RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 GUCY2CP25092 1073 aa6.15□□□□□ -1.42
VPS50-209ENST00000467326 NASPP49321 788 aaPredicted RBP6.15□□□□□ -1.42
VPS50-209ENST00000467326 ZNF648Q5T619 568 aaPredicted RBP6.15□□□□□ -1.42
VPS50-209ENST00000467326 ATG4DQ86TL0 474 aaPredicted RBP6.15□□□□□ -1.42
VPS50-209ENST00000467326 ALPK1Q96QP1 1244 aa6.15□□□□□ -1.42
VPS50-209ENST00000467326 SLAMF8Q9P0V8 285 aa6.15□□□□□ -1.42
VPS50-209ENST00000467326 EIF6P56537 245 aaKnown RBP6.14□□□□□ -1.43
VPS50-209ENST00000467326 EGR3Q06889 387 aa6.14□□□□□ -1.43
VPS50-209ENST00000467326 SNW1Q13573 536 aaKnown RBP6.14□□□□□ -1.43
VPS50-209ENST00000467326 NBPF9Q3BBW0 867 aa6.14□□□□□ -1.43
VPS50-209ENST00000467326 INTS3Q68E01 1043 aaKnown RBP6.14□□□□□ -1.43
VPS50-209ENST00000467326 TMC3Q7Z5M5 1100 aa6.14□□□□□ -1.43
VPS50-209ENST00000467326 CCDC120Q96HB5 630 aa6.14□□□□□ -1.43
VPS50-209ENST00000467326 DHRS1Q96LJ7 313 aa6.14□□□□□ -1.43
VPS50-209ENST00000467326 CRBNQ96SW2 442 aa6.14□□□□□ -1.43
VPS50-209ENST00000467326 SRRTQ9BXP5 876 aaKnown RBP6.14□□□□□ -1.43
VPS50-209ENST00000467326 SUCOQ9UBS9 1254 aaKnown RBP6.14□□□□□ -1.43
VPS50-209ENST00000467326 PCDHA11Q9Y5I1 949 aa6.14□□□□□ -1.43
VPS50-209ENST00000467326 ZYXQ15942 572 aaKnown RBP6.13□□□□□ -1.43
VPS50-209ENST00000467326 TDRD10Q5VZ19 366 aaKnown RBP6.13□□□□□ -1.43
VPS50-209ENST00000467326 SPOCD1Q6ZMY3 1216 aa6.13□□□□□ -1.43
VPS50-209ENST00000467326 RUFY4Q6ZNE9 571 aa6.13□□□□□ -1.43
VPS50-209ENST00000467326 BHLHE22Q8NFJ8 381 aaPredicted RBP6.13□□□□□ -1.43
VPS50-209ENST00000467326 OR6P1Q8NGX9 317 aa6.13□□□□□ -1.43
VPS50-209ENST00000467326 SYTL5Q8TDW5 730 aaPredicted RBP6.13□□□□□ -1.43
VPS50-209ENST00000467326 SEC16BQ96JE7 1060 aa6.13□□□□□ -1.43
VPS50-209ENST00000467326 HDAC8Q9BY41 377 aa6.13□□□□□ -1.43
VPS50-209ENST00000467326 CAPN10Q9HC96 672 aa6.13□□□□□ -1.43
VPS50-209ENST00000467326 STRIP2Q9ULQ0 834 aa6.13□□□□□ -1.43
VPS50-209ENST00000467326 CTNND2Q9UQB3 1225 aa6.13□□□□□ -1.43
VPS50-209ENST00000467326 PCDHB12Q9Y5F1 795 aa6.13□□□□□ -1.43
VPS50-209ENST00000467326 PMS1P54277 932 aaKnown RBP6.12□□□□□ -1.43
VPS50-209ENST00000467326 CCDC144CPQ8IYA2 1237 aa6.12□□□□□ -1.43
VPS50-209ENST00000467326 ENOX1Q8TC92 643 aaKnown RBP6.12□□□□□ -1.43
VPS50-209ENST00000467326 PRDM14Q9GZV8 571 aa6.12□□□□□ -1.43
VPS50-209ENST00000467326 C19orf73Q9NVV2 129 aa6.12□□□□□ -1.43
VPS50-209ENST00000467326 TMEM59LQ9UK28 342 aa6.12□□□□□ -1.43
VPS50-209ENST00000467326 DNAJC25-GNG10A0A024R161 153 aa6.11□□□□□ -1.43
VPS50-209ENST00000467326 C9IYK1 514 aa6.11□□□□□ -1.43
VPS50-209ENST00000467326 SIGLEC6O43699 453 aa6.11□□□□□ -1.43
VPS50-209ENST00000467326 PRAMEF1O95521 474 aa6.11□□□□□ -1.43
VPS50-209ENST00000467326 GDNFP39905 211 aa6.11□□□□□ -1.43
VPS50-209ENST00000467326 GIPRP48546 466 aa6.11□□□□□ -1.43
VPS50-209ENST00000467326 ZNF124Q15973 351 aa6.11□□□□□ -1.43
VPS50-209ENST00000467326 RALGPS1Q5JS13 557 aa6.11□□□□□ -1.43
VPS50-209ENST00000467326 UNC5AQ6ZN44 842 aa6.11□□□□□ -1.43
VPS50-209ENST00000467326 PPFIBP1Q86W92 1011 aa6.11□□□□□ -1.43
VPS50-209ENST00000467326 C19orf47Q8N9M1 422 aaKnown RBP6.11□□□□□ -1.43
VPS50-209ENST00000467326 DAGLBQ8NCG7 672 aa6.11□□□□□ -1.43
VPS50-209ENST00000467326 CPLX3Q8WVH0 158 aa6.11□□□□□ -1.43
VPS50-209ENST00000467326 SMARCC1Q92922 1105 aaPredicted RBP6.11□□□□□ -1.43
VPS50-209ENST00000467326 SHDQ96IW2 340 aa6.11□□□□□ -1.43
VPS50-209ENST00000467326 E9PSI1 815 aa6.1□□□□□ -1.43
VPS50-209ENST00000467326 RAC2P15153 192 aa6.1□□□□□ -1.43
VPS50-209ENST00000467326 HK2P52789 917 aa6.1□□□□□ -1.43
VPS50-209ENST00000467326 GNL2Q13823 731 aaKnown RBP6.1□□□□□ -1.43
VPS50-209ENST00000467326 AUHQ13825 339 aaKnown RBP6.1□□□□□ -1.43
VPS50-209ENST00000467326 ZSWIM9Q86XI8 627 aa6.1□□□□□ -1.43
VPS50-209ENST00000467326 ZNF655Q8N720 491 aaPredicted RBP6.1□□□□□ -1.43
VPS50-209ENST00000467326 FAM168AQ92567 244 aa6.1□□□□□ -1.43
VPS50-209ENST00000467326 SYTL4Q96C24 671 aaPredicted RBP6.1□□□□□ -1.43
VPS50-209ENST00000467326 TCTN2Q96GX1 697 aa6.1□□□□□ -1.43
VPS50-209ENST00000467326 CHST7Q9NS84 486 aa6.1□□□□□ -1.43
VPS50-209ENST00000467326 FAM86C1Q9NVL1 165 aa6.1□□□□□ -1.43
VPS50-209ENST00000467326 GFOD1Q9NXC2 390 aa6.1□□□□□ -1.43
VPS50-209ENST00000467326 FBXL21Q9UKT6 434 aa6.1□□□□□ -1.43
VPS50-209ENST00000467326 SLC12A7Q9Y666 1083 aa6.1□□□□□ -1.43
VPS50-209ENST00000467326 SHOXO15266 292 aa6.09□□□□□ -1.43
VPS50-209ENST00000467326 ATF4P18848 351 aaPredicted RBP6.09□□□□□ -1.43
VPS50-209ENST00000467326 AFMP43652 599 aa6.09□□□□□ -1.43
VPS50-209ENST00000467326 PCBP3P57721 371 aaKnown RBP6.09□□□□□ -1.43
VPS50-209ENST00000467326 TEKQ02763 1124 aa6.09□□□□□ -1.43
VPS50-209ENST00000467326 KCNMB1Q16558 191 aa6.09□□□□□ -1.43
VPS50-209ENST00000467326 BBS9Q3SYG4 887 aa6.09□□□□□ -1.43
VPS50-209ENST00000467326 RNF111Q6ZNA4 994 aa6.09□□□□□ -1.43
VPS50-209ENST00000467326 TTC6Q86TZ1 520 aa6.09□□□□□ -1.43
VPS50-209ENST00000467326 C7orf61Q8IZ16 206 aa6.09□□□□□ -1.43
VPS50-209ENST00000467326 TINF2Q9BSI4 451 aa6.09□□□□□ -1.43
VPS50-209ENST00000467326 FOXP3Q9BZS1 431 aa6.09□□□□□ -1.43
VPS50-209ENST00000467326 PHAXQ9H814 394 aaKnown RBP6.09□□□□□ -1.43
VPS50-209ENST00000467326 PRR13Q9NZ81 148 aa6.09□□□□□ -1.43
VPS50-209ENST00000467326 TCFL5Q9UL49 500 aa6.09□□□□□ -1.43
VPS50-209ENST00000467326 ZNF214Q9UL59 606 aaPredicted RBP6.09□□□□□ -1.43
VPS50-209ENST00000467326 KRTAP9-7A8MTY7 169 aa6.08□□□□□ -1.44
VPS50-209ENST00000467326 MEIS1O00470 390 aa6.08□□□□□ -1.44
VPS50-209ENST00000467326 ZGLP1P0C6A0 271 aa6.08□□□□□ -1.44
VPS50-209ENST00000467326 DCAF15Q66K64 600 aa6.08□□□□□ -1.44
VPS50-209ENST00000467326 ANAPC16Q96DE5 110 aa6.08□□□□□ -1.44
VPS50-209ENST00000467326 KIRREL1Q96J84 757 aa6.08□□□□□ -1.44
VPS50-209ENST00000467326 FAM84AQ96KN4 292 aa6.08□□□□□ -1.44
VPS50-209ENST00000467326 TOX2Q96NM4 488 aa6.08□□□□□ -1.44
VPS50-209ENST00000467326 DSCC1Q9BVC3 393 aa6.08□□□□□ -1.44
VPS50-209ENST00000467326 ADAMTS10Q9H324 1103 aa6.08□□□□□ -1.44
VPS50-209ENST00000467326 IGSF5Q9NSI5 407 aa6.08□□□□□ -1.44
VPS50-209ENST00000467326 MINPP1Q9UNW1 487 aa6.08□□□□□ -1.44
VPS50-209ENST00000467326 CARMIL2Q6F5E8 1435 aa6.08□□□□□ -1.44
VPS50-209ENST00000467326 LTBP3Q9NS15 1303 aa6.07□□□□□ -1.44
VPS50-209ENST00000467326 SSU72P8A0A1W2PR75 194 aa6.07□□□□□ -1.44
VPS50-209ENST00000467326 FKTNO75072 461 aa6.07□□□□□ -1.44
VPS50-209ENST00000467326 TP53P04637 393 aaPredicted RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms