RNA–Protein interactions for RNA: ENST00000433165.6

CNKSR3-202, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best)

Gene CNKSR3, Length 2,347 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-202ENST00000433165 TBC1D22AQ8WUA7 517 aa8.73□□□□□ -1.01
CNKSR3-202ENST00000433165 CCDC12Q8WUD4 166 aaPredicted RBP8.73□□□□□ -1.01
CNKSR3-202ENST00000433165 KAT2BQ92831 832 aa8.73□□□□□ -1.01
CNKSR3-202ENST00000433165 NEK1Q96PY6 1258 aa8.73□□□□□ -1.01
CNKSR3-202ENST00000433165 TACO1Q9BSH4 297 aaKnown RBP8.73□□□□□ -1.01
CNKSR3-202ENST00000433165 FAM204AQ9H8W3 233 aa8.73□□□□□ -1.01
CNKSR3-202ENST00000433165 VIPAS39Q9H9C1 493 aa8.73□□□□□ -1.01
CNKSR3-202ENST00000433165 MYOZ2Q9NPC6 264 aa8.73□□□□□ -1.01
CNKSR3-202ENST00000433165 TUBE1Q9UJT0 475 aa8.73□□□□□ -1.01
CNKSR3-202ENST00000433165 CDC23Q9UJX2 597 aa8.73□□□□□ -1.01
CNKSR3-202ENST00000433165 ZBTB12Q9Y330 459 aaPredicted RBP8.73□□□□□ -1.01
CNKSR3-202ENST00000433165 TLL2Q9Y6L7 1015 aa8.73□□□□□ -1.01
CNKSR3-202ENST00000433165 ARAP2Q8WZ64 1704 aa8.73□□□□□ -1.01
CNKSR3-202ENST00000433165 SHOX2O60902 331 aaPredicted RBP8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 WDHD1O75717 1129 aaPredicted RBP8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 ERLIN2O94905 339 aa8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 PRPF6O94906 941 aaKnown RBP8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 SERPINC1P01008 464 aa8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 USP8P40818 1118 aa8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 EPHA10Q5JZY3 1008 aa8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 Q6ZUG5 572 aa8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 TOGARAM2Q6ZUX3 1019 aa8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 APOBEC3FQ8IUX4 373 aaKnown RBP8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 REM2Q8IYK8 340 aaPredicted RBP8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 C2orf69Q8N8R5 385 aa8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 LINC00301Q8NCQ3 95 aa8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 GPR101Q96P66 508 aaPredicted RBP8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 GMLQ99445 158 aa8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 A1CFQ9NQ94 594 aaKnown RBP8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 INTS13Q9NVM9 706 aa8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 SUFUQ9UMX1 484 aa8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 PPP2R3BQ9Y5P8 575 aa8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 MAST3O60307 1309 aa8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 PTPDC1A2A3K4 754 aa8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 TMEM232C9JQI7 657 aa8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 TAF5LO75529 589 aa8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 YEATS4O95619 227 aa8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 SLC5A1P13866 664 aa8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 HIBADHP31937 336 aaKnown RBP8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 MAP2K1Q02750 393 aaPredicted RBP8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 GOLGA8FQ08AF8 430 aa8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 GOLGA8DPQ0D2H9 430 aa8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 PUM3Q15397 648 aaKnown RBP8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 TBC1D10BQ4KMP7 808 aaPredicted RBP8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 KCNV1Q6PIU1 500 aa8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 KRT26Q7Z3Y9 468 aa8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 SLC51AQ86UW1 340 aa8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 TC2NQ8N9U0 490 aa8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 TRPM4Q8TD43 1214 aa8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 KCNG4Q8TDN1 519 aa8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 AFAP1L1Q8TED9 768 aa8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 CCDC102AQ96A19 550 aa8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 SUGCTQ9HAC7 445 aa8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 GNL3LQ9NVN8 582 aaKnown RBP8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 SUGT1Q9Y2Z0 365 aa8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 RIPOR2Q9Y4F9 1068 aa8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 FAM205AQ6ZU69 1335 aa8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 THSD7BQ9C0I4 1608 aa8.72□□□□□ -1.01
CNKSR3-202ENST00000433165 EYA2O00167 538 aa8.71□□□□□ -1.01
CNKSR3-202ENST00000433165 BIN1O00499 593 aa8.71□□□□□ -1.01
CNKSR3-202ENST00000433165 ZNF202O95125 648 aa8.71□□□□□ -1.01
CNKSR3-202ENST00000433165 PDE8BO95263 885 aa8.71□□□□□ -1.01
CNKSR3-202ENST00000433165 CELF2O95319 508 aaKnown RBP8.71□□□□□ -1.01
CNKSR3-202ENST00000433165 HNRNPH1P31943 449 aaKnown RBP8.71□□□□□ -1.01
CNKSR3-202ENST00000433165 IL15P40933 162 aaPredicted RBP8.71□□□□□ -1.01
CNKSR3-202ENST00000433165 VSNL1P62760 191 aa8.71□□□□□ -1.01
CNKSR3-202ENST00000433165 SATB1Q01826 763 aa8.71□□□□□ -1.01
CNKSR3-202ENST00000433165 OS9Q13438 667 aaPredicted RBP8.71□□□□□ -1.01
CNKSR3-202ENST00000433165 ZNF589Q86UQ0 364 aaPredicted RBP8.71□□□□□ -1.01
CNKSR3-202ENST00000433165 MTMR14Q8NCE2 650 aa8.71□□□□□ -1.01
CNKSR3-202ENST00000433165 CTCFLQ8NI51 663 aaPredicted RBP8.71□□□□□ -1.01
CNKSR3-202ENST00000433165 POLR3EQ9NVU0 708 aa8.71□□□□□ -1.01
CNKSR3-202ENST00000433165 SCN9AQ15858 1988 aa8.71□□□□□ -1.01
CNKSR3-202ENST00000433165 LRRIQ3A6PVS8 624 aaPredicted RBP8.71□□□□□ -1.02
CNKSR3-202ENST00000433165 RNF40O75150 1001 aa8.71□□□□□ -1.02
CNKSR3-202ENST00000433165 SASH1O94885 1247 aa8.71□□□□□ -1.02
CNKSR3-202ENST00000433165 SYF2O95926 243 aaKnown RBP8.71□□□□□ -1.02
CNKSR3-202ENST00000433165 GTF2IP78347 998 aa8.71□□□□□ -1.02
CNKSR3-202ENST00000433165 TRDNQ13061 729 aa8.71□□□□□ -1.02
CNKSR3-202ENST00000433165 WWC2Q6AWC2 1192 aa8.71□□□□□ -1.02
CNKSR3-202ENST00000433165 WDR93Q6P2C0 686 aa8.71□□□□□ -1.02
CNKSR3-202ENST00000433165 EP400NLQ6ZTU2 488 aa8.71□□□□□ -1.02
CNKSR3-202ENST00000433165 SAMD7Q7Z3H4 446 aa8.71□□□□□ -1.02
CNKSR3-202ENST00000433165 CNPY4Q8N129 248 aa8.71□□□□□ -1.02
CNKSR3-202ENST00000433165 CEP120Q8N960 986 aa8.71□□□□□ -1.02
CNKSR3-202ENST00000433165 STAG1Q8WVM7 1258 aa8.71□□□□□ -1.02
CNKSR3-202ENST00000433165 LPIN2Q92539 896 aa8.71□□□□□ -1.02
CNKSR3-202ENST00000433165 KAZALD1Q96I82 304 aa8.71□□□□□ -1.02
CNKSR3-202ENST00000433165 BEGAINQ9BUH8 593 aa8.71□□□□□ -1.02
CNKSR3-202ENST00000433165 AGXT2Q9BYV1 514 aa8.71□□□□□ -1.02
CNKSR3-202ENST00000433165 MRPL44Q9H9J2 332 aaKnown RBP8.71□□□□□ -1.02
CNKSR3-202ENST00000433165 ZNF646O15015 1829 aaPredicted RBP8.7□□□□□ -1.02
CNKSR3-202ENST00000433165 SEMA3EO15041 775 aa8.7□□□□□ -1.02
CNKSR3-202ENST00000433165 CA12O43570 354 aa8.7□□□□□ -1.02
CNKSR3-202ENST00000433165 HIRAP54198 1017 aaPredicted RBP8.7□□□□□ -1.02
CNKSR3-202ENST00000433165 SCARF1Q14162 830 aa8.7□□□□□ -1.02
CNKSR3-202ENST00000433165 DLGAP5Q15398 846 aa8.7□□□□□ -1.02
CNKSR3-202ENST00000433165 RBM26Q5T8P6 1007 aaKnown RBP8.7□□□□□ -1.02
CNKSR3-202ENST00000433165 POTEDQ86YR6 584 aa8.7□□□□□ -1.02
CNKSR3-202ENST00000433165 ZNF594Q96JF6 807 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms