RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 KIAA1755Q5JYT7 1200 aa19.48■□□□□ 0.71
NELFCD-201ENST00000460601 WASF1Q92558 559 aa19.48■□□□□ 0.71
NELFCD-201ENST00000460601 ATP6V1DQ9Y5K8 247 aa19.48■□□□□ 0.71
NELFCD-201ENST00000460601 POTECB2RU33 542 aa19.47■□□□□ 0.71
NELFCD-201ENST00000460601 F5H6K3 240 aa19.47■□□□□ 0.71
NELFCD-201ENST00000460601 KLRC3Q07444 240 aa19.47■□□□□ 0.71
NELFCD-201ENST00000460601 TRIM29Q14134 588 aa19.47■□□□□ 0.71
NELFCD-201ENST00000460601 LMBRD1Q9NUN5 540 aa19.47■□□□□ 0.71
NELFCD-201ENST00000460601 ADAMTS3O15072 1205 aa19.46■□□□□ 0.71
NELFCD-201ENST00000460601 MMP1P03956 469 aa19.46■□□□□ 0.71
NELFCD-201ENST00000460601 SCG2P13521 617 aa19.46■□□□□ 0.71
NELFCD-201ENST00000460601 CEBPZQ03701 1054 aaKnown RBP19.46■□□□□ 0.71
NELFCD-201ENST00000460601 PFKFB3Q16875 520 aaPredicted RBP19.46■□□□□ 0.71
NELFCD-201ENST00000460601 OXER1Q8TDS5 423 aa19.46■□□□□ 0.71
NELFCD-201ENST00000460601 ZKSCAN4Q969J2 545 aaPredicted RBP19.46■□□□□ 0.71
NELFCD-201ENST00000460601 ZSCAN16Q9H4T2 348 aaPredicted RBP19.46■□□□□ 0.71
NELFCD-201ENST00000460601 ATAD5Q96QE3 1844 aa19.46■□□□□ 0.71
NELFCD-201ENST00000460601 BTBD18B2RXH4 712 aa19.46■□□□□ 0.71
NELFCD-201ENST00000460601 NDUFB10O96000 172 aa19.46■□□□□ 0.71
NELFCD-201ENST00000460601 DEKP35659 375 aaKnown RBP19.46■□□□□ 0.71
NELFCD-201ENST00000460601 SLC1A4P43007 532 aa19.46■□□□□ 0.71
NELFCD-201ENST00000460601 GNAQP50148 359 aa19.46■□□□□ 0.71
NELFCD-201ENST00000460601 NR5A1Q13285 461 aa19.46■□□□□ 0.71
NELFCD-201ENST00000460601 EAPPQ56P03 285 aaPredicted RBP19.46■□□□□ 0.71
NELFCD-201ENST00000460601 SLFN13Q68D06 897 aa19.46■□□□□ 0.71
NELFCD-201ENST00000460601 TYW1BQ6NUM6 668 aa19.46■□□□□ 0.71
NELFCD-201ENST00000460601 GOLGA6L22H0YM25 854 aa19.45■□□□□ 0.7
NELFCD-201ENST00000460601 DGKZQ13574 1117 aa19.45■□□□□ 0.7
NELFCD-201ENST00000460601 ASPRV1Q53RT3 343 aa19.45■□□□□ 0.7
NELFCD-201ENST00000460601 USP48Q86UV5 1035 aa19.45■□□□□ 0.7
NELFCD-201ENST00000460601 PIGSQ96S52 555 aa19.45■□□□□ 0.7
NELFCD-201ENST00000460601 WRNIP1Q96S55 665 aa19.45■□□□□ 0.7
NELFCD-201ENST00000460601 SPZ1Q9BXG8 430 aa19.45■□□□□ 0.7
NELFCD-201ENST00000460601 ASNSP08243 561 aa19.45■□□□□ 0.7
NELFCD-201ENST00000460601 POTEIP0CG38 1075 aa19.45■□□□□ 0.7
NELFCD-201ENST00000460601 POTEJP0CG39 1038 aa19.45■□□□□ 0.7
NELFCD-201ENST00000460601 DIS3L2Q8IYB7 885 aaKnown RBP19.45■□□□□ 0.7
NELFCD-201ENST00000460601 DCPSQ96C86 337 aaKnown RBP19.45■□□□□ 0.7
NELFCD-201ENST00000460601 GADD45BO75293 160 aaPredicted RBP19.44■□□□□ 0.7
NELFCD-201ENST00000460601 NPY5RQ15761 445 aa19.44■□□□□ 0.7
NELFCD-201ENST00000460601 PPP4R3BQ5MIZ7 849 aa19.44■□□□□ 0.7
NELFCD-201ENST00000460601 WWC2Q6AWC2 1192 aa19.44■□□□□ 0.7
NELFCD-201ENST00000460601 KRT26Q7Z3Y9 468 aa19.44■□□□□ 0.7
NELFCD-201ENST00000460601 PHF20Q9BVI0 1012 aa19.44■□□□□ 0.7
NELFCD-201ENST00000460601 PITPNM2Q9BZ72 1349 aa19.44■□□□□ 0.7
NELFCD-201ENST00000460601 ZC3H4Q9UPT8 1303 aaKnown RBP19.44■□□□□ 0.7
NELFCD-201ENST00000460601 HEATR3Q7Z4Q2 680 aa19.43■□□□□ 0.7
NELFCD-201ENST00000460601 SULF1Q8IWU6 871 aa19.43■□□□□ 0.7
NELFCD-201ENST00000460601 ADGRF4Q8IZF3 695 aa19.43■□□□□ 0.7
NELFCD-201ENST00000460601 GMCL1P1Q8NEA9 526 aa19.43■□□□□ 0.7
NELFCD-201ENST00000460601 TAF1DQ9H5J8 278 aaPredicted RBP19.43■□□□□ 0.7
NELFCD-201ENST00000460601 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.43■□□□□ 0.7
NELFCD-201ENST00000460601 KRT85P78386 507 aa19.43■□□□□ 0.7
NELFCD-201ENST00000460601 GNL2Q13823 731 aaKnown RBP19.43■□□□□ 0.7
NELFCD-201ENST00000460601 USP28Q96RU2 1077 aa19.43■□□□□ 0.7
NELFCD-201ENST00000460601 LZTS2Q9BRK4 669 aa19.43■□□□□ 0.7
NELFCD-201ENST00000460601 ZNF341Q9BYN7 854 aa19.43■□□□□ 0.7
NELFCD-201ENST00000460601 RIOX1Q9H6W3 641 aa19.43■□□□□ 0.7
NELFCD-201ENST00000460601 ARHGEF10LQ9HCE6 1279 aa19.43■□□□□ 0.7
NELFCD-201ENST00000460601 TMX2Q9Y320 296 aa19.43■□□□□ 0.7
NELFCD-201ENST00000460601 MYH15Q9Y2K3 1946 aa19.43■□□□□ 0.7
NELFCD-201ENST00000460601 CTNND1O60716 968 aaKnown RBP19.42■□□□□ 0.7
NELFCD-201ENST00000460601 NOM1Q5C9Z4 860 aaKnown RBP19.42■□□□□ 0.7
NELFCD-201ENST00000460601 USP50Q70EL3 339 aaPredicted RBP19.42■□□□□ 0.7
NELFCD-201ENST00000460601 JMJD4Q9H9V9 463 aa19.42■□□□□ 0.7
NELFCD-201ENST00000460601 FAM205CA6NFA0 338 aa19.42■□□□□ 0.7
NELFCD-201ENST00000460601 USP17L10C9JJH3 530 aa19.42■□□□□ 0.7
NELFCD-201ENST00000460601 TRAK2O60296 914 aa19.42■□□□□ 0.7
NELFCD-201ENST00000460601 U2AF2P26368 475 aaKnown RBP eCLIP19.42■□□□□ 0.71e-7■■■□□ 14.6
NELFCD-201ENST00000460601 EARS2Q5JPH6 523 aaKnown RBP19.42■□□□□ 0.7
NELFCD-201ENST00000460601 GPATCH4Q5T3I0 446 aaKnown RBP19.42■□□□□ 0.7
NELFCD-201ENST00000460601 DCAF15Q66K64 600 aa19.42■□□□□ 0.7
NELFCD-201ENST00000460601 PPP2R3BQ9Y5P8 575 aa19.42■□□□□ 0.7
NELFCD-201ENST00000460601 SNAP25P60880 206 aa19.41■□□□□ 0.7
NELFCD-201ENST00000460601 MYSM1Q5VVJ2 828 aa19.41■□□□□ 0.7
NELFCD-201ENST00000460601 DCAF4Q8WV16 495 aa19.41■□□□□ 0.7
NELFCD-201ENST00000460601 KLRG1Q96E93 195 aa19.41■□□□□ 0.7
NELFCD-201ENST00000460601 RRP36Q96EU6 259 aaKnown RBP19.41■□□□□ 0.7
NELFCD-201ENST00000460601 XBP1P17861 261 aa19.4■□□□□ 0.7
NELFCD-201ENST00000460601 GPT2Q8TD30 523 aa19.4■□□□□ 0.7
NELFCD-201ENST00000460601 TMEM232C9JQI7 657 aa19.4■□□□□ 0.7
NELFCD-201ENST00000460601 STXBP3O00186 592 aa19.4■□□□□ 0.7
NELFCD-201ENST00000460601 PPP1R11O60927 126 aaPredicted RBP19.4■□□□□ 0.7
NELFCD-201ENST00000460601 NLRP5P59047 1200 aa19.4■□□□□ 0.7
NELFCD-201ENST00000460601 FAM83BQ5T0W9 1011 aa19.4■□□□□ 0.7
NELFCD-201ENST00000460601 NOSTRINQ8IVI9 506 aa19.4■□□□□ 0.7
NELFCD-201ENST00000460601 GMCL1Q96IK5 515 aa19.4■□□□□ 0.7
NELFCD-201ENST00000460601 BARHL2Q9NY43 387 aa19.4■□□□□ 0.7
NELFCD-201ENST00000460601 SEC63Q9UGP8 760 aaKnown RBP19.4■□□□□ 0.7
NELFCD-201ENST00000460601 ZNF112Q9UJU3 913 aa19.4■□□□□ 0.7
NELFCD-201ENST00000460601 BMP3P12645 472 aa19.39■□□□□ 0.69
NELFCD-201ENST00000460601 SAFBQ15424 915 aaKnown RBP eCLIP19.39■□□□□ 0.69
NELFCD-201ENST00000460601 BRAPQ7Z569 592 aa19.39■□□□□ 0.69
NELFCD-201ENST00000460601 LEO1Q8WVC0 666 aaPredicted RBP19.39■□□□□ 0.69
NELFCD-201ENST00000460601 SPATA32Q96LK8 384 aa19.39■□□□□ 0.69
NELFCD-201ENST00000460601 FEZ1Q99689 392 aa19.39■□□□□ 0.69
NELFCD-201ENST00000460601 RBM27Q9P2N5 1060 aaKnown RBP19.39■□□□□ 0.69
NELFCD-201ENST00000460601 CLIC4Q9Y696 253 aa19.39■□□□□ 0.69
NELFCD-201ENST00000460601 SCN4AP35499 1836 aa19.39■□□□□ 0.69
NELFCD-201ENST00000460601 IQCA1LA6NCM1 817 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms