RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 ZNF76P36508 570 aa5.06□□□□□ -1.6
HMGB3P11-201ENST00000440127 NMIQ13287 307 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P11-201ENST00000440127 SNX17Q15036 470 aa5.06□□□□□ -1.6
HMGB3P11-201ENST00000440127 ARSHQ5FYA8 562 aa5.06□□□□□ -1.6
HMGB3P11-201ENST00000440127 FBXL19Q6PCT2 694 aa5.06□□□□□ -1.6
HMGB3P11-201ENST00000440127 KIAA0825Q8IV33 1275 aa5.06□□□□□ -1.6
HMGB3P11-201ENST00000440127 TMEM87AQ8NBN3 555 aa5.06□□□□□ -1.6
HMGB3P11-201ENST00000440127 ZSCAN18Q8TBC5 510 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P11-201ENST00000440127 SYTL5Q8TDW5 730 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P11-201ENST00000440127 ZNF296Q8WUU4 475 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P11-201ENST00000440127 LIN37Q96GY3 246 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P11-201ENST00000440127 SLC26A8Q96RN1 970 aa5.06□□□□□ -1.6
HMGB3P11-201ENST00000440127 KIF2CQ99661 725 aa5.06□□□□□ -1.6
HMGB3P11-201ENST00000440127 EHMT1Q9H9B1 1298 aa5.06□□□□□ -1.6
HMGB3P11-201ENST00000440127 CUX1P39880 1505 aa5.06□□□□□ -1.6
HMGB3P11-201ENST00000440127 RAPGEF2Q9Y4G8 1499 aa5.06□□□□□ -1.6
HMGB3P11-201ENST00000440127 KIF27Q86VH2 1401 aa5.06□□□□□ -1.6
HMGB3P11-201ENST00000440127 DNAJC25-GNG10A0A024R161 153 aa5.05□□□□□ -1.6
HMGB3P11-201ENST00000440127 GREM1O60565 184 aa5.05□□□□□ -1.6
HMGB3P11-201ENST00000440127 GARTP22102 1010 aa5.05□□□□□ -1.6
HMGB3P11-201ENST00000440127 MCM4P33991 863 aa5.05□□□□□ -1.6
HMGB3P11-201ENST00000440127 PCBP3P57721 371 aaKnown RBP5.05□□□□□ -1.6
HMGB3P11-201ENST00000440127 TAGLNQ01995 201 aaKnown RBP5.05□□□□□ -1.6
HMGB3P11-201ENST00000440127 NR0B2Q15466 257 aa5.05□□□□□ -1.6
HMGB3P11-201ENST00000440127 CDCP2Q5VXM1 449 aa5.05□□□□□ -1.6
HMGB3P11-201ENST00000440127 NLRC3Q7RTR2 1065 aa5.05□□□□□ -1.6
HMGB3P11-201ENST00000440127 ANKLE2Q86XL3 938 aa5.05□□□□□ -1.6
HMGB3P11-201ENST00000440127 IRF2BP1Q8IU81 584 aa5.05□□□□□ -1.6
HMGB3P11-201ENST00000440127 ZNF655Q8N720 491 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P11-201ENST00000440127 DAGLBQ8NCG7 672 aa5.05□□□□□ -1.6
HMGB3P11-201ENST00000440127 BAHD1Q8TBE0 780 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P11-201ENST00000440127 NKD1Q969G9 470 aa5.05□□□□□ -1.6
HMGB3P11-201ENST00000440127 DHRS1Q96LJ7 313 aa5.05□□□□□ -1.6
HMGB3P11-201ENST00000440127 NT5C1AQ9BXI3 368 aa5.05□□□□□ -1.6
HMGB3P11-201ENST00000440127 NSUN3Q9H649 340 aaKnown RBP5.05□□□□□ -1.6
HMGB3P11-201ENST00000440127 BRMS1Q9HCU9 246 aa5.05□□□□□ -1.6
HMGB3P11-201ENST00000440127 DCP1AQ9NPI6 582 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P11-201ENST00000440127 IGSF5Q9NSI5 407 aa5.05□□□□□ -1.6
HMGB3P11-201ENST00000440127 C19orf73Q9NVV2 129 aa5.05□□□□□ -1.6
HMGB3P11-201ENST00000440127 PCDHA11Q9Y5I1 949 aa5.05□□□□□ -1.6
HMGB3P11-201ENST00000440127 CC2D2AQ9P2K1 1620 aa5.05□□□□□ -1.6
HMGB3P11-201ENST00000440127 SLC22A31A6NKX4 558 aa5.04□□□□□ -1.6
HMGB3P11-201ENST00000440127 TMEM253P0C7T8 217 aa5.04□□□□□ -1.6
HMGB3P11-201ENST00000440127 SEZ6Q53EL9 994 aa5.04□□□□□ -1.6
HMGB3P11-201ENST00000440127 RALGPS1Q5JS13 557 aa5.04□□□□□ -1.6
HMGB3P11-201ENST00000440127 FYB2Q5VWT5 728 aa5.04□□□□□ -1.6
HMGB3P11-201ENST00000440127 OLFML2BQ68BL8 750 aa5.04□□□□□ -1.6
HMGB3P11-201ENST00000440127 OVOS1Q6IE37 1185 aa5.04□□□□□ -1.6
HMGB3P11-201ENST00000440127 SYDE1Q6ZW31 735 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P11-201ENST00000440127 FBXO27Q8NI29 283 aa5.04□□□□□ -1.6
HMGB3P11-201ENST00000440127 SPATA32Q96LK8 384 aa5.04□□□□□ -1.6
HMGB3P11-201ENST00000440127 SPON2Q9BUD6 331 aa5.04□□□□□ -1.6
HMGB3P11-201ENST00000440127 CNNM2Q9H8M5 875 aa5.04□□□□□ -1.6
HMGB3P11-201ENST00000440127 COPRSQ9NQ92 184 aa5.04□□□□□ -1.6
HMGB3P11-201ENST00000440127 PRR13Q9NZ81 148 aa5.04□□□□□ -1.6
HMGB3P11-201ENST00000440127 PRXQ9BXM0 1461 aa5.04□□□□□ -1.6
HMGB3P11-201ENST00000440127 ERICH3Q5RHP9 1530 aa5.03□□□□□ -1.6
HMGB3P11-201ENST00000440127 TTBK1Q5TCY1 1321 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P11-201ENST00000440127 TCAF2A6NFQ2 919 aa5.03□□□□□ -1.6
HMGB3P11-201ENST00000440127 MEIS3P2A8K0S8 358 aa5.03□□□□□ -1.6
HMGB3P11-201ENST00000440127 ZGLP1P0C6A0 271 aa5.03□□□□□ -1.6
HMGB3P11-201ENST00000440127 ZNF16P17020 682 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P11-201ENST00000440127 MESP2Q0VG99 397 aa5.03□□□□□ -1.6
HMGB3P11-201ENST00000440127 GK5Q6ZS86 529 aa5.03□□□□□ -1.6
HMGB3P11-201ENST00000440127 SMARCC1Q92922 1105 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P11-201ENST00000440127 DIRC2Q96SL1 478 aa5.03□□□□□ -1.6
HMGB3P11-201ENST00000440127 ADAMTS10Q9H324 1103 aa5.03□□□□□ -1.6
HMGB3P11-201ENST00000440127 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.03□□□□□ -1.6
HMGB3P11-201ENST00000440127 VPS8Q8N3P4 1428 aa5.03□□□□□ -1.6
HMGB3P11-201ENST00000440127 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P11-201ENST00000440127 KIR2DL1P43626 348 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P11-201ENST00000440127 KIR2DL2P43627 348 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P11-201ENST00000440127 COL9A2Q14055 689 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P11-201ENST00000440127 SLC14A2Q15849 920 aa5.02□□□□□ -1.61
HMGB3P11-201ENST00000440127 ZNF124Q15973 351 aa5.02□□□□□ -1.61
HMGB3P11-201ENST00000440127 NBPF12Q5TAG4 269 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P11-201ENST00000440127 PRR23BQ6ZRT6 265 aa5.02□□□□□ -1.61
HMGB3P11-201ENST00000440127 USP48Q86UV5 1035 aa5.02□□□□□ -1.61
HMGB3P11-201ENST00000440127 SLITRK4Q8IW52 837 aa5.02□□□□□ -1.61
HMGB3P11-201ENST00000440127 FERD3LQ96RJ6 166 aa5.02□□□□□ -1.61
HMGB3P11-201ENST00000440127 MKRN2Q9H000 416 aaKnown RBP5.02□□□□□ -1.61
HMGB3P11-201ENST00000440127 KIAA1522Q9P206 1035 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P11-201ENST00000440127 ADAMTS1Q9UHI8 967 aa5.02□□□□□ -1.61
HMGB3P11-201ENST00000440127 GPR160Q9UJ42 338 aa5.02□□□□□ -1.61
HMGB3P11-201ENST00000440127 ZMYM5Q9UJ78 669 aa5.02□□□□□ -1.61
HMGB3P11-201ENST00000440127 PCDHB12Q9Y5F1 795 aa5.02□□□□□ -1.61
HMGB3P11-201ENST00000440127 TNFRSF10CO14798 259 aa5.01□□□□□ -1.61
HMGB3P11-201ENST00000440127 SIGLEC6O43699 453 aa5.01□□□□□ -1.61
HMGB3P11-201ENST00000440127 SEMA7AO75326 666 aa5.01□□□□□ -1.61
HMGB3P11-201ENST00000440127 UBOX5O94941 541 aa5.01□□□□□ -1.61
HMGB3P11-201ENST00000440127 GLDCP23378 1020 aa5.01□□□□□ -1.61
HMGB3P11-201ENST00000440127 TEKQ02763 1124 aa5.01□□□□□ -1.61
HMGB3P11-201ENST00000440127 TMEM62Q0P6H9 643 aa5.01□□□□□ -1.61
HMGB3P11-201ENST00000440127 NBPF9Q3BBW0 867 aa5.01□□□□□ -1.61
HMGB3P11-201ENST00000440127 BBS9Q3SYG4 887 aa5.01□□□□□ -1.61
HMGB3P11-201ENST00000440127 WAPLQ7Z5K2 1190 aa5.01□□□□□ -1.61
HMGB3P11-201ENST00000440127 LINC00116Q8NCU8 138 aa5.01□□□□□ -1.61
HMGB3P11-201ENST00000440127 RNF34Q969K3 372 aa5.01□□□□□ -1.61
HMGB3P11-201ENST00000440127 ATG4CQ96DT6 458 aa5.01□□□□□ -1.61
HMGB3P11-201ENST00000440127 HDAC8Q9BY41 377 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms