RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 SNED1Q8TER0 1413 aa20.26■□□□□ 0.83
CLDN9-201ENST00000445369 TSPY3P0CV98 308 aa20.26■□□□□ 0.83
CLDN9-201ENST00000445369 TSPY8P0CW00 308 aa20.26■□□□□ 0.83
CLDN9-201ENST00000445369 GNAQP50148 359 aa20.26■□□□□ 0.83
CLDN9-201ENST00000445369 ARL6IP4Q66PJ3 421 aaKnown RBP20.26■□□□□ 0.83
CLDN9-201ENST00000445369 SPECC1LQ69YQ0 1117 aa20.26■□□□□ 0.83
CLDN9-201ENST00000445369 RPGRQ92834 1020 aaKnown RBP20.26■□□□□ 0.83
CLDN9-201ENST00000445369 GPKOWQ92917 476 aaPredicted RBP eCLIP20.26■□□□□ 0.83
CLDN9-201ENST00000445369 PYM1Q9BRP8 204 aaKnown RBP20.26■□□□□ 0.83
CLDN9-201ENST00000445369 SYNRGQ9UMZ2 1314 aa20.26■□□□□ 0.83
CLDN9-201ENST00000445369 FOCADQ5VW36 1801 aa20.25■□□□□ 0.83
CLDN9-201ENST00000445369 M0R2N6 131 aa20.25■□□□□ 0.83
CLDN9-201ENST00000445369 SLC35G1Q2M3R5 365 aa20.25■□□□□ 0.83
CLDN9-201ENST00000445369 SPATA1Q5VX52 437 aa20.25■□□□□ 0.83
CLDN9-201ENST00000445369 PDXDC2PQ6P474 469 aa20.25■□□□□ 0.83
CLDN9-201ENST00000445369 CERS3Q8IU89 383 aa20.25■□□□□ 0.83
CLDN9-201ENST00000445369 SLC44A5Q8NCS7 719 aa20.25■□□□□ 0.83
CLDN9-201ENST00000445369 ARID3AQ99856 593 aa20.25■□□□□ 0.83
CLDN9-201ENST00000445369 MYH1P12882 1939 aa20.25■□□□□ 0.83
CLDN9-201ENST00000445369 A0A1B0GTH6 734 aa20.25■□□□□ 0.83
CLDN9-201ENST00000445369 NAA30Q147X3 362 aaPredicted RBP20.25■□□□□ 0.83
CLDN9-201ENST00000445369 NR1I3Q14994 352 aa20.25■□□□□ 0.83
CLDN9-201ENST00000445369 TYW1BQ6NUM6 668 aa20.25■□□□□ 0.83
CLDN9-201ENST00000445369 APTXQ7Z2E3 356 aaKnown RBP20.25■□□□□ 0.83
CLDN9-201ENST00000445369 C4orf32Q8N8J7 132 aa20.25■□□□□ 0.83
CLDN9-201ENST00000445369 IQUBQ8NA54 791 aa20.25■□□□□ 0.83
CLDN9-201ENST00000445369 L2HGDHQ9H9P8 463 aa20.25■□□□□ 0.83
CLDN9-201ENST00000445369 CD209Q9NNX6 404 aa20.25■□□□□ 0.83
CLDN9-201ENST00000445369 ZNF215Q9UL58 517 aaPredicted RBP20.25■□□□□ 0.83
CLDN9-201ENST00000445369 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.24■□□□□ 0.83
CLDN9-201ENST00000445369 PPP1R3GB7ZBB8 358 aa20.24■□□□□ 0.83
CLDN9-201ENST00000445369 ARHGAP6O43182 974 aa20.24■□□□□ 0.83
CLDN9-201ENST00000445369 UFL1O94874 794 aa20.24■□□□□ 0.83
CLDN9-201ENST00000445369 IL1R1P14778 569 aa20.24■□□□□ 0.83
CLDN9-201ENST00000445369 RASA1P20936 1047 aa20.24■□□□□ 0.83
CLDN9-201ENST00000445369 MAPKAPK5Q8IW41 473 aa20.24■□□□□ 0.83
CLDN9-201ENST00000445369 ZNF444Q8N0Y2 327 aaPredicted RBP20.24■□□□□ 0.83
CLDN9-201ENST00000445369 DAGLBQ8NCG7 672 aa20.24■□□□□ 0.83
CLDN9-201ENST00000445369 LRRC37AA6NMS7 1700 aa20.24■□□□□ 0.83
CLDN9-201ENST00000445369 LTBP1Q14766 1721 aa20.24■□□□□ 0.83
CLDN9-201ENST00000445369 CYTH3O43739 400 aa20.23■□□□□ 0.83
CLDN9-201ENST00000445369 ATP2B4P23634 1241 aa20.23■□□□□ 0.83
CLDN9-201ENST00000445369 BTDP43251 543 aa20.23■□□□□ 0.83
CLDN9-201ENST00000445369 PPP4R3BQ5MIZ7 849 aa20.23■□□□□ 0.83
CLDN9-201ENST00000445369 CDKAL1Q5VV42 579 aa20.23■□□□□ 0.83
CLDN9-201ENST00000445369 SYT10Q6XYQ8 523 aa20.23■□□□□ 0.83
CLDN9-201ENST00000445369 TC2NQ8N9U0 490 aa20.23■□□□□ 0.83
CLDN9-201ENST00000445369 TRPC5Q9UL62 973 aaPredicted RBP20.23■□□□□ 0.83
CLDN9-201ENST00000445369 PALM3A6NDB9 673 aaPredicted RBP20.23■□□□□ 0.83
CLDN9-201ENST00000445369 LONP1P36776 959 aaKnown RBP20.23■□□□□ 0.83
CLDN9-201ENST00000445369 WWC2Q6AWC2 1192 aa20.23■□□□□ 0.83
CLDN9-201ENST00000445369 KLHL10Q6JEL2 608 aa20.23■□□□□ 0.83
CLDN9-201ENST00000445369 REXO1L1PQ8IX06 675 aa20.23■□□□□ 0.83
CLDN9-201ENST00000445369 ERO1AQ96HE7 468 aa20.23■□□□□ 0.83
CLDN9-201ENST00000445369 TMEM47Q9BQJ4 181 aa20.23■□□□□ 0.83
CLDN9-201ENST00000445369 SAP30BPQ9UHR5 308 aaKnown RBP20.23■□□□□ 0.83
CLDN9-201ENST00000445369 GPR75-ASB3A0A0A6YYF3 556 aa20.22■□□□□ 0.83
CLDN9-201ENST00000445369 GYS1P13807 737 aa20.22■□□□□ 0.83
CLDN9-201ENST00000445369 SEPT12Q8IYM1 358 aa20.22■□□□□ 0.83
CLDN9-201ENST00000445369 SMYD4Q8IYR2 804 aaPredicted RBP20.22■□□□□ 0.83
CLDN9-201ENST00000445369 CCDC148Q8NFR7 591 aa20.22■□□□□ 0.83
CLDN9-201ENST00000445369 RASGRP4Q8TDF6 673 aa20.22■□□□□ 0.83
CLDN9-201ENST00000445369 MTRQ99707 1265 aa20.22■□□□□ 0.83
CLDN9-201ENST00000445369 GGA1Q9UJY5 639 aa20.22■□□□□ 0.83
CLDN9-201ENST00000445369 GTPBP6O43824 516 aaPredicted RBP20.22■□□□□ 0.83
CLDN9-201ENST00000445369 SLU7O95391 586 aaKnown RBP20.22■□□□□ 0.83
CLDN9-201ENST00000445369 STX17P56962 302 aa20.22■□□□□ 0.83
CLDN9-201ENST00000445369 ETF1P62495 437 aaKnown RBP20.22■□□□□ 0.83
CLDN9-201ENST00000445369 ST5P78524 1137 aa20.22■□□□□ 0.83
CLDN9-201ENST00000445369 GALNT17Q6IS24 598 aa20.22■□□□□ 0.83
CLDN9-201ENST00000445369 C16orf86Q6ZW13 317 aa20.22■□□□□ 0.83
CLDN9-201ENST00000445369 STAMQ92783 540 aa20.22■□□□□ 0.83
CLDN9-201ENST00000445369 BAG1Q99933 345 aaPredicted RBP20.22■□□□□ 0.83
CLDN9-201ENST00000445369 PHLPP2Q6ZVD8 1323 aa20.21■□□□□ 0.83
CLDN9-201ENST00000445369 STXBP3O00186 592 aa20.21■□□□□ 0.83
CLDN9-201ENST00000445369 ONECUT3O60422 494 aaPredicted RBP20.21■□□□□ 0.83
CLDN9-201ENST00000445369 STX10O60499 249 aa20.21■□□□□ 0.83
CLDN9-201ENST00000445369 TRIM65Q6PJ69 517 aa20.21■□□□□ 0.83
CLDN9-201ENST00000445369 FAM177A1Q8N128 213 aaPredicted RBP20.21■□□□□ 0.83
CLDN9-201ENST00000445369 RBM17Q96I25 401 aaKnown RBP20.21■□□□□ 0.83
CLDN9-201ENST00000445369 BCL11BQ9C0K0 894 aaPredicted RBP20.21■□□□□ 0.83
CLDN9-201ENST00000445369 ZNF287Q9HBT7 754 aa20.21■□□□□ 0.83
CLDN9-201ENST00000445369 BARHL2Q9NY43 387 aa20.21■□□□□ 0.83
CLDN9-201ENST00000445369 PCDHA6Q9UN73 950 aa20.21■□□□□ 0.83
CLDN9-201ENST00000445369 STX8Q9UNK0 236 aa20.21■□□□□ 0.83
CLDN9-201ENST00000445369 PCDHA8Q9Y5H6 950 aa20.21■□□□□ 0.83
CLDN9-201ENST00000445369 SERPINB2P05120 415 aa20.2■□□□□ 0.82
CLDN9-201ENST00000445369 CCDC93Q567U6 631 aa20.2■□□□□ 0.82
CLDN9-201ENST00000445369 LZTS2Q9BRK4 669 aa20.2■□□□□ 0.82
CLDN9-201ENST00000445369 BLZF1Q9H2G9 400 aa20.2■□□□□ 0.82
CLDN9-201ENST00000445369 FLT1P17948 1338 aa20.2■□□□□ 0.82
CLDN9-201ENST00000445369 CCDC194A0A1B0GVG4 234 aa20.2■□□□□ 0.82
CLDN9-201ENST00000445369 ZSCAN12O43309 604 aa20.2■□□□□ 0.82
CLDN9-201ENST00000445369 CDK8P49336 464 aa20.2■□□□□ 0.82
CLDN9-201ENST00000445369 HOMER1Q86YM7 354 aa20.2■□□□□ 0.82
CLDN9-201ENST00000445369 TEX11Q8IYF3 940 aa20.2■□□□□ 0.82
CLDN9-201ENST00000445369 PODXL2Q9NZ53 605 aa20.2■□□□□ 0.82
CLDN9-201ENST00000445369 CGNQ9P2M7 1197 aaKnown RBP20.2■□□□□ 0.82
CLDN9-201ENST00000445369 ADD3Q9UEY8 706 aaKnown RBP20.2■□□□□ 0.82
CLDN9-201ENST00000445369 PBX1P40424 430 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms