RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 ETV3P41162 512 aa2.58□□□□□ -2
UBXN4-207ENST00000471246 GDF5P43026 501 aa2.58□□□□□ -2
UBXN4-207ENST00000471246 KIR3DL1P43629 444 aa2.58□□□□□ -2
UBXN4-207ENST00000471246 AFF3P51826 1226 aaKnown RBP2.58□□□□□ -2
UBXN4-207ENST00000471246 TNK2Q07912 1038 aa2.58□□□□□ -2
UBXN4-207ENST00000471246 MPP2Q14168 576 aa2.58□□□□□ -2
UBXN4-207ENST00000471246 ZNF827Q17R98 1081 aa2.58□□□□□ -2
UBXN4-207ENST00000471246 ZNF326Q5BKZ1 582 aaKnown RBP2.58□□□□□ -2
UBXN4-207ENST00000471246 TMEM201Q5SNT2 666 aa2.58□□□□□ -2
UBXN4-207ENST00000471246 REC114Q7Z4M0 266 aa2.58□□□□□ -2
UBXN4-207ENST00000471246 CDH24Q86UP0 819 aa2.58□□□□□ -2
UBXN4-207ENST00000471246 RELL1Q8IUW5 271 aa2.58□□□□□ -2
UBXN4-207ENST00000471246 MCATQ8IVS2 390 aaKnown RBP2.58□□□□□ -2
UBXN4-207ENST00000471246 GOLM1Q8NBJ4 401 aa2.58□□□□□ -2
UBXN4-207ENST00000471246 FAM13CQ8NE31 585 aa2.58□□□□□ -2
UBXN4-207ENST00000471246 FBXO27Q8NI29 283 aa2.58□□□□□ -2
UBXN4-207ENST00000471246 COX4I2Q96KJ9 171 aa2.58□□□□□ -2
UBXN4-207ENST00000471246 HSPA12BQ96MM6 686 aa2.58□□□□□ -2
UBXN4-207ENST00000471246 ATP13A1Q9HD20 1204 aa2.58□□□□□ -2
UBXN4-207ENST00000471246 COPRSQ9NQ92 184 aa2.58□□□□□ -2
UBXN4-207ENST00000471246 REV1Q9UBZ9 1251 aa2.58□□□□□ -2
UBXN4-207ENST00000471246 KLHL3Q9UH77 587 aa2.58□□□□□ -2
UBXN4-207ENST00000471246 ST14Q9Y5Y6 855 aa2.58□□□□□ -2
UBXN4-207ENST00000471246 TEX51A0A1B0GUA7 166 aa2.57□□□□□ -2
UBXN4-207ENST00000471246 UPK3BL1B0FP48 263 aa2.57□□□□□ -2
UBXN4-207ENST00000471246 UPK3BL2E5RIL1 263 aa2.57□□□□□ -2
UBXN4-207ENST00000471246 CYR61O00622 381 aa2.57□□□□□ -2
UBXN4-207ENST00000471246 TLR3O15455 904 aaKnown RBP2.57□□□□□ -2
UBXN4-207ENST00000471246 PEX10O60683 326 aa2.57□□□□□ -2
UBXN4-207ENST00000471246 DNAJA2O60884 412 aa2.57□□□□□ -2
UBXN4-207ENST00000471246 HTR3BO95264 441 aa2.57□□□□□ -2
UBXN4-207ENST00000471246 ZNF16P17020 682 aaPredicted RBP2.57□□□□□ -2
UBXN4-207ENST00000471246 YARSP54577 528 aaKnown RBP2.57□□□□□ -2
UBXN4-207ENST00000471246 MFAP1P55081 439 aaKnown RBP2.57□□□□□ -2
UBXN4-207ENST00000471246 FAM196AQ6ZSG2 479 aa2.57□□□□□ -2
UBXN4-207ENST00000471246 HS2ST1Q7LGA3 356 aa2.57□□□□□ -2
UBXN4-207ENST00000471246 THAP5Q7Z6K1 395 aa2.57□□□□□ -2
UBXN4-207ENST00000471246 SP8Q8IXZ3 490 aa2.57□□□□□ -2
UBXN4-207ENST00000471246 SLFN12Q8IYM2 578 aa2.57□□□□□ -2
UBXN4-207ENST00000471246 PIWIL2Q8TC59 973 aaKnown RBP2.57□□□□□ -2
UBXN4-207ENST00000471246 PPP1R13LQ8WUF5 828 aa2.57□□□□□ -2
UBXN4-207ENST00000471246 Q96M66 194 aa2.57□□□□□ -2
UBXN4-207ENST00000471246 LRRC3Q9BY71 257 aa2.57□□□□□ -2
UBXN4-207ENST00000471246 BCL11AQ9H165 835 aa2.57□□□□□ -2
UBXN4-207ENST00000471246 KCNQ5Q9NR82 932 aa2.57□□□□□ -2
UBXN4-207ENST00000471246 GGT7Q9UJ14 662 aa2.57□□□□□ -2
UBXN4-207ENST00000471246 CNOT11Q9UKZ1 510 aaKnown RBP2.57□□□□□ -2
UBXN4-207ENST00000471246 SUPT16HQ9Y5B9 1047 aaKnown RBP2.57□□□□□ -2
UBXN4-207ENST00000471246 PRR36Q9H6K5 1346 aa2.57□□□□□ -2
UBXN4-207ENST00000471246 C1QTNF3-AMACRE9PGA6 284 aa2.56□□□□□ -2
UBXN4-207ENST00000471246 EIF4A3P38919 411 aaKnown RBP2.56□□□□□ -2
UBXN4-207ENST00000471246 CRKP46108 304 aa2.56□□□□□ -2
UBXN4-207ENST00000471246 TNNI2P48788 182 aa2.56□□□□□ -2
UBXN4-207ENST00000471246 CWF19L2Q2TBE0 894 aaKnown RBP2.56□□□□□ -2
UBXN4-207ENST00000471246 FBXL19Q6PCT2 694 aa2.56□□□□□ -2
UBXN4-207ENST00000471246 ZNF605Q86T29 641 aa2.56□□□□□ -2
UBXN4-207ENST00000471246 TTC6Q86TZ1 520 aa2.56□□□□□ -2
UBXN4-207ENST00000471246 ZNF575Q86XF7 245 aa2.56□□□□□ -2
UBXN4-207ENST00000471246 DTWD2Q8NBA8 298 aa2.56□□□□□ -2
UBXN4-207ENST00000471246 RNF141Q8WVD5 230 aa2.56□□□□□ -2
UBXN4-207ENST00000471246 UBE2FQ969M7 185 aa2.56□□□□□ -2
UBXN4-207ENST00000471246 RNF32Q9H0A6 362 aa2.56□□□□□ -2
UBXN4-207ENST00000471246 EPB41L4AQ9HCS5 686 aaPredicted RBP2.56□□□□□ -2
UBXN4-207ENST00000471246 BRMS1Q9HCU9 246 aa2.56□□□□□ -2
UBXN4-207ENST00000471246 ZSWIM5Q9P217 1185 aa2.56□□□□□ -2
UBXN4-207ENST00000471246 ADAMTS1Q9UHI8 967 aa2.56□□□□□ -2
UBXN4-207ENST00000471246 CEP131Q9UPN4 1083 aa2.56□□□□□ -2
UBXN4-207ENST00000471246 CHURC1-FNTBB4DL54 471 aa2.55□□□□□ -2
UBXN4-207ENST00000471246 GREM1O60565 184 aa2.55□□□□□ -2
UBXN4-207ENST00000471246 ESR1P03372 595 aa2.55□□□□□ -2
UBXN4-207ENST00000471246 RAC2P15153 192 aa2.55□□□□□ -2
UBXN4-207ENST00000471246 TACR2P21452 398 aa2.55□□□□□ -2
UBXN4-207ENST00000471246 TPP2P29144 1249 aaPredicted RBP2.55□□□□□ -2
UBXN4-207ENST00000471246 KRTAP10-7P60409 375 aaPredicted RBP2.55□□□□□ -2
UBXN4-207ENST00000471246 APOBRQ0VD83 1088 aa2.55□□□□□ -2
UBXN4-207ENST00000471246 LDLRAD1Q5T700 205 aa2.55□□□□□ -2
UBXN4-207ENST00000471246 OVOS1Q6IE37 1185 aa2.55□□□□□ -2
UBXN4-207ENST00000471246 TMEM132EQ6IEE7 984 aa2.55□□□□□ -2
UBXN4-207ENST00000471246 TMPRSS7Q7RTY8 843 aa2.55□□□□□ -2
UBXN4-207ENST00000471246 HOMEZQ8IX15 550 aa2.55□□□□□ -2
UBXN4-207ENST00000471246 PHACTR4Q8IZ21 702 aa2.55□□□□□ -2
UBXN4-207ENST00000471246 ZNF296Q8WUU4 475 aaPredicted RBP2.55□□□□□ -2
UBXN4-207ENST00000471246 MYLIPQ8WY64 445 aa2.55□□□□□ -2
UBXN4-207ENST00000471246 CCDC74BQ96LY2 380 aa2.55□□□□□ -2
UBXN4-207ENST00000471246 KREMEN1Q96MU8 473 aa2.55□□□□□ -2
UBXN4-207ENST00000471246 ALPK1Q96QP1 1244 aa2.55□□□□□ -2
UBXN4-207ENST00000471246 KIF2CQ99661 725 aa2.55□□□□□ -2
UBXN4-207ENST00000471246 ASPNQ9BXN1 380 aa2.55□□□□□ -2
UBXN4-207ENST00000471246 KRTAP3-1Q9BYR8 98 aa2.55□□□□□ -2
UBXN4-207ENST00000471246 TRIT1Q9H3H1 467 aaKnown RBP2.55□□□□□ -2
UBXN4-207ENST00000471246 LUC7LQ9NQ29 371 aaKnown RBP2.55□□□□□ -2
UBXN4-207ENST00000471246 UBP1Q9NZI7 540 aa2.55□□□□□ -2
UBXN4-207ENST00000471246 SLAMF8Q9P0V8 285 aa2.55□□□□□ -2
UBXN4-207ENST00000471246 PCDHB14Q9Y5E9 798 aa2.55□□□□□ -2
UBXN4-207ENST00000471246 ROBO2Q9HCK4 1378 aa2.54□□□□□ -2
UBXN4-207ENST00000471246 DNAJC25-GNG10A0A024R161 153 aa2.54□□□□□ -2
UBXN4-207ENST00000471246 WASH4PA8MWX3 477 aa2.54□□□□□ -2
UBXN4-207ENST00000471246 LRRN2O75325 713 aa2.54□□□□□ -2
UBXN4-207ENST00000471246 ATE1O95260 518 aa2.54□□□□□ -2
UBXN4-207ENST00000471246 RECKO95980 971 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms