RNA–Protein interactions for RNA: ENST00000462181.1

CALD1-213, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 188 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-213ENST00000462181 C7orf61Q8IZ16 206 aa8.73□□□□□ -1.01
CALD1-213ENST00000462181 ENOX1Q8TC92 643 aaKnown RBP8.73□□□□□ -1.01
CALD1-213ENST00000462181 CARS2Q9HA77 564 aaKnown RBP8.73□□□□□ -1.01
CALD1-213ENST00000462181 PRKAG3Q9UGI9 489 aa8.73□□□□□ -1.01
CALD1-213ENST00000462181 DUSP13Q9UII6 198 aa8.73□□□□□ -1.01
CALD1-213ENST00000462181 OAS3Q9Y6K5 1087 aaKnown RBP8.73□□□□□ -1.01
CALD1-213ENST00000462181 SLC7A5Q01650 507 aa8.72□□□□□ -1.01
CALD1-213ENST00000462181 ABI1Q8IZP0 508 aa8.72□□□□□ -1.01
CALD1-213ENST00000462181 TANGO6Q9C0B7 1094 aa8.72□□□□□ -1.01
CALD1-213ENST00000462181 PCDHB10Q9UN67 800 aa8.72□□□□□ -1.01
CALD1-213ENST00000462181 R3HCC1Q9Y3T6 440 aaKnown RBP8.72□□□□□ -1.01
CALD1-213ENST00000462181 LTKP29376 864 aa8.71□□□□□ -1.02
CALD1-213ENST00000462181 ANKRD39Q53RE8 183 aa8.71□□□□□ -1.02
CALD1-213ENST00000462181 AXDND1Q5T1B0 1012 aaPredicted RBP8.71□□□□□ -1.02
CALD1-213ENST00000462181 DCAF15Q66K64 600 aa8.71□□□□□ -1.02
CALD1-213ENST00000462181 SYTL5Q8TDW5 730 aaPredicted RBP8.71□□□□□ -1.02
CALD1-213ENST00000462181 ACTR10Q9NZ32 417 aa8.71□□□□□ -1.02
CALD1-213ENST00000462181 SIGLEC6O43699 453 aa8.7□□□□□ -1.02
CALD1-213ENST00000462181 ESR1P03372 595 aa8.7□□□□□ -1.02
CALD1-213ENST00000462181 ATP2B1P20020 1258 aa8.7□□□□□ -1.02
CALD1-213ENST00000462181 GAB4Q2WGN9 574 aa8.7□□□□□ -1.02
CALD1-213ENST00000462181 NOL9Q5SY16 702 aaKnown RBP8.7□□□□□ -1.02
CALD1-213ENST00000462181 SLC23A3Q6PIS1 610 aa8.7□□□□□ -1.02
CALD1-213ENST00000462181 VHLLQ6RSH7 139 aa8.7□□□□□ -1.02
CALD1-213ENST00000462181 ZNF655Q8N720 491 aaPredicted RBP8.7□□□□□ -1.02
CALD1-213ENST00000462181 DAGLBQ8NCG7 672 aa8.7□□□□□ -1.02
CALD1-213ENST00000462181 HDAC8Q9BY41 377 aa8.7□□□□□ -1.02
CALD1-213ENST00000462181 PRDM7Q9NQW5 492 aa8.7□□□□□ -1.02
CALD1-213ENST00000462181 GFOD1Q9NXC2 390 aa8.7□□□□□ -1.02
CALD1-213ENST00000462181 PRAMEF1O95521 474 aa8.69□□□□□ -1.02
CALD1-213ENST00000462181 TCEAL1Q15170 157 aa8.69□□□□□ -1.02
CALD1-213ENST00000462181 LARP1BQ659C4 914 aaKnown RBP8.69□□□□□ -1.02
CALD1-213ENST00000462181 KIAA1211LQ6NV74 962 aa8.69□□□□□ -1.02
CALD1-213ENST00000462181 CHST7Q9NS84 486 aa8.69□□□□□ -1.02
CALD1-213ENST00000462181 PPP1R1BQ9UD71 204 aaPredicted RBP8.69□□□□□ -1.02
CALD1-213ENST00000462181 SSU72P8A0A1W2PR75 194 aa8.68□□□□□ -1.02
CALD1-213ENST00000462181 STK10O94804 968 aaKnown RBP8.68□□□□□ -1.02
CALD1-213ENST00000462181 CD247P20963 164 aa8.68□□□□□ -1.02
CALD1-213ENST00000462181 EGR3Q06889 387 aa8.68□□□□□ -1.02
CALD1-213ENST00000462181 ZNF792Q3KQV3 632 aa8.68□□□□□ -1.02
CALD1-213ENST00000462181 HEATR6Q6AI08 1181 aaKnown RBP8.68□□□□□ -1.02
CALD1-213ENST00000462181 SYTL4Q96C24 671 aaPredicted RBP8.68□□□□□ -1.02
CALD1-213ENST00000462181 TCTN2Q96GX1 697 aa8.68□□□□□ -1.02
CALD1-213ENST00000462181 DSCC1Q9BVC3 393 aa8.68□□□□□ -1.02
CALD1-213ENST00000462181 PRR13Q9NZ81 148 aa8.68□□□□□ -1.02
CALD1-213ENST00000462181 MEIS1O00470 390 aa8.67□□□□□ -1.02
CALD1-213ENST00000462181 SHOXO15266 292 aa8.67□□□□□ -1.02
CALD1-213ENST00000462181 RNASE1P07998 156 aaKnown RBP8.67□□□□□ -1.02
CALD1-213ENST00000462181 ITGA4P13612 1032 aa8.67□□□□□ -1.02
CALD1-213ENST00000462181 FXNQ16595 210 aa8.67□□□□□ -1.02
CALD1-213ENST00000462181 ANKS3Q6ZW76 656 aa8.67□□□□□ -1.02
CALD1-213ENST00000462181 HAUS7Q99871 368 aa8.67□□□□□ -1.02
CALD1-213ENST00000462181 GP6Q9HCN6 339 aa8.67□□□□□ -1.02
CALD1-213ENST00000462181 MBNL3Q9NUK0 354 aaKnown RBP8.67□□□□□ -1.02
CALD1-213ENST00000462181 MINPP1Q9UNW1 487 aa8.67□□□□□ -1.02
CALD1-213ENST00000462181 ZNF451Q9Y4E5 1061 aa8.67□□□□□ -1.02
CALD1-213ENST00000462181 PCDHA11Q9Y5I1 949 aa8.67□□□□□ -1.02
CALD1-213ENST00000462181 IRAK1P51617 712 aa8.66□□□□□ -1.02
CALD1-213ENST00000462181 NCAPHQ15003 741 aa8.66□□□□□ -1.02
CALD1-213ENST00000462181 ADAT2Q7Z6V5 191 aaKnown RBP8.66□□□□□ -1.02
CALD1-213ENST00000462181 USHBP1Q8N6Y0 703 aa8.66□□□□□ -1.02
CALD1-213ENST00000462181 KLHL6Q8WZ60 621 aa8.66□□□□□ -1.02
CALD1-213ENST00000462181 BRF1Q92994 677 aa8.66□□□□□ -1.02
CALD1-213ENST00000462181 ALPK1Q96QP1 1244 aa8.66□□□□□ -1.02
CALD1-213ENST00000462181 RC3H2Q9HBD1 1191 aaKnown RBP8.66□□□□□ -1.02
CALD1-213ENST00000462181 ADAMTS6Q9UKP5 1117 aa8.66□□□□□ -1.02
CALD1-213ENST00000462181 CBFA2T2O43439 604 aa8.65□□□□□ -1.02
CALD1-213ENST00000462181 DDAH1O94760 285 aa8.65□□□□□ -1.02
CALD1-213ENST00000462181 GTF2F1P35269 517 aaKnown RBP eCLIP8.65□□□□□ -1.02
CALD1-213ENST00000462181 PCBP3P57721 371 aaKnown RBP8.65□□□□□ -1.02
CALD1-213ENST00000462181 ZNF445P59923 1031 aa8.65□□□□□ -1.02
CALD1-213ENST00000462181 SF3A1Q15459 793 aaKnown RBP8.65□□□□□ -1.02
CALD1-213ENST00000462181 HNRNPLLQ8WVV9 542 aaKnown RBP8.65□□□□□ -1.02
CALD1-213ENST00000462181 CCDC120Q96HB5 630 aa8.65□□□□□ -1.02
CALD1-213ENST00000462181 GBP3Q9H0R5 595 aa8.65□□□□□ -1.02
CALD1-213ENST00000462181 SLAMF8Q9P0V8 285 aa8.65□□□□□ -1.02
CALD1-213ENST00000462181 ADGRE2Q9UHX3 823 aa8.65□□□□□ -1.02
CALD1-213ENST00000462181 XP32Q5T750 250 aa8.64□□□□□ -1.03
CALD1-213ENST00000462181 CWF19L1Q69YN2 538 aaKnown RBP8.64□□□□□ -1.03
CALD1-213ENST00000462181 C6orf15Q6UXA7 325 aaPredicted RBP8.64□□□□□ -1.03
CALD1-213ENST00000462181 RNF111Q6ZNA4 994 aa8.64□□□□□ -1.03
CALD1-213ENST00000462181 FAM178BQ8IXR5 827 aa8.64□□□□□ -1.03
CALD1-213ENST00000462181 CKAP2LQ8IYA6 745 aa8.64□□□□□ -1.03
CALD1-213ENST00000462181 FGD4Q96M96 766 aa8.64□□□□□ -1.03
CALD1-213ENST00000462181 FOXP3Q9BZS1 431 aa8.64□□□□□ -1.03
CALD1-213ENST00000462181 WHRNQ9P202 907 aa8.64□□□□□ -1.03
CALD1-213ENST00000462181 TCFL5Q9UL49 500 aa8.64□□□□□ -1.03
CALD1-213ENST00000462181 FHOD1Q9Y613 1164 aa8.64□□□□□ -1.03
CALD1-213ENST00000462181 A0A087WZG4 1122 aa8.63□□□□□ -1.03
CALD1-213ENST00000462181 LOC100996750A0A140TA64 210 aa8.63□□□□□ -1.03
CALD1-213ENST00000462181 PPM1BO75688 479 aa8.63□□□□□ -1.03
CALD1-213ENST00000462181 GSNP06396 782 aa8.63□□□□□ -1.03
CALD1-213ENST00000462181 EPHX1P07099 455 aa8.63□□□□□ -1.03
CALD1-213ENST00000462181 SYPP08247 313 aa8.63□□□□□ -1.03
CALD1-213ENST00000462181 FIBCD1Q8N539 461 aa8.63□□□□□ -1.03
CALD1-213ENST00000462181 LINC00116Q8NCU8 138 aa8.63□□□□□ -1.03
CALD1-213ENST00000462181 LRRN4CLQ8ND94 238 aa8.63□□□□□ -1.03
CALD1-213ENST00000462181 KRTAP4-6Q9BYQ5 205 aa8.63□□□□□ -1.03
CALD1-213ENST00000462181 KLHL25Q9H0H3 589 aa8.63□□□□□ -1.03
CALD1-213ENST00000462181 SUGT1Q9Y2Z0 365 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms