RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 SHOXO15266 292 aa5.43□□□□□ -1.54
HMGXB4-205ENST00000464480 FSTP19883 344 aa5.43□□□□□ -1.54
HMGXB4-205ENST00000464480 RSPO4Q2I0M5 234 aaPredicted RBP5.43□□□□□ -1.54
HMGXB4-205ENST00000464480 NOL9Q5SY16 702 aaKnown RBP5.43□□□□□ -1.54
HMGXB4-205ENST00000464480 SPATC1Q76KD6 591 aa5.43□□□□□ -1.54
HMGXB4-205ENST00000464480 DTWD2Q8NBA8 298 aa5.43□□□□□ -1.54
HMGXB4-205ENST00000464480 SHKBP1Q8TBC3 707 aa5.43□□□□□ -1.54
HMGXB4-205ENST00000464480 SH3TC2Q8TF17 1288 aa5.43□□□□□ -1.54
HMGXB4-205ENST00000464480 THAP3Q8WTV1 239 aaPredicted RBP5.43□□□□□ -1.54
HMGXB4-205ENST00000464480 SGSM3Q96HU1 749 aa5.43□□□□□ -1.54
HMGXB4-205ENST00000464480 FGD4Q96M96 766 aa5.43□□□□□ -1.54
HMGXB4-205ENST00000464480 CWC22Q9HCG8 908 aaKnown RBP5.43□□□□□ -1.54
HMGXB4-205ENST00000464480 ZNF451Q9Y4E5 1061 aa5.43□□□□□ -1.54
HMGXB4-205ENST00000464480 A0A087WZG4 1122 aa5.42□□□□□ -1.54
HMGXB4-205ENST00000464480 FAM155AB1AL88 458 aaPredicted RBP5.42□□□□□ -1.54
HMGXB4-205ENST00000464480 WDR64B1ANS9 1081 aa5.42□□□□□ -1.54
HMGXB4-205ENST00000464480 NOP56O00567 594 aaKnown RBP5.42□□□□□ -1.54
HMGXB4-205ENST00000464480 ENPP3O14638 875 aa5.42□□□□□ -1.54
HMGXB4-205ENST00000464480 DYRK3O43781 588 aa5.42□□□□□ -1.54
HMGXB4-205ENST00000464480 CLSTN1O94985 981 aa5.42□□□□□ -1.54
HMGXB4-205ENST00000464480 C2orf27AQ580R0 203 aa5.42□□□□□ -1.54
HMGXB4-205ENST00000464480 NKAPLQ5M9Q1 402 aa5.42□□□□□ -1.54
HMGXB4-205ENST00000464480 POMZP3Q6PJE2 187 aa5.42□□□□□ -1.54
HMGXB4-205ENST00000464480 FAM214BQ7L5A3 538 aa5.42□□□□□ -1.54
HMGXB4-205ENST00000464480 SLC51AQ86UW1 340 aa5.42□□□□□ -1.54
HMGXB4-205ENST00000464480 FAM177A1Q8N128 213 aaPredicted RBP5.42□□□□□ -1.54
HMGXB4-205ENST00000464480 NLGN1Q8N2Q7 840 aa5.42□□□□□ -1.54
HMGXB4-205ENST00000464480 PIWIL2Q8TC59 973 aaKnown RBP5.42□□□□□ -1.54
HMGXB4-205ENST00000464480 RNPC3Q96LT9 517 aaKnown RBP5.42□□□□□ -1.54
HMGXB4-205ENST00000464480 Q96M66 194 aa5.42□□□□□ -1.54
HMGXB4-205ENST00000464480 HEXIM2Q96MH2 286 aaKnown RBP5.42□□□□□ -1.54
HMGXB4-205ENST00000464480 DSCC1Q9BVC3 393 aa5.42□□□□□ -1.54
HMGXB4-205ENST00000464480 SPATA9Q9BWV2 254 aa5.42□□□□□ -1.54
HMGXB4-205ENST00000464480 PRDM14Q9GZV8 571 aa5.42□□□□□ -1.54
HMGXB4-205ENST00000464480 MKNK2Q9HBH9 465 aa5.42□□□□□ -1.54
HMGXB4-205ENST00000464480 SUSD2Q9UGT4 822 aa5.42□□□□□ -1.54
HMGXB4-205ENST00000464480 FHOD1Q9Y613 1164 aa5.42□□□□□ -1.54
HMGXB4-205ENST00000464480 CAPN6Q9Y6Q1 641 aa5.42□□□□□ -1.54
HMGXB4-205ENST00000464480 SIGLEC6O43699 453 aa5.41□□□□□ -1.54
HMGXB4-205ENST00000464480 DIAPH1O60610 1272 aaKnown RBP5.41□□□□□ -1.54
HMGXB4-205ENST00000464480 LRRN2O75325 713 aa5.41□□□□□ -1.54
HMGXB4-205ENST00000464480 CEACAM5P06731 702 aa5.41□□□□□ -1.54
HMGXB4-205ENST00000464480 ITIH2P19823 946 aa5.41□□□□□ -1.54
HMGXB4-205ENST00000464480 NMIQ13287 307 aaPredicted RBP5.41□□□□□ -1.54
HMGXB4-205ENST00000464480 CLEC16AQ2KHT3 1053 aa5.41□□□□□ -1.54
HMGXB4-205ENST00000464480 ZC3H12BQ5HYM0 836 aaKnown RBP5.41□□□□□ -1.54
HMGXB4-205ENST00000464480 SHISA5Q8N114 240 aa5.41□□□□□ -1.54
HMGXB4-205ENST00000464480 LILRB2Q8N423 598 aa5.41□□□□□ -1.54
HMGXB4-205ENST00000464480 LRRN4CLQ8ND94 238 aa5.41□□□□□ -1.54
HMGXB4-205ENST00000464480 BVESQ8NE79 360 aa5.41□□□□□ -1.54
HMGXB4-205ENST00000464480 ADCY4Q8NFM4 1077 aa5.41□□□□□ -1.54
HMGXB4-205ENST00000464480 SYTL5Q8TDW5 730 aaPredicted RBP5.41□□□□□ -1.54
HMGXB4-205ENST00000464480 APPBP2Q92624 585 aa5.41□□□□□ -1.54
HMGXB4-205ENST00000464480 RCC1LQ96I51 464 aaKnown RBP5.41□□□□□ -1.54
HMGXB4-205ENST00000464480 TRIT1Q9H3H1 467 aaKnown RBP5.41□□□□□ -1.54
HMGXB4-205ENST00000464480 GFOD1Q9NXC2 390 aa5.41□□□□□ -1.54
HMGXB4-205ENST00000464480 APEX2Q9UBZ4 518 aa5.41□□□□□ -1.54
HMGXB4-205ENST00000464480 PRR33A8MZF0 331 aa5.4□□□□□ -1.54
HMGXB4-205ENST00000464480 CDC45O75419 566 aa5.4□□□□□ -1.54
HMGXB4-205ENST00000464480 OXCT1P55809 520 aa5.4□□□□□ -1.54
HMGXB4-205ENST00000464480 ZNF445P59923 1031 aa5.4□□□□□ -1.54
HMGXB4-205ENST00000464480 TNK2Q07912 1038 aa5.4□□□□□ -1.54
HMGXB4-205ENST00000464480 SNW1Q13573 536 aaKnown RBP5.4□□□□□ -1.54
HMGXB4-205ENST00000464480 HSP90AA2PQ14568 343 aaPredicted RBP5.4□□□□□ -1.54
HMGXB4-205ENST00000464480 LONRF2Q1L5Z9 754 aa5.4□□□□□ -1.54
HMGXB4-205ENST00000464480 TMEM67Q5HYA8 995 aa5.4□□□□□ -1.54
HMGXB4-205ENST00000464480 TMC3Q7Z5M5 1100 aa5.4□□□□□ -1.54
HMGXB4-205ENST00000464480 ZNF227Q86WZ6 799 aa5.4□□□□□ -1.54
HMGXB4-205ENST00000464480 HOMER1Q86YM7 354 aa5.4□□□□□ -1.54
HMGXB4-205ENST00000464480 JMYQ8N9B5 988 aa5.4□□□□□ -1.54
HMGXB4-205ENST00000464480 ZSWIM2Q8NEG5 633 aa5.4□□□□□ -1.54
HMGXB4-205ENST00000464480 ENOX1Q8TC92 643 aaKnown RBP5.4□□□□□ -1.54
HMGXB4-205ENST00000464480 BRF1Q92994 677 aa5.4□□□□□ -1.54
HMGXB4-205ENST00000464480 AARSD1Q9BTE6 412 aaKnown RBP5.4□□□□□ -1.54
HMGXB4-205ENST00000464480 NOL6Q9H6R4 1146 aaKnown RBP5.4□□□□□ -1.54
HMGXB4-205ENST00000464480 CHST7Q9NS84 486 aa5.4□□□□□ -1.54
HMGXB4-205ENST00000464480 GPATCH2Q9NW75 528 aa5.4□□□□□ -1.54
HMGXB4-205ENST00000464480 TMEM260Q9NX78 707 aa5.4□□□□□ -1.54
HMGXB4-205ENST00000464480 CGGBP1Q9UFW8 167 aaPredicted RBP5.4□□□□□ -1.54
HMGXB4-205ENST00000464480 AKT3Q9Y243 479 aa5.4□□□□□ -1.54
HMGXB4-205ENST00000464480 DIS3Q9Y2L1 958 aaKnown RBP5.4□□□□□ -1.54
HMGXB4-205ENST00000464480 LEMD3Q9Y2U8 911 aa5.4□□□□□ -1.54
HMGXB4-205ENST00000464480 SF3B6Q9Y3B4 125 aaKnown RBP5.4□□□□□ -1.54
HMGXB4-205ENST00000464480 PTCH2Q9Y6C5 1203 aa5.4□□□□□ -1.54
HMGXB4-205ENST00000464480 CNTNAP4Q9C0A0 1308 aa5.4□□□□□ -1.55
HMGXB4-205ENST00000464480 CADPSQ9ULU8 1353 aa5.4□□□□□ -1.55
HMGXB4-205ENST00000464480 TRAV20A0A0B4J274 112 aa5.39□□□□□ -1.55
HMGXB4-205ENST00000464480 A0A1W2PQU0 124 aa5.39□□□□□ -1.55
HMGXB4-205ENST00000464480 CYP26A1O43174 497 aa5.39□□□□□ -1.55
HMGXB4-205ENST00000464480 PRAMEF1O95521 474 aa5.39□□□□□ -1.55
HMGXB4-205ENST00000464480 ITGAVP06756 1048 aa5.39□□□□□ -1.55
HMGXB4-205ENST00000464480 HSD3B2P26439 372 aa5.39□□□□□ -1.55
HMGXB4-205ENST00000464480 CLCN7P51798 805 aa5.39□□□□□ -1.55
HMGXB4-205ENST00000464480 PPP2R2AP63151 447 aa5.39□□□□□ -1.55
HMGXB4-205ENST00000464480 GRB10Q13322 594 aa5.39□□□□□ -1.55
HMGXB4-205ENST00000464480 TAF7LQ5H9L4 462 aa5.39□□□□□ -1.55
HMGXB4-205ENST00000464480 CWF19L1Q69YN2 538 aaKnown RBP5.39□□□□□ -1.55
HMGXB4-205ENST00000464480 FIBCD1Q8N539 461 aa5.39□□□□□ -1.55
HMGXB4-205ENST00000464480 ZNF513Q8N8E2 541 aaPredicted RBP5.39□□□□□ -1.55
HMGXB4-205ENST00000464480 FAM181AQ8N9Y4 354 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms