RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 JAK2O60674 1132 aa11.17□□□□□ -0.62
NUP50-214ENST00000469163 MYL1P05976 194 aa11.17□□□□□ -0.62
NUP50-214ENST00000469163 SCNN1BP51168 640 aa11.17□□□□□ -0.62
NUP50-214ENST00000469163 SYNE3Q6ZMZ3 975 aa11.17□□□□□ -0.62
NUP50-214ENST00000469163 LRRC8AQ8IWT6 810 aa11.17□□□□□ -0.62
NUP50-214ENST00000469163 SCLT1Q96NL6 688 aa11.17□□□□□ -0.62
NUP50-214ENST00000469163 MAST3O60307 1309 aa11.17□□□□□ -0.62
NUP50-214ENST00000469163 USP17L12C9JPN9 530 aa11.17□□□□□ -0.62
NUP50-214ENST00000469163 USP17L21D6R901 530 aa11.17□□□□□ -0.62
NUP50-214ENST00000469163 KIAA0754O94854 1291 aa11.17□□□□□ -0.62
NUP50-214ENST00000469163 SSBP05455 408 aaKnown RBP eCLIP11.17□□□□□ -0.62
NUP50-214ENST00000469163 CYP2D6P10635 497 aa11.17□□□□□ -0.62
NUP50-214ENST00000469163 MAGEA10P43363 369 aaPredicted RBP11.17□□□□□ -0.62
NUP50-214ENST00000469163 MTX1Q13505 466 aa11.17□□□□□ -0.62
NUP50-214ENST00000469163 SLC15A2Q16348 729 aa11.17□□□□□ -0.62
NUP50-214ENST00000469163 LONRF2Q1L5Z9 754 aa11.17□□□□□ -0.62
NUP50-214ENST00000469163 FBXO41Q8TF61 875 aa11.17□□□□□ -0.62
NUP50-214ENST00000469163 FUT8Q9BYC5 575 aa11.17□□□□□ -0.62
NUP50-214ENST00000469163 TTF2Q9UNY4 1162 aaKnown RBP11.17□□□□□ -0.62
NUP50-214ENST00000469163 U3KPZ7 1027 aaPredicted RBP11.17□□□□□ -0.62
NUP50-214ENST00000469163 KLF18A0A0U1RQI7 1052 aa11.17□□□□□ -0.62
NUP50-214ENST00000469163 TSPY2A6NKD2 308 aa11.17□□□□□ -0.62
NUP50-214ENST00000469163 PSMA5P28066 241 aa11.17□□□□□ -0.62
NUP50-214ENST00000469163 ZNF75DP51815 510 aa11.17□□□□□ -0.62
NUP50-214ENST00000469163 CLIC6Q96NY7 704 aa11.17□□□□□ -0.62
NUP50-214ENST00000469163 ARPC5LQ9BPX5 153 aa11.17□□□□□ -0.62
NUP50-214ENST00000469163 PHACTR1Q9C0D0 580 aa11.17□□□□□ -0.62
NUP50-214ENST00000469163 MROH5Q6ZUA9 1318 aa11.17□□□□□ -0.62
NUP50-214ENST00000469163 ZSCAN9O15535 394 aaPredicted RBP11.16□□□□□ -0.62
NUP50-214ENST00000469163 UQCRFS1P1P0C7P4 283 aa11.16□□□□□ -0.62
NUP50-214ENST00000469163 CLEC4GQ6UXB4 293 aa11.16□□□□□ -0.62
NUP50-214ENST00000469163 SLC44A5Q8NCS7 719 aa11.16□□□□□ -0.62
NUP50-214ENST00000469163 DYNLL2Q96FJ2 89 aa11.16□□□□□ -0.62
NUP50-214ENST00000469163 FAM84BQ96KN1 310 aaPredicted RBP11.16□□□□□ -0.62
NUP50-214ENST00000469163 MMADHCQ9H3L0 296 aaPredicted RBP11.16□□□□□ -0.62
NUP50-214ENST00000469163 L2HGDHQ9H9P8 463 aa11.16□□□□□ -0.62
NUP50-214ENST00000469163 ZBED6P86452 979 aa11.16□□□□□ -0.62
NUP50-214ENST00000469163 PRAMEF18Q5VWM3 479 aa11.16□□□□□ -0.62
NUP50-214ENST00000469163 C16orf87Q6PH81 154 aa11.16□□□□□ -0.62
NUP50-214ENST00000469163 TMC6Q7Z403 805 aa11.16□□□□□ -0.62
NUP50-214ENST00000469163 CRACR2BQ8N4Y2 399 aaPredicted RBP11.16□□□□□ -0.62
NUP50-214ENST00000469163 LMBR1Q8WVP7 490 aa11.16□□□□□ -0.62
NUP50-214ENST00000469163 FAM204AQ9H8W3 233 aa11.16□□□□□ -0.62
NUP50-214ENST00000469163 ATP6V1G1O75348 118 aa11.15□□□□□ -0.62
NUP50-214ENST00000469163 RTN3O95197 1032 aaPredicted RBP11.15□□□□□ -0.62
NUP50-214ENST00000469163 GJB2P29033 226 aa11.15□□□□□ -0.62
NUP50-214ENST00000469163 TMEM67Q5HYA8 995 aa11.15□□□□□ -0.62
NUP50-214ENST00000469163 ZNF280DQ6N043 979 aa11.15□□□□□ -0.62
NUP50-214ENST00000469163 ARHGAP27Q6ZUM4 889 aa11.15□□□□□ -0.62
NUP50-214ENST00000469163 ZNF804AQ7Z570 1209 aa11.15□□□□□ -0.62
NUP50-214ENST00000469163 AMOTL1Q8IY63 956 aa11.15□□□□□ -0.62
NUP50-214ENST00000469163 PHKBQ93100 1093 aa11.15□□□□□ -0.62
NUP50-214ENST00000469163 RSRC1Q96IZ7 334 aaKnown RBP11.15□□□□□ -0.62
NUP50-214ENST00000469163 ZCWPW1Q9H0M4 648 aa11.15□□□□□ -0.62
NUP50-214ENST00000469163 CCDC69A6NI79 296 aa11.15□□□□□ -0.62
NUP50-214ENST00000469163 PRC1O43663 620 aa11.15□□□□□ -0.62
NUP50-214ENST00000469163 CAMK4Q16566 473 aa11.15□□□□□ -0.62
NUP50-214ENST00000469163 LRRC23Q53EV4 343 aaPredicted RBP11.15□□□□□ -0.62
NUP50-214ENST00000469163 MFSD6Q6ZSS7 791 aa11.15□□□□□ -0.62
NUP50-214ENST00000469163 LSG1Q9H089 658 aaKnown RBP11.15□□□□□ -0.62
NUP50-214ENST00000469163 STAP2Q9UGK3 403 aa11.15□□□□□ -0.62
NUP50-214ENST00000469163 COL16A1Q07092 1604 aaPredicted RBP11.15□□□□□ -0.62
NUP50-214ENST00000469163 USP17L8P0C7I0 530 aa11.15□□□□□ -0.62
NUP50-214ENST00000469163 AKAP17AQ02040 695 aaKnown RBP11.15□□□□□ -0.62
NUP50-214ENST00000469163 RASA3Q14644 834 aa11.15□□□□□ -0.62
NUP50-214ENST00000469163 GRIK5Q16478 980 aa11.15□□□□□ -0.62
NUP50-214ENST00000469163 ACBD5Q5T8D3 534 aaPredicted RBP11.15□□□□□ -0.62
NUP50-214ENST00000469163 CLEC10AQ8IUN9 316 aa11.15□□□□□ -0.62
NUP50-214ENST00000469163 TDRD7Q8NHU6 1098 aaKnown RBP11.15□□□□□ -0.62
NUP50-214ENST00000469163 CNPY2Q9Y2B0 182 aa11.15□□□□□ -0.62
NUP50-214ENST00000469163 PCDHAC2Q9Y5I4 1007 aa11.15□□□□□ -0.62
NUP50-214ENST00000469163 BAZ2BQ9UIF8 2168 aaKnown RBP11.15□□□□□ -0.63
NUP50-214ENST00000469163 CARMIL3Q8ND23 1372 aa11.15□□□□□ -0.63
NUP50-214ENST00000469163 NMT2O60551 498 aa11.14□□□□□ -0.63
NUP50-214ENST00000469163 BRD1O95696 1058 aa11.14□□□□□ -0.63
NUP50-214ENST00000469163 CSF1RP07333 972 aa11.14□□□□□ -0.63
NUP50-214ENST00000469163 CAPRIN2Q6IMN6 1127 aaKnown RBP11.14□□□□□ -0.63
NUP50-214ENST00000469163 CEP112Q8N8E3 955 aa11.14□□□□□ -0.63
NUP50-214ENST00000469163 CPVLQ9H3G5 476 aa11.14□□□□□ -0.63
NUP50-214ENST00000469163 AHDC1Q5TGY3 1603 aaPredicted RBP11.14□□□□□ -0.63
NUP50-214ENST00000469163 MECOMQ03112 1051 aa11.14□□□□□ -0.63
NUP50-214ENST00000469163 GRAPQ13588 217 aa11.14□□□□□ -0.63
NUP50-214ENST00000469163 RBM12BQ8IXT5 1001 aaKnown RBP11.14□□□□□ -0.63
NUP50-214ENST00000469163 GRAPLQ8TC17 118 aaPredicted RBP11.14□□□□□ -0.63
NUP50-214ENST00000469163 TCP10L2B9ZVM9 353 aa11.14□□□□□ -0.63
NUP50-214ENST00000469163 ZNF189O75820 626 aaPredicted RBP11.14□□□□□ -0.63
NUP50-214ENST00000469163 TRIM28Q13263 835 aaKnown RBP11.14□□□□□ -0.63
NUP50-214ENST00000469163 SLC30A9Q6PML9 568 aa11.14□□□□□ -0.63
NUP50-214ENST00000469163 APPBP2Q92624 585 aa11.14□□□□□ -0.63
NUP50-214ENST00000469163 EPAS1Q99814 870 aa11.14□□□□□ -0.63
NUP50-214ENST00000469163 PARD6BQ9BYG5 372 aa11.14□□□□□ -0.63
NUP50-214ENST00000469163 ZSWIM4Q9H7M6 989 aa11.14□□□□□ -0.63
NUP50-214ENST00000469163 LIMCH1Q9UPQ0 1083 aa11.14□□□□□ -0.63
NUP50-214ENST00000469163 DISP2A7MBM2 1401 aa11.14□□□□□ -0.63
NUP50-214ENST00000469163 SLIT2O94813 1529 aa11.13□□□□□ -0.63
NUP50-214ENST00000469163 EFCAB8A8MWE9 144 aa11.13□□□□□ -0.63
NUP50-214ENST00000469163 TTF1Q15361 905 aaPredicted RBP11.13□□□□□ -0.63
NUP50-214ENST00000469163 C17orf50Q8WW18 174 aa11.13□□□□□ -0.63
NUP50-214ENST00000469163 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.13□□□□□ -0.63
NUP50-214ENST00000469163 CKAP2LQ8IYA6 745 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms