RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 KMT5BQ4FZB7 885 aa11.29□□□□□ -0.6
SCN10A-201ENST00000449082 COPRSQ9NQ92 184 aa11.29□□□□□ -0.6
SCN10A-201ENST00000449082 ME3Q16798 604 aa11.29□□□□□ -0.6
SCN10A-201ENST00000449082 MYSM1Q5VVJ2 828 aa11.29□□□□□ -0.6
SCN10A-201ENST00000449082 IPO4Q8TEX9 1081 aaKnown RBP11.29□□□□□ -0.6
SCN10A-201ENST00000449082 SERTAD1Q9UHV2 236 aa11.29□□□□□ -0.6
SCN10A-201ENST00000449082 CCPG1Q9ULG6 757 aa11.29□□□□□ -0.6
SCN10A-201ENST00000449082 TMEM232C9JQI7 657 aa11.29□□□□□ -0.6
SCN10A-201ENST00000449082 TECP42680 631 aa11.29□□□□□ -0.6
SCN10A-201ENST00000449082 ITIH3Q06033 890 aa11.29□□□□□ -0.6
SCN10A-201ENST00000449082 UTP14CQ5TAP6 766 aaKnown RBP11.29□□□□□ -0.6
SCN10A-201ENST00000449082 CCDC121Q6ZUS5 278 aa11.29□□□□□ -0.6
SCN10A-201ENST00000449082 CBX8Q9HC52 389 aa11.29□□□□□ -0.6
SCN10A-201ENST00000449082 SAMD15Q9P1V8 674 aa11.29□□□□□ -0.6
SCN10A-201ENST00000449082 DDX25Q9UHL0 483 aaKnown RBP11.29□□□□□ -0.6
SCN10A-201ENST00000449082 MAGI2Q86UL8 1455 aa11.29□□□□□ -0.6
SCN10A-201ENST00000449082 CLCN1P35523 988 aa11.28□□□□□ -0.6
SCN10A-201ENST00000449082 CCNA1P78396 465 aa11.28□□□□□ -0.6
SCN10A-201ENST00000449082 GABPAQ06546 454 aa11.28□□□□□ -0.6
SCN10A-201ENST00000449082 SETDB1Q15047 1291 aa11.28□□□□□ -0.6
SCN10A-201ENST00000449082 FAM160B1Q5W0V3 765 aa11.28□□□□□ -0.6
SCN10A-201ENST00000449082 HDXQ7Z353 690 aa11.28□□□□□ -0.6
SCN10A-201ENST00000449082 PLA2G4DQ86XP0 818 aa11.28□□□□□ -0.6
SCN10A-201ENST00000449082 NRBP2Q9NSY0 501 aa11.28□□□□□ -0.6
SCN10A-201ENST00000449082 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.28□□□□□ -0.6
SCN10A-201ENST00000449082 FOSP01100 380 aaPredicted RBP11.28□□□□□ -0.6
SCN10A-201ENST00000449082 FGAP02671 866 aa11.28□□□□□ -0.6
SCN10A-201ENST00000449082 OR52Z1P0C646 297 aa11.28□□□□□ -0.6
SCN10A-201ENST00000449082 ATF7P17544 494 aaPredicted RBP11.28□□□□□ -0.6
SCN10A-201ENST00000449082 YARSP54577 528 aaKnown RBP11.28□□□□□ -0.6
SCN10A-201ENST00000449082 GEN1Q17RS7 908 aa11.28□□□□□ -0.6
SCN10A-201ENST00000449082 MYOCDQ8IZQ8 938 aa11.28□□□□□ -0.6
SCN10A-201ENST00000449082 ZBTB1Q9Y2K1 713 aa11.28□□□□□ -0.6
SCN10A-201ENST00000449082 PFKFB2O60825 505 aa11.28□□□□□ -0.6
SCN10A-201ENST00000449082 TNNC2P02585 160 aa11.28□□□□□ -0.6
SCN10A-201ENST00000449082 TMOD1P28289 359 aa11.28□□□□□ -0.6
SCN10A-201ENST00000449082 PHKA1P46020 1223 aa11.28□□□□□ -0.6
SCN10A-201ENST00000449082 ADALQ6DHV7 355 aa11.28□□□□□ -0.6
SCN10A-201ENST00000449082 CMTR1Q8N1G2 835 aaKnown RBP11.28□□□□□ -0.6
SCN10A-201ENST00000449082 RDH13Q8NBN7 331 aa11.28□□□□□ -0.6
SCN10A-201ENST00000449082 MAIP1Q8WWC4 291 aa11.28□□□□□ -0.6
SCN10A-201ENST00000449082 STAMQ92783 540 aa11.28□□□□□ -0.6
SCN10A-201ENST00000449082 SEC62Q99442 399 aaKnown RBP11.28□□□□□ -0.6
SCN10A-201ENST00000449082 TSKSQ9UJT2 592 aa11.28□□□□□ -0.6
SCN10A-201ENST00000449082 GCC2Q8IWJ2 1684 aa11.28□□□□□ -0.6
SCN10A-201ENST00000449082 KDM5CP41229 1560 aa11.28□□□□□ -0.6
SCN10A-201ENST00000449082 GMNNO75496 209 aa11.28□□□□□ -0.6
SCN10A-201ENST00000449082 OSBPP22059 807 aa11.28□□□□□ -0.6
SCN10A-201ENST00000449082 USP14P54578 494 aa11.28□□□□□ -0.6
SCN10A-201ENST00000449082 ARHGAP44Q17R89 818 aa11.28□□□□□ -0.6
SCN10A-201ENST00000449082 SUPT20HL1Q3ZLR7 823 aa11.28□□□□□ -0.6
SCN10A-201ENST00000449082 TBC1D31Q96DN5 1066 aa11.28□□□□□ -0.6
SCN10A-201ENST00000449082 RSPH14Q9UHP6 348 aa11.28□□□□□ -0.6
SCN10A-201ENST00000449082 N4BP1O75113 896 aaKnown RBP11.27□□□□□ -0.6
SCN10A-201ENST00000449082 GOLGA8HP0CJ92 632 aa11.27□□□□□ -0.6
SCN10A-201ENST00000449082 XRCC5P13010 732 aaKnown RBP11.27□□□□□ -0.6
SCN10A-201ENST00000449082 ZBTB24O43167 697 aaPredicted RBP11.27□□□□□ -0.61
SCN10A-201ENST00000449082 CYP2J2P51589 502 aa11.27□□□□□ -0.61
SCN10A-201ENST00000449082 ZNF75DP51815 510 aa11.27□□□□□ -0.61
SCN10A-201ENST00000449082 PTH1RQ03431 593 aa11.27□□□□□ -0.61
SCN10A-201ENST00000449082 IGSF1Q8N6C5 1336 aa11.27□□□□□ -0.61
SCN10A-201ENST00000449082 NBPF11Q86T75 865 aa11.27□□□□□ -0.61
SCN10A-201ENST00000449082 FAM193BQ96PV7 902 aaPredicted RBP11.27□□□□□ -0.61
SCN10A-201ENST00000449082 MED10Q9BTT4 135 aa11.27□□□□□ -0.61
SCN10A-201ENST00000449082 ZEB2O60315 1214 aa11.27□□□□□ -0.61
SCN10A-201ENST00000449082 KCTD2Q14681 263 aa11.27□□□□□ -0.61
SCN10A-201ENST00000449082 ANKARQ7Z5J8 1434 aa11.27□□□□□ -0.61
SCN10A-201ENST00000449082 IFT20Q8IY31 132 aa11.27□□□□□ -0.61
SCN10A-201ENST00000449082 RNF169Q8NCN4 708 aa11.27□□□□□ -0.61
SCN10A-201ENST00000449082 VPS18Q9P253 973 aa11.27□□□□□ -0.61
SCN10A-201ENST00000449082 K7ENM7 598 aa11.27□□□□□ -0.61
SCN10A-201ENST00000449082 RNASE9P60153 205 aaKnown RBP11.27□□□□□ -0.61
SCN10A-201ENST00000449082 GPATCH4Q5T3I0 446 aaKnown RBP11.27□□□□□ -0.61
SCN10A-201ENST00000449082 FAM76AQ8TAV0 307 aa11.27□□□□□ -0.61
SCN10A-201ENST00000449082 CSRNP1Q96S65 589 aa11.27□□□□□ -0.61
SCN10A-201ENST00000449082 PANK4Q9NVE7 773 aa11.27□□□□□ -0.61
SCN10A-201ENST00000449082 RNF123Q5XPI4 1314 aa11.26□□□□□ -0.61
SCN10A-201ENST00000449082 CAPN2P17655 700 aa11.26□□□□□ -0.61
SCN10A-201ENST00000449082 ERCC3P19447 782 aa11.26□□□□□ -0.61
SCN10A-201ENST00000449082 EVCP57679 992 aa11.26□□□□□ -0.61
SCN10A-201ENST00000449082 PNOCQ13519 176 aa11.26□□□□□ -0.61
SCN10A-201ENST00000449082 POLA2Q14181 598 aa11.26□□□□□ -0.61
SCN10A-201ENST00000449082 ERFEQ4G0M1 354 aa11.26□□□□□ -0.61
SCN10A-201ENST00000449082 ASPRV1Q53RT3 343 aa11.26□□□□□ -0.61
SCN10A-201ENST00000449082 TRERF1Q96PN7 1200 aa11.26□□□□□ -0.61
SCN10A-201ENST00000449082 MYO1AQ9UBC5 1043 aa11.26□□□□□ -0.61
SCN10A-201ENST00000449082 ASIC3Q9UHC3 531 aa11.26□□□□□ -0.61
SCN10A-201ENST00000449082 THRAP3Q9Y2W1 955 aaKnown RBP11.26□□□□□ -0.61
SCN10A-201ENST00000449082 CEP104O60308 925 aa11.26□□□□□ -0.61
SCN10A-201ENST00000449082 ZMYND15Q9H091 742 aa11.26□□□□□ -0.61
SCN10A-201ENST00000449082 NBPF3Q9H094 633 aa11.26□□□□□ -0.61
SCN10A-201ENST00000449082 ZSWIM6Q9HCJ5 1215 aa11.26□□□□□ -0.61
SCN10A-201ENST00000449082 USP6P35125 1406 aa11.26□□□□□ -0.61
SCN10A-201ENST00000449082 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.26□□□□□ -0.61
SCN10A-201ENST00000449082 DMP1Q13316 513 aaPredicted RBP11.26□□□□□ -0.61
SCN10A-201ENST00000449082 LSM14BQ9BX40 385 aaKnown RBP11.26□□□□□ -0.61
SCN10A-201ENST00000449082 AMNQ9BXJ7 453 aa11.26□□□□□ -0.61
SCN10A-201ENST00000449082 PPANQ9NQ55 473 aaKnown RBP11.26□□□□□ -0.61
SCN10A-201ENST00000449082 PCDHA1Q9Y5I3 950 aa11.26□□□□□ -0.61
SCN10A-201ENST00000449082 ADCY9O60503 1353 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms