RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 ENOX1Q8TC92 643 aaKnown RBP9.94□□□□□ -0.82
GABPB1-205ENST00000429662 ARGLU1Q9NWB6 273 aaPredicted RBP9.94□□□□□ -0.82
GABPB1-205ENST00000429662 TRMT112Q9UI30 125 aaKnown RBP9.94□□□□□ -0.82
GABPB1-205ENST00000429662 HACL1Q9UJ83 578 aa9.94□□□□□ -0.82
GABPB1-205ENST00000429662 ZBTB1Q9Y2K1 713 aa9.94□□□□□ -0.82
GABPB1-205ENST00000429662 LAMA3Q16787 3333 aa9.93□□□□□ -0.82
GABPB1-205ENST00000429662 MROH7-TTC4A0A0A0MT08 1334 aa9.93□□□□□ -0.82
GABPB1-205ENST00000429662 FZD9O00144 591 aa9.93□□□□□ -0.82
GABPB1-205ENST00000429662 TRAF5O00463 557 aa9.93□□□□□ -0.82
GABPB1-205ENST00000429662 BIN1O00499 593 aa9.93□□□□□ -0.82
GABPB1-205ENST00000429662 NUDT7P0C024 238 aa9.93□□□□□ -0.82
GABPB1-205ENST00000429662 PTPREP23469 700 aa9.93□□□□□ -0.82
GABPB1-205ENST00000429662 ERCC5P28715 1186 aaPredicted RBP9.93□□□□□ -0.82
GABPB1-205ENST00000429662 LMOD1P29536 600 aaPredicted RBP9.93□□□□□ -0.82
GABPB1-205ENST00000429662 MAP2K2P36507 400 aa9.93□□□□□ -0.82
GABPB1-205ENST00000429662 NT5C2P49902 561 aa9.93□□□□□ -0.82
GABPB1-205ENST00000429662 TUBB4BP68371 445 aa9.93□□□□□ -0.82
GABPB1-205ENST00000429662 BMS1Q14692 1282 aaKnown RBP9.93□□□□□ -0.82
GABPB1-205ENST00000429662 WTAPQ15007 396 aa9.93□□□□□ -0.82
GABPB1-205ENST00000429662 RTN1Q16799 776 aa9.93□□□□□ -0.82
GABPB1-205ENST00000429662 CFAP100Q494V2 611 aa9.93□□□□□ -0.82
GABPB1-205ENST00000429662 PARP10Q53GL7 1025 aa9.93□□□□□ -0.82
GABPB1-205ENST00000429662 PRR5LQ6MZQ0 368 aa9.93□□□□□ -0.82
GABPB1-205ENST00000429662 MICU3Q86XE3 530 aa9.93□□□□□ -0.82
GABPB1-205ENST00000429662 ZNF34Q8IZ26 560 aa9.93□□□□□ -0.82
GABPB1-205ENST00000429662 CCDC24Q8N4L8 307 aa9.93□□□□□ -0.82
GABPB1-205ENST00000429662 RTL9Q8NET4 1388 aa9.93□□□□□ -0.82
GABPB1-205ENST00000429662 MPHOSPH8Q99549 860 aa9.93□□□□□ -0.82
GABPB1-205ENST00000429662 PYM1Q9BRP8 204 aaKnown RBP9.93□□□□□ -0.82
GABPB1-205ENST00000429662 SLC26A6Q9BXS9 759 aa9.93□□□□□ -0.82
GABPB1-205ENST00000429662 FAM217BQ9NTX9 383 aaPredicted RBP9.93□□□□□ -0.82
GABPB1-205ENST00000429662 FAM53CQ9NYF3 392 aa9.93□□□□□ -0.82
GABPB1-205ENST00000429662 ABT1Q9ULW3 272 aaKnown RBP9.93□□□□□ -0.82
GABPB1-205ENST00000429662 ZNF330Q9Y3S2 320 aaPredicted RBP9.93□□□□□ -0.82
GABPB1-205ENST00000429662 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.93□□□□□ -0.82
GABPB1-205ENST00000429662 MYH7P12883 1935 aa9.92□□□□□ -0.82
GABPB1-205ENST00000429662 UBN2Q6ZU65 1347 aa9.92□□□□□ -0.82
GABPB1-205ENST00000429662 STX10O60499 249 aa9.92□□□□□ -0.82
GABPB1-205ENST00000429662 SRGNP10124 158 aa9.92□□□□□ -0.82
GABPB1-205ENST00000429662 PHKA1P46020 1223 aa9.92□□□□□ -0.82
GABPB1-205ENST00000429662 MDM2Q00987 491 aaPredicted RBP9.92□□□□□ -0.82
GABPB1-205ENST00000429662 POSTNQ15063 836 aa9.92□□□□□ -0.82
GABPB1-205ENST00000429662 HOMER1Q86YM7 354 aa9.92□□□□□ -0.82
GABPB1-205ENST00000429662 ERCC4Q92889 916 aaPredicted RBP9.92□□□□□ -0.82
GABPB1-205ENST00000429662 SMARCE1Q969G3 411 aa9.92□□□□□ -0.82
GABPB1-205ENST00000429662 FBXW7Q969H0 707 aa9.92□□□□□ -0.82
GABPB1-205ENST00000429662 ARID3AQ99856 593 aa9.92□□□□□ -0.82
GABPB1-205ENST00000429662 BRIP1Q9BX63 1249 aa9.92□□□□□ -0.82
GABPB1-205ENST00000429662 ZSWIM5Q9P217 1185 aa9.92□□□□□ -0.82
GABPB1-205ENST00000429662 PCDHA5Q9Y5H7 936 aa9.92□□□□□ -0.82
GABPB1-205ENST00000429662 SRPRBQ9Y5M8 271 aaKnown RBP9.92□□□□□ -0.82
GABPB1-205ENST00000429662 UNC80Q8N2C7 3258 aa9.92□□□□□ -0.82
GABPB1-205ENST00000429662 SEMA3EO15041 775 aa9.91□□□□□ -0.82
GABPB1-205ENST00000429662 RANBP6O60518 1105 aaKnown RBP9.91□□□□□ -0.82
GABPB1-205ENST00000429662 PPFIA3O75145 1194 aa9.91□□□□□ -0.82
GABPB1-205ENST00000429662 SARSP49591 514 aaKnown RBP9.91□□□□□ -0.82
GABPB1-205ENST00000429662 SCNN1DP51172 638 aa9.91□□□□□ -0.82
GABPB1-205ENST00000429662 LSM11P83369 360 aaKnown RBP eCLIP9.91□□□□□ -0.82
GABPB1-205ENST00000429662 AKAP17AQ02040 695 aaKnown RBP9.91□□□□□ -0.82
GABPB1-205ENST00000429662 TBX2Q13207 712 aaPredicted RBP9.91□□□□□ -0.82
GABPB1-205ENST00000429662 PNOCQ13519 176 aa9.91□□□□□ -0.82
GABPB1-205ENST00000429662 TUBB2AQ13885 445 aa9.91□□□□□ -0.82
GABPB1-205ENST00000429662 MORC3Q14149 939 aa9.91□□□□□ -0.82
GABPB1-205ENST00000429662 HLFQ16534 295 aa9.91□□□□□ -0.82
GABPB1-205ENST00000429662 LONRF3Q496Y0 759 aa9.91□□□□□ -0.82
GABPB1-205ENST00000429662 TBC1D9BQ66K14 1250 aa9.91□□□□□ -0.82
GABPB1-205ENST00000429662 PI16Q6UXB8 463 aa9.91□□□□□ -0.82
GABPB1-205ENST00000429662 SYT10Q6XYQ8 523 aa9.91□□□□□ -0.82
GABPB1-205ENST00000429662 SAPCD2Q86UD0 394 aa9.91□□□□□ -0.82
GABPB1-205ENST00000429662 METTL16Q86W50 562 aaKnown RBP9.91□□□□□ -0.82
GABPB1-205ENST00000429662 DZIP3Q86Y13 1208 aaKnown RBP9.91□□□□□ -0.82
GABPB1-205ENST00000429662 DIS3L2Q8IYB7 885 aaKnown RBP9.91□□□□□ -0.82
GABPB1-205ENST00000429662 CRACR2BQ8N4Y2 399 aaPredicted RBP9.91□□□□□ -0.82
GABPB1-205ENST00000429662 MAGEB6Q8N7X4 407 aa9.91□□□□□ -0.82
GABPB1-205ENST00000429662 PHKBQ93100 1093 aa9.91□□□□□ -0.82
GABPB1-205ENST00000429662 CCDC85AQ96PX6 553 aaPredicted RBP9.91□□□□□ -0.82
GABPB1-205ENST00000429662 CDC5LQ99459 802 aaKnown RBP9.91□□□□□ -0.82
GABPB1-205ENST00000429662 TUBB2BQ9BVA1 445 aa9.91□□□□□ -0.82
GABPB1-205ENST00000429662 NAA15Q9BXJ9 866 aaKnown RBP9.91□□□□□ -0.82
GABPB1-205ENST00000429662 RNF26Q9BY78 433 aaPredicted RBP9.91□□□□□ -0.82
GABPB1-205ENST00000429662 HSD3B7Q9H2F3 369 aa9.91□□□□□ -0.82
GABPB1-205ENST00000429662 RBM28Q9NW13 759 aaKnown RBP9.91□□□□□ -0.82
GABPB1-205ENST00000429662 DNAI1Q9UI46 699 aa9.91□□□□□ -0.82
GABPB1-205ENST00000429662 ANAPC4Q9UJX5 808 aa9.91□□□□□ -0.82
GABPB1-205ENST00000429662 RBBP6Q7Z6E9 1792 aaKnown RBP9.9□□□□□ -0.82
GABPB1-205ENST00000429662 A0A087WWV3 80 aa9.9□□□□□ -0.82
GABPB1-205ENST00000429662 GSG1L2A8MUP6 293 aa9.9□□□□□ -0.82
GABPB1-205ENST00000429662 EFCAB8A8MWE9 144 aa9.9□□□□□ -0.82
GABPB1-205ENST00000429662 CA12O43570 354 aa9.9□□□□□ -0.82
GABPB1-205ENST00000429662 IGSF3O75054 1194 aa9.9□□□□□ -0.82
GABPB1-205ENST00000429662 ZPR1O75312 459 aa9.9□□□□□ -0.82
GABPB1-205ENST00000429662 MBD4O95243 580 aa9.9□□□□□ -0.82
GABPB1-205ENST00000429662 CALM1P0DP23 149 aa9.9□□□□□ -0.82
GABPB1-205ENST00000429662 CALM2P0DP24 149 aa9.9□□□□□ -0.82
GABPB1-205ENST00000429662 CALM3P0DP25 149 aa9.9□□□□□ -0.82
GABPB1-205ENST00000429662 H2AFXP16104 143 aaPredicted RBP9.9□□□□□ -0.82
GABPB1-205ENST00000429662 CDK11BP21127 795 aaKnown RBP9.9□□□□□ -0.82
GABPB1-205ENST00000429662 GPTP24298 496 aa9.9□□□□□ -0.82
GABPB1-205ENST00000429662 IGHMBP2P38935 993 aaKnown RBP9.9□□□□□ -0.82
GABPB1-205ENST00000429662 ECE1P42892 770 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms