RNA–Protein interactions for RNA: ENST00000448340.5

HLCS-205, Transcript of holocarboxylase synthetase, humanhuman

TSL 1 (best)

Gene HLCS, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-205ENST00000448340 TNKSO95271 1327 aa20.75■□□□□ 0.91
HLCS-205ENST00000448340 F5H6K3 240 aa20.74■□□□□ 0.91
HLCS-205ENST00000448340 HMGB1P09429 215 aaKnown RBP20.74■□□□□ 0.91
HLCS-205ENST00000448340 PRMT2P55345 433 aa20.74■□□□□ 0.91
HLCS-205ENST00000448340 ANTXR2P58335 489 aa20.74■□□□□ 0.91
HLCS-205ENST00000448340 KLRC3Q07444 240 aa20.74■□□□□ 0.91
HLCS-205ENST00000448340 PABPC4Q13310 644 aaKnown RBP eCLIP20.74■□□□□ 0.91
HLCS-205ENST00000448340 SART3Q15020 963 aaKnown RBP20.74■□□□□ 0.91
HLCS-205ENST00000448340 TREML2Q5T2D2 321 aa20.74■□□□□ 0.91
HLCS-205ENST00000448340 LRRC47Q8N1G4 583 aaKnown RBP20.74■□□□□ 0.91
HLCS-205ENST00000448340 ENAHQ8N8S7 591 aaPredicted RBP20.74■□□□□ 0.91
HLCS-205ENST00000448340 GMCL1P1Q8NEA9 526 aa20.74■□□□□ 0.91
HLCS-205ENST00000448340 TMEM47Q9BQJ4 181 aa20.74■□□□□ 0.91
HLCS-205ENST00000448340 ERICH2A1L162 156 aa20.73■□□□□ 0.91
HLCS-205ENST00000448340 PDHXO00330 501 aa20.73■□□□□ 0.91
HLCS-205ENST00000448340 VCAM1P19320 739 aa20.73■□□□□ 0.91
HLCS-205ENST00000448340 PSMA5P28066 241 aa20.73■□□□□ 0.91
HLCS-205ENST00000448340 HOXA7P31268 230 aaPredicted RBP20.73■□□□□ 0.91
HLCS-205ENST00000448340 ANAPC15P60006 121 aa20.73■□□□□ 0.91
HLCS-205ENST00000448340 KIF22Q14807 665 aa20.73■□□□□ 0.91
HLCS-205ENST00000448340 SEC23AQ15436 765 aa20.73■□□□□ 0.91
HLCS-205ENST00000448340 KIAA1755Q5JYT7 1200 aa20.73■□□□□ 0.91
HLCS-205ENST00000448340 DHX32Q7L7V1 743 aaKnown RBP20.73■□□□□ 0.91
HLCS-205ENST00000448340 CHST3Q7LGC8 479 aa20.73■□□□□ 0.91
HLCS-205ENST00000448340 UBE2Q1Q7Z7E8 422 aa20.73■□□□□ 0.91
HLCS-205ENST00000448340 WDR19Q8NEZ3 1342 aa20.73■□□□□ 0.91
HLCS-205ENST00000448340 ADGRA2Q96PE1 1338 aa20.73■□□□□ 0.91
HLCS-205ENST00000448340 ZSWIM8A7E2V4 1837 aa20.72■□□□□ 0.91
HLCS-205ENST00000448340 IFIT3O14879 490 aaKnown RBP20.72■□□□□ 0.91
HLCS-205ENST00000448340 WDR46O15213 610 aaKnown RBP20.72■□□□□ 0.91
HLCS-205ENST00000448340 PRC1O43663 620 aa20.72■□□□□ 0.91
HLCS-205ENST00000448340 MTFR1Q15390 333 aa20.72■□□□□ 0.91
HLCS-205ENST00000448340 TMEM87BQ96K49 555 aa20.72■□□□□ 0.91
HLCS-205ENST00000448340 TRIM47Q96LD4 638 aa20.72■□□□□ 0.91
HLCS-205ENST00000448340 JAKMIP1Q96N16 626 aaKnown RBP20.72■□□□□ 0.91
HLCS-205ENST00000448340 USP17L15C9J2P7 530 aa20.71■□□□□ 0.91
HLCS-205ENST00000448340 USP17L13C9JLJ4 530 aa20.71■□□□□ 0.91
HLCS-205ENST00000448340 USP17L11C9JVI0 530 aa20.71■□□□□ 0.91
HLCS-205ENST00000448340 USP17L18D6R9N7 530 aa20.71■□□□□ 0.91
HLCS-205ENST00000448340 USP17L22D6RA61 530 aa20.71■□□□□ 0.91
HLCS-205ENST00000448340 USP17L17D6RBQ6 530 aa20.71■□□□□ 0.91
HLCS-205ENST00000448340 USP17L19D6RCP7 530 aa20.71■□□□□ 0.91
HLCS-205ENST00000448340 USP17L20D6RJB6 530 aa20.71■□□□□ 0.91
HLCS-205ENST00000448340 RAD21O60216 631 aa20.71■□□□□ 0.91
HLCS-205ENST00000448340 NDUFB10O96000 172 aa20.71■□□□□ 0.91
HLCS-205ENST00000448340 OSBPP22059 807 aa20.71■□□□□ 0.91
HLCS-205ENST00000448340 EXOSC10Q01780 885 aaKnown RBP20.71■□□□□ 0.91
HLCS-205ENST00000448340 USP17L24Q0WX57 530 aa20.71■□□□□ 0.91
HLCS-205ENST00000448340 COL9A3Q14050 684 aaPredicted RBP20.71■□□□□ 0.91
HLCS-205ENST00000448340 IFIT1BQ5T764 474 aaKnown RBP20.71■□□□□ 0.91
HLCS-205ENST00000448340 SLFN13Q68D06 897 aa20.71■□□□□ 0.91
HLCS-205ENST00000448340 SPICE1Q8N0Z3 855 aa20.71■□□□□ 0.91
HLCS-205ENST00000448340 IGDCC4Q8TDY8 1250 aa20.71■□□□□ 0.91
HLCS-205ENST00000448340 BACH2Q9BYV9 841 aa20.71■□□□□ 0.91
HLCS-205ENST00000448340 TM6SF1Q9BZW5 370 aa20.71■□□□□ 0.91
HLCS-205ENST00000448340 SRRDQ9UH36 339 aa20.71■□□□□ 0.91
HLCS-205ENST00000448340 PNMA3Q9UL41 463 aa20.71■□□□□ 0.91
HLCS-205ENST00000448340 WTAPQ15007 396 aa20.7■□□□□ 0.9
HLCS-205ENST00000448340 TMEM67Q5HYA8 995 aa20.7■□□□□ 0.9
HLCS-205ENST00000448340 BLOC1S2Q6QNY1 142 aa20.7■□□□□ 0.9
HLCS-205ENST00000448340 CATSPERGQ6ZRH7 1159 aa20.7■□□□□ 0.9
HLCS-205ENST00000448340 IL17RAQ96F46 866 aa20.7■□□□□ 0.9
HLCS-205ENST00000448340 PARK7Q99497 189 aaKnown RBP20.7■□□□□ 0.9
HLCS-205ENST00000448340 RPAP3Q9H6T3 665 aaPredicted RBP20.7■□□□□ 0.9
HLCS-205ENST00000448340 KAT14Q9H8E8 782 aa20.7■□□□□ 0.9
HLCS-205ENST00000448340 UPF2Q9HAU5 1272 aaKnown RBP20.7■□□□□ 0.9
HLCS-205ENST00000448340 CPA4Q9UI42 421 aa20.7■□□□□ 0.9
HLCS-205ENST00000448340 CASTP20810 708 aaKnown RBP20.69■□□□□ 0.9
HLCS-205ENST00000448340 PSMC4P43686 418 aa20.69■□□□□ 0.9
HLCS-205ENST00000448340 TMTC2Q8N394 836 aa20.69■□□□□ 0.9
HLCS-205ENST00000448340 PNMA1Q8ND90 353 aa20.69■□□□□ 0.9
HLCS-205ENST00000448340 GMCL1Q96IK5 515 aa20.69■□□□□ 0.9
HLCS-205ENST00000448340 ASCC2Q9H1I8 757 aaPredicted RBP20.69■□□□□ 0.9
HLCS-205ENST00000448340 ZSWIM6Q9HCJ5 1215 aa20.69■□□□□ 0.9
HLCS-205ENST00000448340 SH2B2O14492 632 aaPredicted RBP20.68■□□□□ 0.9
HLCS-205ENST00000448340 LIFRP42702 1097 aa20.68■□□□□ 0.9
HLCS-205ENST00000448340 IRX3P78415 501 aaPredicted RBP20.68■□□□□ 0.9
HLCS-205ENST00000448340 CHRDL2Q6WN34 429 aa20.68■□□□□ 0.9
HLCS-205ENST00000448340 DCAF4Q8WV16 495 aa20.68■□□□□ 0.9
HLCS-205ENST00000448340 C22orf23Q9BZE7 217 aa20.68■□□□□ 0.9
HLCS-205ENST00000448340 PRO3102Q9H379 93 aa20.68■□□□□ 0.9
HLCS-205ENST00000448340 LY9Q9HBG7 655 aa20.68■□□□□ 0.9
HLCS-205ENST00000448340 RBM27Q9P2N5 1060 aaKnown RBP20.68■□□□□ 0.9
HLCS-205ENST00000448340 CYP2C8P10632 490 aa20.67■□□□□ 0.9
HLCS-205ENST00000448340 BMP3P12645 472 aa20.67■□□□□ 0.9
HLCS-205ENST00000448340 RPS6KB1P23443 525 aa20.67■□□□□ 0.9
HLCS-205ENST00000448340 SLC1A4P43007 532 aa20.67■□□□□ 0.9
HLCS-205ENST00000448340 GJA8P48165 433 aa20.67■□□□□ 0.9
HLCS-205ENST00000448340 FAM83BQ5T0W9 1011 aa20.67■□□□□ 0.9
HLCS-205ENST00000448340 RUFY3Q7L099 469 aa20.67■□□□□ 0.9
HLCS-205ENST00000448340 LRRC2Q9BYS8 371 aa20.67■□□□□ 0.9
HLCS-205ENST00000448340 TANGO6Q9C0B7 1094 aa20.67■□□□□ 0.9
HLCS-205ENST00000448340 CYP46A1Q9Y6A2 500 aa20.67■□□□□ 0.9
HLCS-205ENST00000448340 GJB1P08034 283 aa20.66■□□□□ 0.9
HLCS-205ENST00000448340 SNHG28P0DPA3 235 aa20.66■□□□□ 0.9
HLCS-205ENST00000448340 PDHBP11177 359 aa20.66■□□□□ 0.9
HLCS-205ENST00000448340 CPA1P15085 419 aa20.66■□□□□ 0.9
HLCS-205ENST00000448340 GRK4P32298 578 aa20.66■□□□□ 0.9
HLCS-205ENST00000448340 COG2Q14746 738 aa20.66■□□□□ 0.9
HLCS-205ENST00000448340 NUP88Q99567 741 aaPredicted RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms