RNA–Protein interactions for RNA: ENST00000460625.1

UPK1B-202, Transcript of uroplakin 1B, humanhuman

TSL 1 (best) BASIC

Gene UPK1B, Length 1,937 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1B-202ENST00000460625 SCG2P13521 617 aa12.58□□□□□ -0.39
UPK1B-202ENST00000460625 KLRC3Q07444 240 aa12.58□□□□□ -0.39
UPK1B-202ENST00000460625 TRIM29Q14134 588 aa12.58□□□□□ -0.39
UPK1B-202ENST00000460625 ASPRV1Q53RT3 343 aa12.58□□□□□ -0.39
UPK1B-202ENST00000460625 KIAA1755Q5JYT7 1200 aa12.58□□□□□ -0.39
UPK1B-202ENST00000460625 SLFN13Q68D06 897 aa12.58□□□□□ -0.39
UPK1B-202ENST00000460625 RGS22Q8NE09 1264 aa12.58□□□□□ -0.39
UPK1B-202ENST00000460625 OXER1Q8TDS5 423 aa12.58□□□□□ -0.39
UPK1B-202ENST00000460625 GPKOWQ92917 476 aaPredicted RBP eCLIP12.58□□□□□ -0.39
UPK1B-202ENST00000460625 NUP88Q99567 741 aaPredicted RBP12.58□□□□□ -0.39
UPK1B-202ENST00000460625 SPZ1Q9BXG8 430 aa12.58□□□□□ -0.39
UPK1B-202ENST00000460625 VAT1LQ9HCJ6 419 aa12.58□□□□□ -0.39
UPK1B-202ENST00000460625 POTECB2RU33 542 aa12.58□□□□□ -0.4
UPK1B-202ENST00000460625 BTBD18B2RXH4 712 aa12.58□□□□□ -0.4
UPK1B-202ENST00000460625 ADM5C9JUS6 153 aa12.58□□□□□ -0.4
UPK1B-202ENST00000460625 ADAMTS3O15072 1205 aa12.58□□□□□ -0.4
UPK1B-202ENST00000460625 GADD45BO75293 160 aaPredicted RBP12.58□□□□□ -0.4
UPK1B-202ENST00000460625 NDUFB10O96000 172 aa12.58□□□□□ -0.4
UPK1B-202ENST00000460625 INPP5BP32019 993 aa12.58□□□□□ -0.4
UPK1B-202ENST00000460625 CCDC96Q2M329 555 aa12.58□□□□□ -0.4
UPK1B-202ENST00000460625 TYW1BQ6NUM6 668 aa12.58□□□□□ -0.4
UPK1B-202ENST00000460625 LZTS2Q9BRK4 669 aa12.58□□□□□ -0.4
UPK1B-202ENST00000460625 PITPNM2Q9BZ72 1349 aa12.57□□□□□ -0.4
UPK1B-202ENST00000460625 TRAK2O60296 914 aa12.57□□□□□ -0.4
UPK1B-202ENST00000460625 EPHX2P34913 555 aa12.57□□□□□ -0.4
UPK1B-202ENST00000460625 SLC16A2P36021 539 aa12.57□□□□□ -0.4
UPK1B-202ENST00000460625 NPY5RQ15761 445 aa12.57□□□□□ -0.4
UPK1B-202ENST00000460625 HOMER1Q86YM7 354 aa12.57□□□□□ -0.4
UPK1B-202ENST00000460625 DIS3L2Q8IYB7 885 aaKnown RBP12.57□□□□□ -0.4
UPK1B-202ENST00000460625 SPICE1Q8N0Z3 855 aa12.57□□□□□ -0.4
UPK1B-202ENST00000460625 GMCL1P1Q8NEA9 526 aa12.57□□□□□ -0.4
UPK1B-202ENST00000460625 PIGSQ96S52 555 aa12.57□□□□□ -0.4
UPK1B-202ENST00000460625 PHF20Q9BVI0 1012 aa12.57□□□□□ -0.4
UPK1B-202ENST00000460625 RIOX1Q9H6W3 641 aa12.57□□□□□ -0.4
UPK1B-202ENST00000460625 ZC3H4Q9UPT8 1303 aaKnown RBP12.57□□□□□ -0.4
UPK1B-202ENST00000460625 ASNSP08243 561 aa12.56□□□□□ -0.4
UPK1B-202ENST00000460625 U2AF2P26368 475 aaKnown RBP eCLIP12.56□□□□□ -0.4
UPK1B-202ENST00000460625 SLC1A4P43007 532 aa12.56□□□□□ -0.4
UPK1B-202ENST00000460625 KRT85P78386 507 aa12.56□□□□□ -0.4
UPK1B-202ENST00000460625 CEBPZQ03701 1054 aaKnown RBP12.56□□□□□ -0.4
UPK1B-202ENST00000460625 NR5A1Q13285 461 aa12.56□□□□□ -0.4
UPK1B-202ENST00000460625 WWC2Q6AWC2 1192 aa12.56□□□□□ -0.4
UPK1B-202ENST00000460625 TMEM87AQ8NBN3 555 aa12.56□□□□□ -0.4
UPK1B-202ENST00000460625 USP28Q96RU2 1077 aa12.56□□□□□ -0.4
UPK1B-202ENST00000460625 TMX2Q9Y320 296 aa12.56□□□□□ -0.4
UPK1B-202ENST00000460625 PPP2R3BQ9Y5P8 575 aa12.56□□□□□ -0.4
UPK1B-202ENST00000460625 SMARCA1P28370 1054 aa12.56□□□□□ -0.4
UPK1B-202ENST00000460625 GPATCH4Q5T3I0 446 aaKnown RBP12.56□□□□□ -0.4
UPK1B-202ENST00000460625 MYSM1Q5VVJ2 828 aa12.56□□□□□ -0.4
UPK1B-202ENST00000460625 ADGRF4Q8IZF3 695 aa12.56□□□□□ -0.4
UPK1B-202ENST00000460625 GPT2Q8TD30 523 aa12.56□□□□□ -0.4
UPK1B-202ENST00000460625 DCAF4Q8WV16 495 aa12.56□□□□□ -0.4
UPK1B-202ENST00000460625 ZKSCAN4Q969J2 545 aaPredicted RBP12.56□□□□□ -0.4
UPK1B-202ENST00000460625 ZNF341Q9BYN7 854 aa12.56□□□□□ -0.4
UPK1B-202ENST00000460625 JMJD4Q9H9V9 463 aa12.56□□□□□ -0.4
UPK1B-202ENST00000460625 ARHGEF10LQ9HCE6 1279 aa12.56□□□□□ -0.4
UPK1B-202ENST00000460625 ZNF112Q9UJU3 913 aa12.56□□□□□ -0.4
UPK1B-202ENST00000460625 ISY1Q9ULR0 285 aaKnown RBP12.56□□□□□ -0.4
UPK1B-202ENST00000460625 SCN4AP35499 1836 aa12.55□□□□□ -0.4
UPK1B-202ENST00000460625 DOCK1Q14185 1865 aa12.55□□□□□ -0.4
UPK1B-202ENST00000460625 USP17L10C9JJH3 530 aa12.55□□□□□ -0.4
UPK1B-202ENST00000460625 STXBP3O00186 592 aa12.55□□□□□ -0.4
UPK1B-202ENST00000460625 CTNND1O60716 968 aaKnown RBP12.55□□□□□ -0.4
UPK1B-202ENST00000460625 PRKG1Q13976 671 aa12.55□□□□□ -0.4
UPK1B-202ENST00000460625 ZYXQ15942 572 aaKnown RBP12.55□□□□□ -0.4
UPK1B-202ENST00000460625 TPRNQ4KMQ1 711 aa12.55□□□□□ -0.4
UPK1B-202ENST00000460625 NOM1Q5C9Z4 860 aaKnown RBP12.55□□□□□ -0.4
UPK1B-202ENST00000460625 EARS2Q5JPH6 523 aaKnown RBP12.55□□□□□ -0.4
UPK1B-202ENST00000460625 DCAF15Q66K64 600 aa12.55□□□□□ -0.4
UPK1B-202ENST00000460625 USP50Q70EL3 339 aaPredicted RBP12.55□□□□□ -0.4
UPK1B-202ENST00000460625 HEATR3Q7Z4Q2 680 aa12.55□□□□□ -0.4
UPK1B-202ENST00000460625 BRAPQ7Z569 592 aa12.55□□□□□ -0.4
UPK1B-202ENST00000460625 DCPSQ96C86 337 aaKnown RBP12.55□□□□□ -0.4
UPK1B-202ENST00000460625 RRP36Q96EU6 259 aaKnown RBP12.55□□□□□ -0.4
UPK1B-202ENST00000460625 GMCL1Q96IK5 515 aa12.55□□□□□ -0.4
UPK1B-202ENST00000460625 WRNIP1Q96S55 665 aa12.55□□□□□ -0.4
UPK1B-202ENST00000460625 TAF1DQ9H5J8 278 aaPredicted RBP12.55□□□□□ -0.4
UPK1B-202ENST00000460625 RBM27Q9P2N5 1060 aaKnown RBP12.55□□□□□ -0.4
UPK1B-202ENST00000460625 FAM205CA6NFA0 338 aa12.54□□□□□ -0.4
UPK1B-202ENST00000460625 XBP1P17861 261 aa12.54□□□□□ -0.4
UPK1B-202ENST00000460625 DGKZQ13574 1117 aa12.54□□□□□ -0.4
UPK1B-202ENST00000460625 GNL2Q13823 731 aaKnown RBP12.54□□□□□ -0.4
UPK1B-202ENST00000460625 SAFBQ15424 915 aaKnown RBP eCLIP12.54□□□□□ -0.4
UPK1B-202ENST00000460625 NOSTRINQ8IVI9 506 aa12.54□□□□□ -0.4
UPK1B-202ENST00000460625 LEO1Q8WVC0 666 aaPredicted RBP12.54□□□□□ -0.4
UPK1B-202ENST00000460625 BARHL2Q9NY43 387 aa12.54□□□□□ -0.4
UPK1B-202ENST00000460625 PPP1R11O60927 126 aaPredicted RBP12.54□□□□□ -0.4
UPK1B-202ENST00000460625 BMP3P12645 472 aa12.54□□□□□ -0.4
UPK1B-202ENST00000460625 NLRP5P59047 1200 aa12.54□□□□□ -0.4
UPK1B-202ENST00000460625 EAPPQ56P03 285 aaPredicted RBP12.54□□□□□ -0.4
UPK1B-202ENST00000460625 KRT26Q7Z3Y9 468 aa12.54□□□□□ -0.4
UPK1B-202ENST00000460625 SULF1Q8IWU6 871 aa12.54□□□□□ -0.4
UPK1B-202ENST00000460625 KLRG1Q96E93 195 aa12.54□□□□□ -0.4
UPK1B-202ENST00000460625 SPATA32Q96LK8 384 aa12.54□□□□□ -0.4
UPK1B-202ENST00000460625 FOXP1Q9H334 677 aaPredicted RBP12.54□□□□□ -0.4
UPK1B-202ENST00000460625 SYNPO2Q9UMS6 1093 aa12.54□□□□□ -0.4
UPK1B-202ENST00000460625 CLIC4Q9Y696 253 aa12.54□□□□□ -0.4
UPK1B-202ENST00000460625 WDR90Q96KV7 1748 aa12.54□□□□□ -0.4
UPK1B-202ENST00000460625 TMEM232C9JQI7 657 aa12.53□□□□□ -0.4
UPK1B-202ENST00000460625 USP2O75604 605 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms