RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 PRPF3O43395 683 aaKnown RBP17.25■□□□□ 0.35
CDC42EP4-202ENST00000439510 PPARAQ07869 468 aa17.25■□□□□ 0.35
CDC42EP4-202ENST00000439510 TRIM14Q14142 442 aa17.25■□□□□ 0.35
CDC42EP4-202ENST00000439510 CYP26C1Q6V0L0 522 aa17.25■□□□□ 0.35
CDC42EP4-202ENST00000439510 TNFRSF25Q93038 417 aa17.25■□□□□ 0.35
CDC42EP4-202ENST00000439510 ANAPC4Q9UJX5 808 aa17.25■□□□□ 0.35
CDC42EP4-202ENST00000439510 CTNND2Q9UQB3 1225 aa17.25■□□□□ 0.35
CDC42EP4-202ENST00000439510 TNKSO95271 1327 aa17.25■□□□□ 0.35
CDC42EP4-202ENST00000439510 CTAGE15A4D2H0 777 aa17.25■□□□□ 0.35
CDC42EP4-202ENST00000439510 CTAGE8P0CG41 777 aa17.25■□□□□ 0.35
CDC42EP4-202ENST00000439510 ACTN2P35609 894 aa17.25■□□□□ 0.35
CDC42EP4-202ENST00000439510 AMPD2Q01433 879 aa17.25■□□□□ 0.35
CDC42EP4-202ENST00000439510 AKAP17AQ02040 695 aaKnown RBP17.25■□□□□ 0.35
CDC42EP4-202ENST00000439510 E2F4Q16254 413 aa17.25■□□□□ 0.35
CDC42EP4-202ENST00000439510 CTAGE6Q86UF2 777 aa17.25■□□□□ 0.35
CDC42EP4-202ENST00000439510 CTAGE4Q8IX94 777 aa17.25■□□□□ 0.35
CDC42EP4-202ENST00000439510 GBP3Q9H0R5 595 aa17.25■□□□□ 0.35
CDC42EP4-202ENST00000439510 RWDD2AQ9UIY3 292 aa17.25■□□□□ 0.35
CDC42EP4-202ENST00000439510 XDHP47989 1333 aa17.24■□□□□ 0.35
CDC42EP4-202ENST00000439510 WNT7AO00755 349 aa17.24■□□□□ 0.35
CDC42EP4-202ENST00000439510 ABL1P00519 1130 aa17.24■□□□□ 0.35
CDC42EP4-202ENST00000439510 VSNL1P62760 191 aa17.24■□□□□ 0.35
CDC42EP4-202ENST00000439510 SPAG1Q07617 926 aa17.24■□□□□ 0.35
CDC42EP4-202ENST00000439510 TRERF1Q96PN7 1200 aa17.24■□□□□ 0.35
CDC42EP4-202ENST00000439510 CCT6AP40227 531 aaKnown RBP17.24■□□□□ 0.35
CDC42EP4-202ENST00000439510 SECISBP2LQ93073 1101 aaKnown RBP17.24■□□□□ 0.35
CDC42EP4-202ENST00000439510 VPS18Q9P253 973 aa17.24■□□□□ 0.35
CDC42EP4-202ENST00000439510 DUOX1Q9NRD9 1551 aa17.24■□□□□ 0.35
CDC42EP4-202ENST00000439510 N4BP3O15049 544 aa17.23■□□□□ 0.35
CDC42EP4-202ENST00000439510 ATP2C1P98194 919 aaPredicted RBP17.23■□□□□ 0.35
CDC42EP4-202ENST00000439510 ESR2Q92731 530 aa17.23■□□□□ 0.35
CDC42EP4-202ENST00000439510 BRWD3Q6RI45 1802 aa17.23■□□□□ 0.35
CDC42EP4-202ENST00000439510 RNF225M0QZC1 329 aaPredicted RBP17.23■□□□□ 0.35
CDC42EP4-202ENST00000439510 TFRCP02786 760 aaKnown RBP17.23■□□□□ 0.35
CDC42EP4-202ENST00000439510 COPB1P53618 953 aaKnown RBP17.23■□□□□ 0.35
CDC42EP4-202ENST00000439510 NPY5RQ15761 445 aa17.23■□□□□ 0.35
CDC42EP4-202ENST00000439510 WDR93Q6P2C0 686 aa17.23■□□□□ 0.35
CDC42EP4-202ENST00000439510 RPS6KA5O75582 802 aa17.22■□□□□ 0.35
CDC42EP4-202ENST00000439510 RHOXF2BP0C7M4 288 aa17.22■□□□□ 0.35
CDC42EP4-202ENST00000439510 CASP8Q14790 479 aa17.22■□□□□ 0.35
CDC42EP4-202ENST00000439510 PDXDC2PQ6P474 469 aa17.22■□□□□ 0.35
CDC42EP4-202ENST00000439510 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.22■□□□□ 0.35
CDC42EP4-202ENST00000439510 RHOXF2Q9BQY4 288 aa17.22■□□□□ 0.35
CDC42EP4-202ENST00000439510 SUGCTQ9HAC7 445 aa17.22■□□□□ 0.35
CDC42EP4-202ENST00000439510 ERVV-1B6SEH8 477 aa17.22■□□□□ 0.35
CDC42EP4-202ENST00000439510 CYP19A1P11511 503 aaPredicted RBP17.22■□□□□ 0.35
CDC42EP4-202ENST00000439510 ATP6V1AP38606 617 aa17.22■□□□□ 0.35
CDC42EP4-202ENST00000439510 TCP11X2Q5H9J9 407 aa17.22■□□□□ 0.35
CDC42EP4-202ENST00000439510 TTC38Q5R3I4 469 aa17.22■□□□□ 0.35
CDC42EP4-202ENST00000439510 ENAHQ8N8S7 591 aaPredicted RBP17.22■□□□□ 0.35
CDC42EP4-202ENST00000439510 PYM1Q9BRP8 204 aaKnown RBP17.22■□□□□ 0.35
CDC42EP4-202ENST00000439510 MYO6Q9UM54 1294 aa17.22■□□□□ 0.35
CDC42EP4-202ENST00000439510 N4BP1O75113 896 aaKnown RBP17.22■□□□□ 0.35
CDC42EP4-202ENST00000439510 BRMS1Q9HCU9 246 aa17.22■□□□□ 0.35
CDC42EP4-202ENST00000439510 RBM28Q9NW13 759 aaKnown RBP17.22■□□□□ 0.35
CDC42EP4-202ENST00000439510 SNAP23O00161 211 aa17.21■□□□□ 0.35
CDC42EP4-202ENST00000439510 PRDM1O75626 825 aa17.21■□□□□ 0.35
CDC42EP4-202ENST00000439510 PAK1Q13153 545 aa17.21■□□□□ 0.35
CDC42EP4-202ENST00000439510 MIGA1Q8NAN2 632 aa17.21■□□□□ 0.35
CDC42EP4-202ENST00000439510 FAM71BQ8TC56 605 aa17.21■□□□□ 0.35
CDC42EP4-202ENST00000439510 NUP88Q99567 741 aaPredicted RBP17.21■□□□□ 0.35
CDC42EP4-202ENST00000439510 GTPBP6O43824 516 aaPredicted RBP17.21■□□□□ 0.35
CDC42EP4-202ENST00000439510 PTGDRQ13258 359 aa17.21■□□□□ 0.35
CDC42EP4-202ENST00000439510 ZNF174Q15697 407 aa17.21■□□□□ 0.35
CDC42EP4-202ENST00000439510 RRAGBQ5VZM2 374 aa17.21■□□□□ 0.35
CDC42EP4-202ENST00000439510 ZNF34Q8IZ26 560 aa17.21■□□□□ 0.35
CDC42EP4-202ENST00000439510 NOA1Q8NC60 698 aaKnown RBP17.21■□□□□ 0.35
CDC42EP4-202ENST00000439510 ZSCAN10Q96SZ4 725 aaPredicted RBP17.21■□□□□ 0.35
CDC42EP4-202ENST00000439510 FAN1Q9Y2M0 1017 aa17.21■□□□□ 0.35
CDC42EP4-202ENST00000439510 LOC102724428A0A0B4J2F2 783 aa17.2■□□□□ 0.34
CDC42EP4-202ENST00000439510 KCNJ18B7U540 433 aa17.2■□□□□ 0.34
CDC42EP4-202ENST00000439510 CDC25AP30304 524 aa17.2■□□□□ 0.34
CDC42EP4-202ENST00000439510 SIK1P57059 783 aa17.2■□□□□ 0.34
CDC42EP4-202ENST00000439510 KCNJ12Q14500 433 aa17.2■□□□□ 0.34
CDC42EP4-202ENST00000439510 ANKRD20A12PQ8NF67 263 aa17.2■□□□□ 0.34
CDC42EP4-202ENST00000439510 MTRQ99707 1265 aa17.2■□□□□ 0.34
CDC42EP4-202ENST00000439510 VPS16Q9H269 839 aa17.2■□□□□ 0.34
CDC42EP4-202ENST00000439510 ZBTB1Q9Y2K1 713 aa17.2■□□□□ 0.34
CDC42EP4-202ENST00000439510 V9GY48 417 aaPredicted RBP17.2■□□□□ 0.34
CDC42EP4-202ENST00000439510 PLEKHA8P1O95397 391 aa17.2■□□□□ 0.34
CDC42EP4-202ENST00000439510 IVLP07476 585 aa17.2■□□□□ 0.34
CDC42EP4-202ENST00000439510 KRT9P35527 623 aa17.2■□□□□ 0.34
CDC42EP4-202ENST00000439510 ZNF658Q5TYW1 1059 aaPredicted RBP17.2■□□□□ 0.34
CDC42EP4-202ENST00000439510 LEKR1Q6ZMV7 388 aa17.2■□□□□ 0.34
CDC42EP4-202ENST00000439510 SLF1Q9BQI6 1058 aa17.2■□□□□ 0.34
CDC42EP4-202ENST00000439510 MED4Q9NPJ6 270 aa17.2■□□□□ 0.34
CDC42EP4-202ENST00000439510 REXO2Q9Y3B8 237 aaKnown RBP17.2■□□□□ 0.34
CDC42EP4-202ENST00000439510 MYO1CO00159 1063 aa17.19■□□□□ 0.34
CDC42EP4-202ENST00000439510 BCAMP50895 628 aa17.19■□□□□ 0.34
CDC42EP4-202ENST00000439510 ITPK1Q13572 414 aa17.19■□□□□ 0.34
CDC42EP4-202ENST00000439510 NOM1Q5C9Z4 860 aaKnown RBP17.19■□□□□ 0.34
CDC42EP4-202ENST00000439510 WWC2Q6AWC2 1192 aa17.19■□□□□ 0.34
CDC42EP4-202ENST00000439510 TRAPPC11Q7Z392 1133 aa17.19■□□□□ 0.34
CDC42EP4-202ENST00000439510 CATIPQ7Z7H3 387 aa17.19■□□□□ 0.34
CDC42EP4-202ENST00000439510 SRLQ86TD4 932 aa17.19■□□□□ 0.34
CDC42EP4-202ENST00000439510 STAMQ92783 540 aa17.19■□□□□ 0.34
CDC42EP4-202ENST00000439510 BLZF1Q9H2G9 400 aa17.19■□□□□ 0.34
CDC42EP4-202ENST00000439510 TAB2Q9NYJ8 693 aa17.19■□□□□ 0.34
CDC42EP4-202ENST00000439510 BTAF1O14981 1849 aa17.19■□□□□ 0.34
CDC42EP4-202ENST00000439510 BAZ2AQ9UIF9 1905 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms