RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.37■■■□□ 2.29
PMS1-214ENST00000446877 SEMA6BQ9H3T3 888 aa29.37■■■□□ 2.29
PMS1-214ENST00000446877 XPNPEP3Q9NQH7 507 aa29.37■■■□□ 2.29
PMS1-214ENST00000446877 CDK8P49336 464 aa29.36■■■□□ 2.29
PMS1-214ENST00000446877 TLE2Q04725 743 aa29.36■■■□□ 2.29
PMS1-214ENST00000446877 PAG1Q9NWQ8 432 aa29.36■■■□□ 2.29
PMS1-214ENST00000446877 TACC3Q9Y6A5 838 aa29.36■■■□□ 2.29
PMS1-214ENST00000446877 TRIM43BA6NCK2 446 aa29.35■■■□□ 2.29
PMS1-214ENST00000446877 MS4A1P11836 297 aa29.35■■■□□ 2.29
PMS1-214ENST00000446877 ADD2P35612 726 aa29.35■■■□□ 2.29
PMS1-214ENST00000446877 SMAD3P84022 425 aaKnown RBP29.35■■■□□ 2.29
PMS1-214ENST00000446877 C12orf60Q5U649 245 aa29.35■■■□□ 2.29
PMS1-214ENST00000446877 SH3RF1Q7Z6J0 888 aa29.35■■■□□ 2.29
PMS1-214ENST00000446877 RPAP2Q8IXW5 612 aaPredicted RBP29.35■■■□□ 2.29
PMS1-214ENST00000446877 TRIM43Q96BQ3 446 aaPredicted RBP29.35■■■□□ 2.29
PMS1-214ENST00000446877 KANSL2Q9H9L4 492 aa29.35■■■□□ 2.29
PMS1-214ENST00000446877 PHF24Q9UPV7 400 aa29.35■■■□□ 2.29
PMS1-214ENST00000446877 ZNF236Q9UL36 1845 aa29.35■■■□□ 2.29
PMS1-214ENST00000446877 USP17L12C9JPN9 530 aa29.34■■■□□ 2.29
PMS1-214ENST00000446877 USP17L21D6R901 530 aa29.34■■■□□ 2.29
PMS1-214ENST00000446877 PGK2P07205 417 aa29.34■■■□□ 2.29
PMS1-214ENST00000446877 EEF2P13639 858 aaKnown RBP29.34■■■□□ 2.29
PMS1-214ENST00000446877 RIOX2Q8IUF8 465 aa29.34■■■□□ 2.29
PMS1-214ENST00000446877 TINF2Q9BSI4 451 aa29.34■■■□□ 2.29
PMS1-214ENST00000446877 BOLA2Q9H3K6 86 aa29.34■■■□□ 2.29
PMS1-214ENST00000446877 GOPCQ9HD26 462 aa29.34■■■□□ 2.29
PMS1-214ENST00000446877 RAD21O60216 631 aa29.33■■■□□ 2.29
PMS1-214ENST00000446877 RAB11FIP3O75154 756 aa29.33■■■□□ 2.29
PMS1-214ENST00000446877 STAT3P40763 770 aa29.33■■■□□ 2.29
PMS1-214ENST00000446877 ADAMTS5Q9UNA0 930 aa29.33■■■□□ 2.29
PMS1-214ENST00000446877 DIS3Q9Y2L1 958 aaKnown RBP29.33■■■□□ 2.29
PMS1-214ENST00000446877 NAV1Q8NEY1 1877 aa29.33■■■□□ 2.29
PMS1-214ENST00000446877 CYP2D7A0A087X1C5 515 aa29.32■■■□□ 2.28
PMS1-214ENST00000446877 COPB2P35606 906 aa29.32■■■□□ 2.28
PMS1-214ENST00000446877 C16orf86Q6ZW13 317 aa29.32■■■□□ 2.28
PMS1-214ENST00000446877 MAFAQ8NHW3 353 aaPredicted RBP29.32■■■□□ 2.28
PMS1-214ENST00000446877 FBXO28Q9NVF7 368 aa29.32■■■□□ 2.28
PMS1-214ENST00000446877 PGK1P00558 417 aa29.31■■■□□ 2.28
PMS1-214ENST00000446877 CLTBP09497 229 aa29.31■■■□□ 2.28
PMS1-214ENST00000446877 SLFNL1Q499Z3 407 aa29.31■■■□□ 2.28
PMS1-214ENST00000446877 CNPY2Q9Y2B0 182 aa29.31■■■□□ 2.28
PMS1-214ENST00000446877 VWA5AO00534 786 aa29.3■■■□□ 2.28
PMS1-214ENST00000446877 ATP5JP18859 108 aa29.3■■■□□ 2.28
PMS1-214ENST00000446877 ZNF792Q3KQV3 632 aa29.3■■■□□ 2.28
PMS1-214ENST00000446877 PPP1R9AQ9ULJ8 1098 aa29.3■■■□□ 2.28
PMS1-214ENST00000446877 SLC4A4Q9Y6R1 1079 aa29.3■■■□□ 2.28
PMS1-214ENST00000446877 AKR1A1P14550 325 aa29.29■■■□□ 2.28
PMS1-214ENST00000446877 RAG1P15918 1043 aa29.29■■■□□ 2.28
PMS1-214ENST00000446877 RNPC3Q96LT9 517 aaKnown RBP29.29■■■□□ 2.28
PMS1-214ENST00000446877 SMIM22K7EJ46 135 aa29.28■■■□□ 2.28
PMS1-214ENST00000446877 PQBP1O60828 265 aaKnown RBP29.28■■■□□ 2.28
PMS1-214ENST00000446877 TAL1P17542 331 aaPredicted RBP29.28■■■□□ 2.28
PMS1-214ENST00000446877 UBE3CQ15386 1083 aa29.28■■■□□ 2.28
PMS1-214ENST00000446877 FAM83BQ5T0W9 1011 aa29.28■■■□□ 2.28
PMS1-214ENST00000446877 ZSCAN25Q6NSZ9 544 aa29.28■■■□□ 2.28
PMS1-214ENST00000446877 HAUS7Q99871 368 aa29.28■■■□□ 2.28
PMS1-214ENST00000446877 TMEM39AQ9NV64 488 aa29.28■■■□□ 2.28
PMS1-214ENST00000446877 A0A0G2JMZ2 1700 aa29.28■■■□□ 2.28
PMS1-214ENST00000446877 RLFQ13129 1914 aa29.28■■■□□ 2.28
PMS1-214ENST00000446877 MYLIPQ8WY64 445 aa29.27■■■□□ 2.28
PMS1-214ENST00000446877 A0A1W2PQ45 241 aaPredicted RBP29.26■■■□□ 2.27
PMS1-214ENST00000446877 A0A1W2PQY0 241 aa29.26■■■□□ 2.27
PMS1-214ENST00000446877 KIAA0355O15063 1070 aa29.26■■■□□ 2.27
PMS1-214ENST00000446877 ZNF865P0CJ78 1059 aaPredicted RBP29.26■■■□□ 2.27
PMS1-214ENST00000446877 CTR9Q6PD62 1173 aa29.26■■■□□ 2.27
PMS1-214ENST00000446877 TTYH1Q9H313 450 aaPredicted RBP29.26■■■□□ 2.27
PMS1-214ENST00000446877 ZNF214Q9UL59 606 aaPredicted RBP29.26■■■□□ 2.27
PMS1-214ENST00000446877 LTBP2Q14767 1821 aa29.25■■■□□ 2.27
PMS1-214ENST00000446877 EYSQ5T1H1 3165 aa29.25■■■□□ 2.27
PMS1-214ENST00000446877 FOSL2P15408 326 aa29.25■■■□□ 2.27
PMS1-214ENST00000446877 ITGB8P26012 769 aa29.25■■■□□ 2.27
PMS1-214ENST00000446877 SIRT2Q8IXJ6 389 aa29.25■■■□□ 2.27
PMS1-214ENST00000446877 DDX11Q96FC9 970 aa29.25■■■□□ 2.27
PMS1-214ENST00000446877 TSEN34Q9BSV6 310 aaKnown RBP29.25■■■□□ 2.27
PMS1-214ENST00000446877 DDX19BQ9UMR2 479 aa29.25■■■□□ 2.27
PMS1-214ENST00000446877 VCANP13611 3396 aa29.25■■■□□ 2.27
PMS1-214ENST00000446877 DCDC2CA8MYV0 355 aa29.24■■■□□ 2.27
PMS1-214ENST00000446877 FPGSQ05932 587 aa29.24■■■□□ 2.27
PMS1-214ENST00000446877 MSL3Q8N5Y2 521 aaKnown RBP29.24■■■□□ 2.27
PMS1-214ENST00000446877 NUP133Q8WUM0 1156 aa29.24■■■□□ 2.27
PMS1-214ENST00000446877 TEX13BQ9BXU2 312 aa29.24■■■□□ 2.27
PMS1-214ENST00000446877 FAM184BQ9ULE4 1060 aa29.24■■■□□ 2.27
PMS1-214ENST00000446877 TMEM265A0A087WTH1 108 aa29.23■■■□□ 2.27
PMS1-214ENST00000446877 REPS2Q8NFH8 660 aa29.23■■■□□ 2.27
PMS1-214ENST00000446877 TOX2Q96NM4 488 aa29.23■■■□□ 2.27
PMS1-214ENST00000446877 SLF1Q9BQI6 1058 aa29.23■■■□□ 2.27
PMS1-214ENST00000446877 STARD7Q9NQZ5 370 aa29.23■■■□□ 2.27
PMS1-214ENST00000446877 ZBTB40Q9NUA8 1239 aa29.23■■■□□ 2.27
PMS1-214ENST00000446877 ARPP21Q9UBL0 812 aaPredicted RBP29.23■■■□□ 2.27
PMS1-214ENST00000446877 ROBO3Q96MS0 1386 aa29.23■■■□□ 2.27
PMS1-214ENST00000446877 ZBED9Q6R2W3 1325 aa29.22■■■□□ 2.27
PMS1-214ENST00000446877 ACLYP53396 1101 aa29.22■■■□□ 2.27
PMS1-214ENST00000446877 EPHB4P54760 987 aa29.22■■■□□ 2.27
PMS1-214ENST00000446877 LENG1Q96BZ8 264 aaPredicted RBP29.22■■■□□ 2.27
PMS1-214ENST00000446877 CHMP4BQ9H444 224 aaKnown RBP29.22■■■□□ 2.27
PMS1-214ENST00000446877 MKNK2Q9HBH9 465 aa29.22■■■□□ 2.27
PMS1-214ENST00000446877 CTDP1Q9Y5B0 961 aaPredicted RBP29.22■■■□□ 2.27
PMS1-214ENST00000446877 PRUNE2Q8WUY3 3088 aa29.22■■■□□ 2.27
PMS1-214ENST00000446877 ADAMTS4O75173 837 aa29.21■■■□□ 2.27
PMS1-214ENST00000446877 CHGBP05060 677 aa29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms