RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 SGPP1Q9BX95 441 aa6.1□□□□□ -1.43
HMGB1P31-201ENST00000437242 GCM1Q9NP62 436 aa6.1□□□□□ -1.43
HMGB1P31-201ENST00000437242 KCTD3Q9Y597 815 aa6.1□□□□□ -1.43
HMGB1P31-201ENST00000437242 SORBS3O60504 671 aa6.09□□□□□ -1.43
HMGB1P31-201ENST00000437242 DNAJA2O60884 412 aa6.09□□□□□ -1.43
HMGB1P31-201ENST00000437242 SLC14A2Q15849 920 aa6.09□□□□□ -1.43
HMGB1P31-201ENST00000437242 REC114Q7Z4M0 266 aa6.09□□□□□ -1.43
HMGB1P31-201ENST00000437242 TMEM151BQ8IW70 566 aa6.09□□□□□ -1.43
HMGB1P31-201ENST00000437242 GOLM1Q8NBJ4 401 aa6.09□□□□□ -1.43
HMGB1P31-201ENST00000437242 RSRP1Q9BUV0 290 aa6.09□□□□□ -1.43
HMGB1P31-201ENST00000437242 HDAC8Q9BY41 377 aa6.09□□□□□ -1.43
HMGB1P31-201ENST00000437242 MRS2Q9HD23 443 aa6.09□□□□□ -1.43
HMGB1P31-201ENST00000437242 VTI1BQ9UEU0 232 aa6.09□□□□□ -1.43
HMGB1P31-201ENST00000437242 TIMELESSQ9UNS1 1208 aa6.09□□□□□ -1.43
HMGB1P31-201ENST00000437242 SSU72P8A0A1W2PR75 194 aa6.08□□□□□ -1.44
HMGB1P31-201ENST00000437242 RGS13O14921 159 aa6.08□□□□□ -1.44
HMGB1P31-201ENST00000437242 PCBP3P57721 371 aaKnown RBP6.08□□□□□ -1.44
HMGB1P31-201ENST00000437242 LCE5AQ5TCM9 118 aa6.08□□□□□ -1.44
HMGB1P31-201ENST00000437242 NLRX1Q86UT6 975 aa6.08□□□□□ -1.44
HMGB1P31-201ENST00000437242 MAP6Q96JE9 813 aa6.08□□□□□ -1.44
HMGB1P31-201ENST00000437242 FOXP3Q9BZS1 431 aa6.08□□□□□ -1.44
HMGB1P31-201ENST00000437242 ZNF281Q9Y2X9 895 aa6.08□□□□□ -1.44
HMGB1P31-201ENST00000437242 TLR3O15455 904 aaKnown RBP6.07□□□□□ -1.44
HMGB1P31-201ENST00000437242 RAG1P15918 1043 aa6.07□□□□□ -1.44
HMGB1P31-201ENST00000437242 KIR2DL1P43626 348 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P31-201ENST00000437242 KIR2DL2P43627 348 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P31-201ENST00000437242 SRSF3P84103 164 aaKnown RBP6.07□□□□□ -1.44
HMGB1P31-201ENST00000437242 SSPNQ14714 243 aa6.07□□□□□ -1.44
HMGB1P31-201ENST00000437242 ARSHQ5FYA8 562 aa6.07□□□□□ -1.44
HMGB1P31-201ENST00000437242 CEP128Q6ZU80 1094 aa6.07□□□□□ -1.44
HMGB1P31-201ENST00000437242 DAGLBQ8NCG7 672 aa6.07□□□□□ -1.44
HMGB1P31-201ENST00000437242 FBXO27Q8NI29 283 aa6.07□□□□□ -1.44
HMGB1P31-201ENST00000437242 RELTQ969Z4 430 aa6.07□□□□□ -1.44
HMGB1P31-201ENST00000437242 VWCEQ96DN2 955 aa6.07□□□□□ -1.44
HMGB1P31-201ENST00000437242 TCTN2Q96GX1 697 aa6.07□□□□□ -1.44
HMGB1P31-201ENST00000437242 C20orf173Q96LM9 149 aa6.07□□□□□ -1.44
HMGB1P31-201ENST00000437242 SIRT5Q9NXA8 310 aa6.07□□□□□ -1.44
HMGB1P31-201ENST00000437242 TCFL5Q9UL49 500 aa6.07□□□□□ -1.44
HMGB1P31-201ENST00000437242 IRAK3Q9Y616 596 aa6.07□□□□□ -1.44
HMGB1P31-201ENST00000437242 NOTOA8MTQ0 251 aa6.06□□□□□ -1.44
HMGB1P31-201ENST00000437242 MINDY4BA8MYZ0 360 aa6.06□□□□□ -1.44
HMGB1P31-201ENST00000437242 HRKO00198 91 aa6.06□□□□□ -1.44
HMGB1P31-201ENST00000437242 NRDCO43847 1150 aa6.06□□□□□ -1.44
HMGB1P31-201ENST00000437242 UBOX5O94941 541 aa6.06□□□□□ -1.44
HMGB1P31-201ENST00000437242 PI3P19957 117 aa6.06□□□□□ -1.44
HMGB1P31-201ENST00000437242 ITGAEP38570 1179 aa6.06□□□□□ -1.44
HMGB1P31-201ENST00000437242 CWF19L2Q2TBE0 894 aaKnown RBP6.06□□□□□ -1.44
HMGB1P31-201ENST00000437242 FAM196AQ6ZSG2 479 aa6.06□□□□□ -1.44
HMGB1P31-201ENST00000437242 USHBP1Q8N6Y0 703 aa6.06□□□□□ -1.44
HMGB1P31-201ENST00000437242 ZNF655Q8N720 491 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P31-201ENST00000437242 SIGLEC10Q96LC7 697 aa6.06□□□□□ -1.44
HMGB1P31-201ENST00000437242 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.06□□□□□ -1.44
HMGB1P31-201ENST00000437242 CRTAC1Q9NQ79 661 aa6.06□□□□□ -1.44
HMGB1P31-201ENST00000437242 MBD1Q9UIS9 605 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P31-201ENST00000437242 A0A0G2JLL6 359 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P31-201ENST00000437242 FKTNO75072 461 aa6.05□□□□□ -1.44
HMGB1P31-201ENST00000437242 EFEMP2O95967 443 aa6.05□□□□□ -1.44
HMGB1P31-201ENST00000437242 SYPP08247 313 aa6.05□□□□□ -1.44
HMGB1P31-201ENST00000437242 OLFML2BQ68BL8 750 aa6.05□□□□□ -1.44
HMGB1P31-201ENST00000437242 TMC3Q7Z5M5 1100 aa6.05□□□□□ -1.44
HMGB1P31-201ENST00000437242 HHIPL1Q96JK4 782 aa6.05□□□□□ -1.44
HMGB1P31-201ENST00000437242 KCNC2Q96PR1 638 aa6.05□□□□□ -1.44
HMGB1P31-201ENST00000437242 GMIPQ9P107 970 aa6.05□□□□□ -1.44
HMGB1P31-201ENST00000437242 TMEM82A0PJX8 343 aa6.04□□□□□ -1.44
HMGB1P31-201ENST00000437242 SLC22A31A6NKX4 558 aa6.04□□□□□ -1.44
HMGB1P31-201ENST00000437242 TRIM13O60858 407 aa6.04□□□□□ -1.44
HMGB1P31-201ENST00000437242 GARTP22102 1010 aa6.04□□□□□ -1.44
HMGB1P31-201ENST00000437242 NBPF9Q3BBW0 867 aa6.04□□□□□ -1.44
HMGB1P31-201ENST00000437242 BBS9Q3SYG4 887 aa6.04□□□□□ -1.44
HMGB1P31-201ENST00000437242 FBXO33Q7Z6M2 555 aa6.04□□□□□ -1.44
HMGB1P31-201ENST00000437242 MARCH10Q8NA82 808 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P31-201ENST00000437242 LINC00116Q8NCU8 138 aa6.04□□□□□ -1.44
HMGB1P31-201ENST00000437242 KBTBD4Q9NVX7 518 aa6.04□□□□□ -1.44
HMGB1P31-201ENST00000437242 PCDHB14Q9Y5E9 798 aa6.04□□□□□ -1.44
HMGB1P31-201ENST00000437242 PRAMEF1O95521 474 aa6.03□□□□□ -1.44
HMGB1P31-201ENST00000437242 PNLIPP16233 465 aa6.03□□□□□ -1.44
HMGB1P31-201ENST00000437242 VIPR1P32241 457 aa6.03□□□□□ -1.44
HMGB1P31-201ENST00000437242 EPHB3P54753 998 aa6.03□□□□□ -1.44
HMGB1P31-201ENST00000437242 RAD51AP2Q09MP3 1159 aa6.03□□□□□ -1.44
HMGB1P31-201ENST00000437242 SNW1Q13573 536 aaKnown RBP6.03□□□□□ -1.44
HMGB1P31-201ENST00000437242 NFIXQ14938 502 aa6.03□□□□□ -1.44
HMGB1P31-201ENST00000437242 NBPF12Q5TAG4 269 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P31-201ENST00000437242 OVOS1Q6IE37 1185 aa6.03□□□□□ -1.44
HMGB1P31-201ENST00000437242 DNAJC14Q6Y2X3 702 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P31-201ENST00000437242 FCRL2Q96LA5 508 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P31-201ENST00000437242 LRRC3Q9BY71 257 aa6.03□□□□□ -1.44
HMGB1P31-201ENST00000437242 KRTAP9-3Q9BYQ3 159 aa6.03□□□□□ -1.44
HMGB1P31-201ENST00000437242 KRTAP4-5Q9BYR2 181 aa6.03□□□□□ -1.44
HMGB1P31-201ENST00000437242 BRMS1Q9HCU9 246 aa6.03□□□□□ -1.44
HMGB1P31-201ENST00000437242 TAF6LQ9Y6J9 622 aa6.03□□□□□ -1.44
HMGB1P31-201ENST00000437242 ABLIM1O14639 778 aa6.02□□□□□ -1.45
HMGB1P31-201ENST00000437242 N4BP3O15049 544 aa6.02□□□□□ -1.45
HMGB1P31-201ENST00000437242 FOXD2O60548 495 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P31-201ENST00000437242 SASH1O94885 1247 aa6.02□□□□□ -1.45
HMGB1P31-201ENST00000437242 SDHBP21912 280 aa6.02□□□□□ -1.45
HMGB1P31-201ENST00000437242 POLR2BP30876 1174 aaKnown RBP6.02□□□□□ -1.45
HMGB1P31-201ENST00000437242 AFF3P51826 1226 aaKnown RBP6.02□□□□□ -1.45
HMGB1P31-201ENST00000437242 RTP1P59025 263 aa6.02□□□□□ -1.45
HMGB1P31-201ENST00000437242 ZPBP2Q6X784 338 aa6.02□□□□□ -1.45
HMGB1P31-201ENST00000437242 AEBP1Q8IUX7 1158 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms