RNA–Protein interactions for RNA: ENST00000457823.6

SMARCAD1-204, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-204ENST00000457823 NDC80O14777 642 aa13□□□□□ -0.33
SMARCAD1-204ENST00000457823 BRDTQ58F21 947 aaPredicted RBP13□□□□□ -0.33
SMARCAD1-204ENST00000457823 ASIC3Q9UHC3 531 aa13□□□□□ -0.33
SMARCAD1-204ENST00000457823 UTP11Q9Y3A2 253 aaKnown RBP13□□□□□ -0.33
SMARCAD1-204ENST00000457823 ALAS1P13196 640 aa13□□□□□ -0.33
SMARCAD1-204ENST00000457823 RBM6P78332 1123 aaKnown RBP13□□□□□ -0.33
SMARCAD1-204ENST00000457823 ERBB3P21860 1342 aa12.99□□□□□ -0.33
SMARCAD1-204ENST00000457823 XRCC5P13010 732 aaKnown RBP12.99□□□□□ -0.33
SMARCAD1-204ENST00000457823 TNNI1P19237 187 aa12.99□□□□□ -0.33
SMARCAD1-204ENST00000457823 CYP2J2P51589 502 aa12.99□□□□□ -0.33
SMARCAD1-204ENST00000457823 CEP57Q86XR8 500 aa12.99□□□□□ -0.33
SMARCAD1-204ENST00000457823 KIAA1524Q8TCG1 905 aa12.99□□□□□ -0.33
SMARCAD1-204ENST00000457823 FAM204AQ9H8W3 233 aa12.99□□□□□ -0.33
SMARCAD1-204ENST00000457823 TESPA1A2RU30 521 aaPredicted RBP12.99□□□□□ -0.33
SMARCAD1-204ENST00000457823 PTPN12Q05209 780 aaKnown RBP12.99□□□□□ -0.33
SMARCAD1-204ENST00000457823 MORC3Q14149 939 aa12.99□□□□□ -0.33
SMARCAD1-204ENST00000457823 CFAP221Q4G0U5 840 aa12.99□□□□□ -0.33
SMARCAD1-204ENST00000457823 GLG1Q92896 1179 aa12.99□□□□□ -0.33
SMARCAD1-204ENST00000457823 GDAP1L1Q96MZ0 367 aa12.99□□□□□ -0.33
SMARCAD1-204ENST00000457823 TRIM6Q9C030 488 aaPredicted RBP12.99□□□□□ -0.33
SMARCAD1-204ENST00000457823 ICA1Q05084 483 aa12.99□□□□□ -0.33
SMARCAD1-204ENST00000457823 GPATCH11Q8N954 259 aa12.99□□□□□ -0.33
SMARCAD1-204ENST00000457823 NUCKS1Q9H1E3 243 aaKnown RBP12.99□□□□□ -0.33
SMARCAD1-204ENST00000457823 PLEKHA4Q9H4M7 779 aa12.99□□□□□ -0.33
SMARCAD1-204ENST00000457823 MYO1AQ9UBC5 1043 aa12.99□□□□□ -0.33
SMARCAD1-204ENST00000457823 ARMCX3Q9UH62 379 aaPredicted RBP12.99□□□□□ -0.33
SMARCAD1-204ENST00000457823 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.99□□□□□ -0.33
SMARCAD1-204ENST00000457823 TCP10L2B9ZVM9 353 aa12.98□□□□□ -0.33
SMARCAD1-204ENST00000457823 NDUFAB1O14561 156 aa12.98□□□□□ -0.33
SMARCAD1-204ENST00000457823 KRT19P08727 400 aa12.98□□□□□ -0.33
SMARCAD1-204ENST00000457823 STAT1P42224 750 aa12.98□□□□□ -0.33
SMARCAD1-204ENST00000457823 DNM2P50570 870 aa12.98□□□□□ -0.33
SMARCAD1-204ENST00000457823 IRX3P78415 501 aaPredicted RBP12.98□□□□□ -0.33
SMARCAD1-204ENST00000457823 SLC39A14Q15043 492 aa12.98□□□□□ -0.33
SMARCAD1-204ENST00000457823 FAM182BQ5T319 152 aa12.98□□□□□ -0.33
SMARCAD1-204ENST00000457823 MIER3Q7Z3K6 550 aa12.98□□□□□ -0.33
SMARCAD1-204ENST00000457823 SLC39A2Q9NP94 309 aa12.98□□□□□ -0.33
SMARCAD1-204ENST00000457823 PCDHA1Q9Y5I3 950 aa12.98□□□□□ -0.33
SMARCAD1-204ENST00000457823 SAMD9Q5K651 1589 aa12.98□□□□□ -0.33
SMARCAD1-204ENST00000457823 MED23Q9ULK4 1368 aa12.98□□□□□ -0.33
SMARCAD1-204ENST00000457823 H7C1D1 291 aa12.98□□□□□ -0.33
SMARCAD1-204ENST00000457823 RASA3Q14644 834 aa12.98□□□□□ -0.33
SMARCAD1-204ENST00000457823 PPP1R21Q6ZMI0 780 aa12.98□□□□□ -0.33
SMARCAD1-204ENST00000457823 SND1Q7KZF4 910 aaKnown RBP eCLIP12.98□□□□□ -0.33
SMARCAD1-204ENST00000457823 NSUN7Q8NE18 718 aaKnown RBP12.98□□□□□ -0.33
SMARCAD1-204ENST00000457823 OSBP2Q969R2 916 aa12.98□□□□□ -0.33
SMARCAD1-204ENST00000457823 RABEP2Q9H5N1 569 aa12.98□□□□□ -0.33
SMARCAD1-204ENST00000457823 RTEL1Q9NZ71 1219 aa12.98□□□□□ -0.33
SMARCAD1-204ENST00000457823 E7EVH7 732 aa12.98□□□□□ -0.33
SMARCAD1-204ENST00000457823 SLFN13Q68D06 897 aa12.98□□□□□ -0.33
SMARCAD1-204ENST00000457823 FBXO11Q86XK2 927 aa12.98□□□□□ -0.33
SMARCAD1-204ENST00000457823 TRIML1Q8N9V2 468 aa12.98□□□□□ -0.33
SMARCAD1-204ENST00000457823 AFAP1L1Q8TED9 768 aa12.98□□□□□ -0.33
SMARCAD1-204ENST00000457823 CCDC51Q96ER9 411 aa12.98□□□□□ -0.33
SMARCAD1-204ENST00000457823 SAR1BQ9Y6B6 198 aa12.98□□□□□ -0.33
SMARCAD1-204ENST00000457823 GTPBP6O43824 516 aaPredicted RBP12.98□□□□□ -0.33
SMARCAD1-204ENST00000457823 DYNLL1P63167 89 aaKnown RBP12.98□□□□□ -0.33
SMARCAD1-204ENST00000457823 SETDB1Q15047 1291 aa12.98□□□□□ -0.33
SMARCAD1-204ENST00000457823 SYMPKQ92797 1274 aaKnown RBP12.98□□□□□ -0.33
SMARCAD1-204ENST00000457823 KDM3AQ9Y4C1 1321 aa12.97□□□□□ -0.33
SMARCAD1-204ENST00000457823 USP6P35125 1406 aa12.97□□□□□ -0.33
SMARCAD1-204ENST00000457823 GOLGA6CA6NDK9 693 aa12.97□□□□□ -0.33
SMARCAD1-204ENST00000457823 PRKAB2O43741 272 aa12.97□□□□□ -0.33
SMARCAD1-204ENST00000457823 DDAH1O94760 285 aa12.97□□□□□ -0.33
SMARCAD1-204ENST00000457823 SASH1O94885 1247 aa12.97□□□□□ -0.33
SMARCAD1-204ENST00000457823 GOLGA6DP0CG33 693 aa12.97□□□□□ -0.33
SMARCAD1-204ENST00000457823 ABCB4P21439 1286 aa12.97□□□□□ -0.33
SMARCAD1-204ENST00000457823 ETF1P62495 437 aaKnown RBP12.97□□□□□ -0.33
SMARCAD1-204ENST00000457823 CYP4A11Q02928 519 aa12.97□□□□□ -0.33
SMARCAD1-204ENST00000457823 NLRP10Q86W26 655 aa12.97□□□□□ -0.33
SMARCAD1-204ENST00000457823 CCDC105Q8IYK2 499 aa12.97□□□□□ -0.33
SMARCAD1-204ENST00000457823 RNF34Q969K3 372 aa12.97□□□□□ -0.33
SMARCAD1-204ENST00000457823 GOLGA6AQ9NYA3 693 aa12.97□□□□□ -0.33
SMARCAD1-204ENST00000457823 BCS1LQ9Y276 419 aa12.97□□□□□ -0.33
SMARCAD1-204ENST00000457823 TNFAIP1Q13829 316 aa12.97□□□□□ -0.33
SMARCAD1-204ENST00000457823 CCDC14Q49A88 953 aa12.97□□□□□ -0.33
SMARCAD1-204ENST00000457823 SPATA1Q5VX52 437 aa12.97□□□□□ -0.33
SMARCAD1-204ENST00000457823 C10orf67Q8IYJ2 551 aa12.97□□□□□ -0.33
SMARCAD1-204ENST00000457823 MRFAP1L1Q96HT8 127 aa12.97□□□□□ -0.33
SMARCAD1-204ENST00000457823 PLEKHG1Q9ULL1 1385 aa12.97□□□□□ -0.33
SMARCAD1-204ENST00000457823 A0A1W2PQ27 194 aa12.97□□□□□ -0.33
SMARCAD1-204ENST00000457823 A0A1W2PQ64 194 aa12.97□□□□□ -0.33
SMARCAD1-204ENST00000457823 A0A1W2PQD8 194 aa12.97□□□□□ -0.33
SMARCAD1-204ENST00000457823 TMEM232C9JQI7 657 aa12.97□□□□□ -0.33
SMARCAD1-204ENST00000457823 CUL4AQ13619 759 aa12.97□□□□□ -0.33
SMARCAD1-204ENST00000457823 NLGN1Q8N2Q7 840 aa12.97□□□□□ -0.33
SMARCAD1-204ENST00000457823 U2AF1L4Q8WU68 220 aaKnown RBP12.97□□□□□ -0.33
SMARCAD1-204ENST00000457823 LSM14BQ9BX40 385 aaKnown RBP12.97□□□□□ -0.33
SMARCAD1-204ENST00000457823 TRIM7Q9C029 511 aa12.97□□□□□ -0.33
SMARCAD1-204ENST00000457823 PUS7LQ9H0K6 701 aaKnown RBP12.97□□□□□ -0.33
SMARCAD1-204ENST00000457823 DDX41Q9UJV9 622 aaKnown RBP12.97□□□□□ -0.33
SMARCAD1-204ENST00000457823 WDR17Q8IZU2 1322 aa12.97□□□□□ -0.33
SMARCAD1-204ENST00000457823 UGGT1Q9NYU2 1555 aa12.97□□□□□ -0.33
SMARCAD1-204ENST00000457823 GOLGA6BA6NDN3 693 aa12.97□□□□□ -0.33
SMARCAD1-204ENST00000457823 GNA14O95837 355 aa12.97□□□□□ -0.33
SMARCAD1-204ENST00000457823 GALNT17Q6IS24 598 aa12.97□□□□□ -0.33
SMARCAD1-204ENST00000457823 FAM196AQ6ZSG2 479 aa12.97□□□□□ -0.33
SMARCAD1-204ENST00000457823 KDM5AP29375 1690 aaKnown RBP12.96□□□□□ -0.33
SMARCAD1-204ENST00000457823 ZFYVE16Q7Z3T8 1539 aa12.96□□□□□ -0.33
SMARCAD1-204ENST00000457823 PCP11498 1178 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms