RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 LPAR1Q92633 364 aa6.72□□□□□ -1.33
RNU1-88P-201ENST00000459274 PHKBQ93100 1093 aa6.72□□□□□ -1.33
RNU1-88P-201ENST00000459274 MKL1Q969V6 931 aa6.72□□□□□ -1.33
RNU1-88P-201ENST00000459274 L3MBTL3Q96JM7 780 aaPredicted RBP6.72□□□□□ -1.33
RNU1-88P-201ENST00000459274 SPATA32Q96LK8 384 aa6.72□□□□□ -1.33
RNU1-88P-201ENST00000459274 WRNIP1Q96S55 665 aa6.72□□□□□ -1.33
RNU1-88P-201ENST00000459274 EHMT1Q9H9B1 1298 aa6.72□□□□□ -1.33
RNU1-88P-201ENST00000459274 GPCPD1Q9NPB8 672 aa6.72□□□□□ -1.33
RNU1-88P-201ENST00000459274 IL17RBQ9NRM6 502 aa6.72□□□□□ -1.33
RNU1-88P-201ENST00000459274 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.72□□□□□ -1.33
RNU1-88P-201ENST00000459274 DDX49Q9Y6V7 483 aaKnown RBP6.72□□□□□ -1.33
RNU1-88P-201ENST00000459274 DDX60LQ5H9U9 1706 aaKnown RBP6.72□□□□□ -1.33
RNU1-88P-201ENST00000459274 PNMA6FA0A0J9YX94 578 aa6.71□□□□□ -1.34
RNU1-88P-201ENST00000459274 FAM196BA6NMK8 535 aa6.71□□□□□ -1.34
RNU1-88P-201ENST00000459274 F5H6K3 240 aa6.71□□□□□ -1.34
RNU1-88P-201ENST00000459274 PITPNM1O00562 1244 aa6.71□□□□□ -1.34
RNU1-88P-201ENST00000459274 JAK2O60674 1132 aa6.71□□□□□ -1.34
RNU1-88P-201ENST00000459274 BRD1O95696 1058 aa6.71□□□□□ -1.34
RNU1-88P-201ENST00000459274 FDX1P10109 184 aa6.71□□□□□ -1.34
RNU1-88P-201ENST00000459274 CDC27P30260 824 aa6.71□□□□□ -1.34
RNU1-88P-201ENST00000459274 MCM4P33991 863 aa6.71□□□□□ -1.34
RNU1-88P-201ENST00000459274 STAT2P52630 851 aa6.71□□□□□ -1.34
RNU1-88P-201ENST00000459274 KLRC3Q07444 240 aa6.71□□□□□ -1.34
RNU1-88P-201ENST00000459274 TROAPQ12815 778 aa6.71□□□□□ -1.34
RNU1-88P-201ENST00000459274 PABPC4Q13310 644 aaKnown RBP eCLIP6.71□□□□□ -1.34
RNU1-88P-201ENST00000459274 STK38Q15208 465 aa6.71□□□□□ -1.34
RNU1-88P-201ENST00000459274 NFKBIBQ15653 356 aa6.71□□□□□ -1.34
RNU1-88P-201ENST00000459274 RILPL1Q5EBL4 403 aa6.71□□□□□ -1.34
RNU1-88P-201ENST00000459274 KRT40Q6A162 431 aa6.71□□□□□ -1.34
RNU1-88P-201ENST00000459274 SAMD1Q6SPF0 538 aaPredicted RBP6.71□□□□□ -1.34
RNU1-88P-201ENST00000459274 TMTC3Q6ZXV5 915 aa6.71□□□□□ -1.34
RNU1-88P-201ENST00000459274 METTL16Q86W50 562 aaKnown RBP6.71□□□□□ -1.34
RNU1-88P-201ENST00000459274 HOMER1Q86YM7 354 aa6.71□□□□□ -1.34
RNU1-88P-201ENST00000459274 ZFPM1Q8IX07 1006 aa6.71□□□□□ -1.34
RNU1-88P-201ENST00000459274 SCYL3Q8IZE3 742 aa6.71□□□□□ -1.34
RNU1-88P-201ENST00000459274 LRRC47Q8N1G4 583 aaKnown RBP6.71□□□□□ -1.34
RNU1-88P-201ENST00000459274 C2orf69Q8N8R5 385 aa6.71□□□□□ -1.34
RNU1-88P-201ENST00000459274 GMCL1P1Q8NEA9 526 aa6.71□□□□□ -1.34
RNU1-88P-201ENST00000459274 PIBF1Q8WXW3 757 aa6.71□□□□□ -1.34
RNU1-88P-201ENST00000459274 NAP1L4Q99733 375 aaKnown RBP6.71□□□□□ -1.34
RNU1-88P-201ENST00000459274 SPZ1Q9BXG8 430 aa6.71□□□□□ -1.34
RNU1-88P-201ENST00000459274 FOXP1Q9H334 677 aaPredicted RBP6.71□□□□□ -1.34
RNU1-88P-201ENST00000459274 GPHNQ9NQX3 736 aaPredicted RBP6.71□□□□□ -1.34
RNU1-88P-201ENST00000459274 FEM1BQ9UK73 627 aa6.71□□□□□ -1.34
RNU1-88P-201ENST00000459274 ZBTB21Q9ULJ3 1066 aa6.71□□□□□ -1.34
RNU1-88P-201ENST00000459274 HPS5Q9UPZ3 1129 aa6.71□□□□□ -1.34
RNU1-88P-201ENST00000459274 PCDHAC2Q9Y5I4 1007 aa6.71□□□□□ -1.34
RNU1-88P-201ENST00000459274 BAZ2BQ9UIF8 2168 aaKnown RBP6.71□□□□□ -1.34
RNU1-88P-201ENST00000459274 MYH15Q9Y2K3 1946 aa6.7□□□□□ -1.34
RNU1-88P-201ENST00000459274 PALM3A6NDB9 673 aaPredicted RBP6.7□□□□□ -1.34
RNU1-88P-201ENST00000459274 TMEM232C9JQI7 657 aa6.7□□□□□ -1.34
RNU1-88P-201ENST00000459274 ZBED4O75132 1171 aa6.7□□□□□ -1.34
RNU1-88P-201ENST00000459274 PRPF40AO75400 957 aaKnown RBP6.7□□□□□ -1.34
RNU1-88P-201ENST00000459274 LETM1O95202 739 aaPredicted RBP6.7□□□□□ -1.34
RNU1-88P-201ENST00000459274 BAG4O95429 457 aaKnown RBP6.7□□□□□ -1.34
RNU1-88P-201ENST00000459274 MMP1P03956 469 aa6.7□□□□□ -1.34
RNU1-88P-201ENST00000459274 GOLGA8HP0CJ92 632 aa6.7□□□□□ -1.34
RNU1-88P-201ENST00000459274 PDHBP11177 359 aa6.7□□□□□ -1.34
RNU1-88P-201ENST00000459274 MAP3K9P80192 1104 aa6.7□□□□□ -1.34
RNU1-88P-201ENST00000459274 GUCY1B3Q02153 619 aa6.7□□□□□ -1.34
RNU1-88P-201ENST00000459274 ZNF543Q08ER8 600 aa6.7□□□□□ -1.34
RNU1-88P-201ENST00000459274 PRKG1Q13976 671 aa6.7□□□□□ -1.34
RNU1-88P-201ENST00000459274 PFKFB3Q16875 520 aaPredicted RBP6.7□□□□□ -1.34
RNU1-88P-201ENST00000459274 FOXD4L6Q3SYB3 417 aaPredicted RBP6.7□□□□□ -1.34
RNU1-88P-201ENST00000459274 USP17L2Q6R6M4 530 aa6.7□□□□□ -1.34
RNU1-88P-201ENST00000459274 FOXD4L3Q6VB84 417 aaPredicted RBP6.7□□□□□ -1.34
RNU1-88P-201ENST00000459274 FERMT3Q86UX7 667 aa6.7□□□□□ -1.34
RNU1-88P-201ENST00000459274 ANKRD13AQ8IZ07 590 aa6.7□□□□□ -1.34
RNU1-88P-201ENST00000459274 SLC10A4Q96EP9 437 aa6.7□□□□□ -1.34
RNU1-88P-201ENST00000459274 GMCL1Q96IK5 515 aa6.7□□□□□ -1.34
RNU1-88P-201ENST00000459274 ZBED3Q96IU2 234 aaPredicted RBP6.7□□□□□ -1.34
RNU1-88P-201ENST00000459274 AMNQ9BXJ7 453 aa6.7□□□□□ -1.34
RNU1-88P-201ENST00000459274 TANGO6Q9C0B7 1094 aa6.7□□□□□ -1.34
RNU1-88P-201ENST00000459274 HOOK1Q9UJC3 728 aaKnown RBP6.7□□□□□ -1.34
RNU1-88P-201ENST00000459274 TMX2Q9Y320 296 aa6.7□□□□□ -1.34
RNU1-88P-201ENST00000459274 DOCK1Q14185 1865 aa6.7□□□□□ -1.34
RNU1-88P-201ENST00000459274 FRMPD2Q68DX3 1309 aaPredicted RBP6.7□□□□□ -1.34
RNU1-88P-201ENST00000459274 CNTNAP1P78357 1384 aa6.69□□□□□ -1.34
RNU1-88P-201ENST00000459274 NID2Q14112 1375 aa6.69□□□□□ -1.34
RNU1-88P-201ENST00000459274 COL4A5P29400 1685 aa6.69□□□□□ -1.34
RNU1-88P-201ENST00000459274 SMCO2A6NFE2 343 aa6.69□□□□□ -1.34
RNU1-88P-201ENST00000459274 UNCXA6NJT0 531 aa6.69□□□□□ -1.34
RNU1-88P-201ENST00000459274 B4DLN1 442 aa6.69□□□□□ -1.34
RNU1-88P-201ENST00000459274 ZBTB5O15062 677 aa6.69□□□□□ -1.34
RNU1-88P-201ENST00000459274 FIBPO43427 364 aa6.69□□□□□ -1.34
RNU1-88P-201ENST00000459274 PPFIA3O75145 1194 aa6.69□□□□□ -1.34
RNU1-88P-201ENST00000459274 DDIT3P35638 169 aa6.69□□□□□ -1.34
RNU1-88P-201ENST00000459274 TXLNAP40222 546 aa6.69□□□□□ -1.34
RNU1-88P-201ENST00000459274 ME1P48163 572 aa6.69□□□□□ -1.34
RNU1-88P-201ENST00000459274 ADCY7P51828 1080 aa6.69□□□□□ -1.34
RNU1-88P-201ENST00000459274 ZYXQ15942 572 aaKnown RBP6.69□□□□□ -1.34
RNU1-88P-201ENST00000459274 NBPF12Q5TAG4 269 aaPredicted RBP6.69□□□□□ -1.34
RNU1-88P-201ENST00000459274 CCDC73Q6ZRK6 1079 aa6.69□□□□□ -1.34
RNU1-88P-201ENST00000459274 CLEC17AQ6ZS10 378 aa6.69□□□□□ -1.34
RNU1-88P-201ENST00000459274 KCTD1Q719H9 257 aa6.69□□□□□ -1.34
RNU1-88P-201ENST00000459274 SH3BP5LQ7L8J4 393 aa6.69□□□□□ -1.34
RNU1-88P-201ENST00000459274 KRT25Q7Z3Z0 450 aa6.69□□□□□ -1.34
RNU1-88P-201ENST00000459274 FBXO11Q86XK2 927 aa6.69□□□□□ -1.34
RNU1-88P-201ENST00000459274 MCF2L2Q86YR7 1114 aa6.69□□□□□ -1.34
RNU1-88P-201ENST00000459274 NOSTRINQ8IVI9 506 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms