RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 HUNKP57058 714 aa20.9■□□□□ 0.94
ATPAF2-202ENST00000462733 ZYXQ15942 572 aaKnown RBP20.9■□□□□ 0.94
ATPAF2-202ENST00000462733 CATIPQ7Z7H3 387 aa20.9■□□□□ 0.94
ATPAF2-202ENST00000462733 ZNF654Q8IZM8 581 aa20.9■□□□□ 0.94
ATPAF2-202ENST00000462733 NUP133Q8WUM0 1156 aa20.9■□□□□ 0.94
ATPAF2-202ENST00000462733 SLC10A4Q96EP9 437 aa20.9■□□□□ 0.94
ATPAF2-202ENST00000462733 FEZ1Q99689 392 aa20.9■□□□□ 0.94
ATPAF2-202ENST00000462733 AS3MTQ9HBK9 375 aa20.9■□□□□ 0.94
ATPAF2-202ENST00000462733 CCDC39Q9UFE4 941 aa20.9■□□□□ 0.94
ATPAF2-202ENST00000462733 SPP2Q13103 211 aa20.9■□□□□ 0.94
ATPAF2-202ENST00000462733 STK3Q13188 491 aa20.9■□□□□ 0.94
ATPAF2-202ENST00000462733 SYNE3Q6ZMZ3 975 aa20.9■□□□□ 0.94
ATPAF2-202ENST00000462733 MICU3Q86XE3 530 aa20.9■□□□□ 0.94
ATPAF2-202ENST00000462733 ZNF280CQ8ND82 737 aa20.9■□□□□ 0.94
ATPAF2-202ENST00000462733 MKL1Q969V6 931 aa20.9■□□□□ 0.94
ATPAF2-202ENST00000462733 OTUD5Q96G74 571 aa20.9■□□□□ 0.94
ATPAF2-202ENST00000462733 GDPD2Q9HCC8 539 aa20.9■□□□□ 0.94
ATPAF2-202ENST00000462733 TRIM75PA6NK02 468 aa20.89■□□□□ 0.93
ATPAF2-202ENST00000462733 GOLGA8BA8MQT2 603 aa20.89■□□□□ 0.93
ATPAF2-202ENST00000462733 APOA5Q6Q788 366 aa20.89■□□□□ 0.93
ATPAF2-202ENST00000462733 ERO1BQ86YB8 467 aa20.89■□□□□ 0.93
ATPAF2-202ENST00000462733 CCDC144CPQ8IYA2 1237 aa20.89■□□□□ 0.93
ATPAF2-202ENST00000462733 TMX2Q9Y320 296 aa20.89■□□□□ 0.93
ATPAF2-202ENST00000462733 ELP1O95163 1332 aa20.88■□□□□ 0.93
ATPAF2-202ENST00000462733 SPDYE5A6NIY4 337 aa20.88■□□□□ 0.93
ATPAF2-202ENST00000462733 UNCXA6NJT0 531 aa20.88■□□□□ 0.93
ATPAF2-202ENST00000462733 ZBTB43O43298 467 aa20.88■□□□□ 0.93
ATPAF2-202ENST00000462733 RASGRP2Q7LDG7 609 aa20.88■□□□□ 0.93
ATPAF2-202ENST00000462733 OPTNQ96CV9 577 aa20.88■□□□□ 0.93
ATPAF2-202ENST00000462733 WDR18Q9BV38 432 aa20.88■□□□□ 0.93
ATPAF2-202ENST00000462733 TCHHQ07283 1943 aa20.88■□□□□ 0.93
ATPAF2-202ENST00000462733 TMEM88BA6NKF7 163 aa20.87■□□□□ 0.93
ATPAF2-202ENST00000462733 USP17L10C9JJH3 530 aa20.87■□□□□ 0.93
ATPAF2-202ENST00000462733 PDIA3P30101 505 aaKnown RBP20.87■□□□□ 0.93
ATPAF2-202ENST00000462733 EVCP57679 992 aa20.87■□□□□ 0.93
ATPAF2-202ENST00000462733 PPATQ06203 517 aa20.87■□□□□ 0.93
ATPAF2-202ENST00000462733 MTMR2Q13614 643 aa20.87■□□□□ 0.93
ATPAF2-202ENST00000462733 SAPCD2Q86UD0 394 aa20.87■□□□□ 0.93
ATPAF2-202ENST00000462733 SH2D4AQ9H788 454 aa20.87■□□□□ 0.93
ATPAF2-202ENST00000462733 ABT1Q9ULW3 272 aaKnown RBP20.87■□□□□ 0.93
ATPAF2-202ENST00000462733 AFG3L2Q9Y4W6 797 aa20.87■□□□□ 0.93
ATPAF2-202ENST00000462733 ZNF500O60304 480 aaPredicted RBP20.87■□□□□ 0.93
ATPAF2-202ENST00000462733 CCT2P78371 535 aaKnown RBP20.87■□□□□ 0.93
ATPAF2-202ENST00000462733 TROAPQ12815 778 aa20.87■□□□□ 0.93
ATPAF2-202ENST00000462733 DGKZQ13574 1117 aa20.87■□□□□ 0.93
ATPAF2-202ENST00000462733 SPICE1Q8N0Z3 855 aa20.87■□□□□ 0.93
ATPAF2-202ENST00000462733 NAP1L5Q96NT1 182 aaPredicted RBP20.87■□□□□ 0.93
ATPAF2-202ENST00000462733 F5H6K3 240 aa20.86■□□□□ 0.93
ATPAF2-202ENST00000462733 DDAH1O94760 285 aa20.86■□□□□ 0.93
ATPAF2-202ENST00000462733 KLRC3Q07444 240 aa20.86■□□□□ 0.93
ATPAF2-202ENST00000462733 FOXD4L6Q3SYB3 417 aaPredicted RBP20.86■□□□□ 0.93
ATPAF2-202ENST00000462733 SLFN13Q68D06 897 aa20.86■□□□□ 0.93
ATPAF2-202ENST00000462733 FOXD4L3Q6VB84 417 aaPredicted RBP20.86■□□□□ 0.93
ATPAF2-202ENST00000462733 NECAB1Q8N987 351 aa20.86■□□□□ 0.93
ATPAF2-202ENST00000462733 ZNF274Q96GC6 653 aaPredicted RBP20.86■□□□□ 0.93
ATPAF2-202ENST00000462733 GOPCQ9HD26 462 aa20.86■□□□□ 0.93
ATPAF2-202ENST00000462733 HPS5Q9UPZ3 1129 aa20.86■□□□□ 0.93
ATPAF2-202ENST00000462733 GOLGA8AA7E2F4 631 aa20.85■□□□□ 0.93
ATPAF2-202ENST00000462733 IRF6O14896 467 aa20.85■□□□□ 0.93
ATPAF2-202ENST00000462733 FIBPO43427 364 aa20.85■□□□□ 0.93
ATPAF2-202ENST00000462733 NDUFB10O96000 172 aa20.85■□□□□ 0.93
ATPAF2-202ENST00000462733 METAP2P50579 478 aaKnown RBP eCLIP20.85■□□□□ 0.93
ATPAF2-202ENST00000462733 BACE1P56817 501 aa20.85■□□□□ 0.93
ATPAF2-202ENST00000462733 KRT85P78386 507 aa20.85■□□□□ 0.93
ATPAF2-202ENST00000462733 MKRN3Q13064 507 aaKnown RBP20.85■□□□□ 0.93
ATPAF2-202ENST00000462733 KIAA1755Q5JYT7 1200 aa20.85■□□□□ 0.93
ATPAF2-202ENST00000462733 LARP1BQ659C4 914 aaKnown RBP20.85■□□□□ 0.93
ATPAF2-202ENST00000462733 KIAA1683Q9H0B3 1180 aa20.85■□□□□ 0.93
ATPAF2-202ENST00000462733 VCPKMTQ9H867 229 aa20.85■□□□□ 0.93
ATPAF2-202ENST00000462733 ZKSCAN5Q9Y2L8 839 aa20.85■□□□□ 0.93
ATPAF2-202ENST00000462733 TLL2Q9Y6L7 1015 aa20.85■□□□□ 0.93
ATPAF2-202ENST00000462733 VPS37CA5D8V6 355 aaPredicted RBP20.84■□□□□ 0.93
ATPAF2-202ENST00000462733 PDHBP11177 359 aa20.84■□□□□ 0.93
ATPAF2-202ENST00000462733 GJA5P36382 358 aa20.84■□□□□ 0.93
ATPAF2-202ENST00000462733 PPIL2Q13356 520 aa20.84■□□□□ 0.93
ATPAF2-202ENST00000462733 USP17L2Q6R6M4 530 aa20.84■□□□□ 0.93
ATPAF2-202ENST00000462733 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.84■□□□□ 0.93
ATPAF2-202ENST00000462733 GMCL1P1Q8NEA9 526 aa20.84■□□□□ 0.93
ATPAF2-202ENST00000462733 NCOA5Q9HCD5 579 aaKnown RBP20.84■□□□□ 0.93
ATPAF2-202ENST00000462733 CALM1P0DP23 149 aa20.84■□□□□ 0.93
ATPAF2-202ENST00000462733 CALM2P0DP24 149 aa20.84■□□□□ 0.93
ATPAF2-202ENST00000462733 CALM3P0DP25 149 aa20.84■□□□□ 0.93
ATPAF2-202ENST00000462733 ZNF157P51786 506 aaPredicted RBP20.84■□□□□ 0.93
ATPAF2-202ENST00000462733 HMGCS2P54868 508 aa20.84■□□□□ 0.93
ATPAF2-202ENST00000462733 RTN1Q16799 776 aa20.84■□□□□ 0.93
ATPAF2-202ENST00000462733 WNK4Q96J92 1243 aa20.84■□□□□ 0.93
ATPAF2-202ENST00000462733 NUP88Q99567 741 aaPredicted RBP20.84■□□□□ 0.93
ATPAF2-202ENST00000462733 SYNPO2Q9UMS6 1093 aa20.84■□□□□ 0.93
ATPAF2-202ENST00000462733 PTPRFP10586 1907 aa20.84■□□□□ 0.93
ATPAF2-202ENST00000462733 FRMPD2Q68DX3 1309 aaPredicted RBP20.83■□□□□ 0.93
ATPAF2-202ENST00000462733 PFKFB2O60825 505 aa20.83■□□□□ 0.92
ATPAF2-202ENST00000462733 OFD1O75665 1012 aa20.83■□□□□ 0.92
ATPAF2-202ENST00000462733 GOLGA8HP0CJ92 632 aa20.83■□□□□ 0.92
ATPAF2-202ENST00000462733 SLC1A4P43007 532 aa20.83■□□□□ 0.92
ATPAF2-202ENST00000462733 USP14P54578 494 aa20.83■□□□□ 0.92
ATPAF2-202ENST00000462733 DNM1Q05193 864 aaKnown RBP20.83■□□□□ 0.92
ATPAF2-202ENST00000462733 SCRN1Q12765 414 aa20.83■□□□□ 0.92
ATPAF2-202ENST00000462733 CCDC96Q2M329 555 aa20.83■□□□□ 0.92
ATPAF2-202ENST00000462733 FANCBQ8NB91 859 aa20.83■□□□□ 0.92
ATPAF2-202ENST00000462733 CTCFLQ8NI51 663 aaPredicted RBP20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms