST00000471322 PPIL2Q13356 520 aa20.23■□□□□ 0.83
HSPG2-208ENST00000471322 TRIM29Q14134 588 aa20.23■□□□□ 0.83
HSPG2-208ENST00000471322 C16orf86Q6ZW13 317 aa20.23■□□□□ 0.83
HSPG2-208ENST00000471322 CCL15-CCL14A0A0B4J2E2 113 aa20.22■□□□□ 0.83
HSPG2-208ENST00000471322 GOLGA6L3A6NEY3 463 aa20.22■□□□□ 0.83
HSPG2-208ENST00000471322 MANSC4A6NHS7 340 aaPredicted RBP20.22■□□□□ 0.83
HSPG2-208ENST00000471322 GH2P01242 217 aa20.22■□□□□ 0.83
HSPG2-208ENST00000471322 SREBF2Q12772 1141 aa20.22■□□□□ 0.83
HSPG2-208ENST00000471322 CCL15Q16663 113 aa20.22■□□□□ 0.83
HSPG2-208ENST00000471322 FAM47AQ5JRC9 791 aa20.22■□□□□ 0.83
HSPG2-208ENST00000471322 L1TD1Q5T7N2 865 aaKnown RBP20.22■□□□□ 0.83
HSPG2-208ENST00000471322 BRAPQ7Z569 592 aa20.22■□□□□ 0.83
HSPG2-208ENST00000471322 BRI3BPQ8WY22 251 aa20.22■□□□□ 0.83
HSPG2-208ENST00000471322 PTPN18Q99952 460 aa20.22■□□□□ 0.83
HSPG2-208ENST00000471322 SLC26A6Q9BXS9 759 aa20.22■□□□□ 0.83
HSPG2-208ENST00000471322 IGF2BP3O00425 579 aaKnown RBP eCLIP20.21■□□□□ 0.83
HSPG2-208ENST00000471322 PPFIA3O75145 1194 aa20.21■□□□□ 0.83
HSPG2-208ENST00000471322 GADD45BO75293 160 aaPredicted RBP20.21■□□□□ 0.83
HSPG2-208ENST00000471322 TSPY3P0CV98 308 aa20.21■□□□□ 0.83
HSPG2-208ENST00000471322 TSPY8P0CW00 308 aa20.21■□□□□ 0.83
HSPG2-208ENST00000471322 FOSBP53539 338 aa20.21■□□□□ 0.83
HSPG2-208ENST00000471322 CERKLQ49MI3 558 aaPredicted RBP20.21■□□□□ 0.83
HSPG2-208ENST00000471322 TATDN1Q6P1N9 297 aa20.21■□□□□ 0.83
HSPG2-208ENST00000471322 PHKBQ93100 1093 aa20.21■□□□□ 0.83
HSPG2-208ENST00000471322 SPATA32Q96LK8 384 aa20.21■□□□□ 0.83
HSPG2-208ENST00000471322 RNF186Q9NXI6 227 aa20.21■□□□□ 0.83
HSPG2-208ENST00000471322 LAMB1P07942 1786 aa20.21■□□□□ 0.83
HSPG2-208ENST00000471322 DOCK1Q14185 1865 aa20.21■□□□□ 0.83
HSPG2-208ENST00000471322 MPHOSPH10O00566 681 aaKnown RBP20.2■□□□□ 0.82
HSPG2-208ENST00000471322 DEXIO95424 95 aa20.2■□□□□ 0.82
HSPG2-208ENST00000471322 TM4SF4P48230 202 aa20.2■□□□□ 0.82
HSPG2-208ENST00000471322 CDK8P49336 464 aa20.2■□□□□ 0.82
HSPG2-208ENST00000471322 GTF2A2P52657 109 aa20.2■□□□□ 0.82
HSPG2-208ENST00000471322 TROAPQ12815 778 aa20.2■□□□□ 0.82
HSPG2-208ENST00000471322 SNAPC2Q13487 334 aa20.2■□□□□ 0.82
HSPG2-208ENST00000471322 MAP3K14Q99558 947 aa20.2■□□□□ 0.82
HSPG2-208ENST00000471322 TAOK2Q9UL54 1235 aa20.2■□□□□ 0.82
HSPG2-208ENST00000471322 ZBTB21Q9ULJ3 1066 aa20.2■□□□□ 0.82
HSPG2-208ENST00000471322 ZNF445P59923 1031 aa20.2■□□□□ 0.82
HSPG2-208ENST00000471322 AKAP17AQ02040 695 aaKnown RBP20.2■□□□□ 0.82
HSPG2-208ENST00000471322 GUCY1B3Q02153 619 aa20.2■□□□□ 0.82
HSPG2-208ENST00000471322 DGKZQ13574 1117 aa20.2■□□□□ 0.82
HSPG2-208ENST00000471322 FAM173BQ6P4H8 233 aa20.2■□□□□ 0.82
HSPG2-208ENST00000471322 IFNL1Q8IU54 200 aa20.2■□□□□ 0.82
HSPG2-208ENST00000471322 LEO1Q8WVC0 666 aaPredicted RBP20.2■□□□□ 0.82
HSPG2-208ENST00000471322 RNF26Q9BY78 433 aaPredicted RBP20.2■□□□□ 0.82
HSPG2-208ENST00000471322 KAT14Q9H8E8 782 aa20.2■□□□□ 0.82
HSPG2-208ENST00000471322 AFG3L2Q9Y4W6 797 aa20.2■□□□□ 0.82
HSPG2-208ENST00000471322 FSD2A1L4K1 749 aa20.19■□□□□ 0.82
HSPG2-208ENST00000471322 TBC1D8O95759 1140 aa20.19■□□□□ 0.82
HSPG2-208ENST00000471322 ASNSP08243 561 aa20.19■□□□□ 0.82
HSPG2-208ENST00000471322 RASA1P20936 1047 aa20.19■□□□□ 0.82
HSPG2-208ENST00000471322 KIF5BP33176 963 aa20.19■□□□□ 0.82
HSPG2-208ENST00000471322 SPP2Q13103 211 aa20.19■□□□□ 0.82
HSPG2-208ENST00000471322 ABCB5Q2M3G0 1257 aa20.19■□□□□ 0.82
HSPG2-208ENST00000471322 ZSCAN23Q3MJ62 389 aa20.19■□□□□ 0.82
HSPG2-208ENST00000471322 NBPF11Q86T75 865 aa20.19■□□□□ 0.82
HSPG2-208ENST00000471322 CTCFLQ8NI51 663 aaPredicted RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms