RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 NYAP2Q9P242 653 aa19.61■□□□□ 0.73
CALD1-204ENST00000417172 U2AF2P26368 475 aaKnown RBP eCLIP19.61■□□□□ 0.738e-8■□□□□ 10.4
CALD1-204ENST00000417172 SKOR2Q2VWA4 1001 aaPredicted RBP19.61■□□□□ 0.73
CALD1-204ENST00000417172 NBPF12Q5TAG4 269 aaPredicted RBP19.61■□□□□ 0.73
CALD1-204ENST00000417172 TYW1BQ6NUM6 668 aa19.61■□□□□ 0.73
CALD1-204ENST00000417172 BRAPQ7Z569 592 aa19.61■□□□□ 0.73
CALD1-204ENST00000417172 HOMER1Q86YM7 354 aa19.61■□□□□ 0.73
CALD1-204ENST00000417172 PHF20Q9BVI0 1012 aa19.61■□□□□ 0.73
CALD1-204ENST00000417172 CABP5Q9NP86 173 aa19.61■□□□□ 0.73
CALD1-204ENST00000417172 ZBTB21Q9ULJ3 1066 aa19.61■□□□□ 0.73
CALD1-204ENST00000417172 FZD1Q9UP38 647 aa19.61■□□□□ 0.73
CALD1-204ENST00000417172 TBC1D12O60347 775 aa19.6■□□□□ 0.73
CALD1-204ENST00000417172 ECE1P42892 770 aa19.6■□□□□ 0.73
CALD1-204ENST00000417172 ZNF543Q08ER8 600 aa19.6■□□□□ 0.73
CALD1-204ENST00000417172 NPY5RQ15761 445 aa19.6■□□□□ 0.73
CALD1-204ENST00000417172 CCDC96Q2M329 555 aa19.6■□□□□ 0.73
CALD1-204ENST00000417172 CAVIN1Q6NZI2 390 aaKnown RBP19.6■□□□□ 0.73
CALD1-204ENST00000417172 MKL1Q969V6 931 aa19.6■□□□□ 0.73
CALD1-204ENST00000417172 SPZ1Q9BXG8 430 aa19.6■□□□□ 0.73
CALD1-204ENST00000417172 ISY1Q9ULR0 285 aaKnown RBP19.6■□□□□ 0.73
CALD1-204ENST00000417172 CLIC4Q9Y696 253 aa19.6■□□□□ 0.73
CALD1-204ENST00000417172 FAM205CA6NFA0 338 aa19.59■□□□□ 0.73
CALD1-204ENST00000417172 SLC16A2P36021 539 aa19.59■□□□□ 0.73
CALD1-204ENST00000417172 NOM1Q5C9Z4 860 aaKnown RBP19.59■□□□□ 0.73
CALD1-204ENST00000417172 WWC2Q6AWC2 1192 aa19.59■□□□□ 0.73
CALD1-204ENST00000417172 RGS22Q8NE09 1264 aa19.59■□□□□ 0.73
CALD1-204ENST00000417172 ACER1Q8TDN7 264 aa19.59■□□□□ 0.73
CALD1-204ENST00000417172 NUP88Q99567 741 aaPredicted RBP19.59■□□□□ 0.73
CALD1-204ENST00000417172 SCAND2PQ9GZW5 306 aaPredicted RBP19.59■□□□□ 0.73
CALD1-204ENST00000417172 ASPRV1Q53RT3 343 aa19.59■□□□□ 0.73
CALD1-204ENST00000417172 DLK2Q6UY11 383 aa19.59■□□□□ 0.73
CALD1-204ENST00000417172 PIGSQ96S52 555 aa19.59■□□□□ 0.73
CALD1-204ENST00000417172 PHF20L1A8MW92 1017 aa19.58■□□□□ 0.72
CALD1-204ENST00000417172 CAP2P40123 477 aa19.58■□□□□ 0.72
CALD1-204ENST00000417172 MAP3K10Q02779 954 aa19.58■□□□□ 0.72
CALD1-204ENST00000417172 SAFBQ15424 915 aaKnown RBP eCLIP19.58■□□□□ 0.72
CALD1-204ENST00000417172 EARS2Q5JPH6 523 aaKnown RBP19.58■□□□□ 0.72
CALD1-204ENST00000417172 HEATR3Q7Z4Q2 680 aa19.58■□□□□ 0.72
CALD1-204ENST00000417172 NOSTRINQ8IVI9 506 aa19.58■□□□□ 0.72
CALD1-204ENST00000417172 PGBD1Q96JS3 809 aa19.58■□□□□ 0.72
CALD1-204ENST00000417172 ZNF396Q96N95 335 aaPredicted RBP19.58■□□□□ 0.72
CALD1-204ENST00000417172 LZTS2Q9BRK4 669 aa19.58■□□□□ 0.72
CALD1-204ENST00000417172 GLIS2Q9BZE0 524 aaPredicted RBP19.58■□□□□ 0.72
CALD1-204ENST00000417172 CFAP45Q9UL16 551 aa19.58■□□□□ 0.72
CALD1-204ENST00000417172 ELP1O95163 1332 aa19.57■□□□□ 0.72
CALD1-204ENST00000417172 XBP1P17861 261 aa19.57■□□□□ 0.72
CALD1-204ENST00000417172 UBE2HP62256 183 aa19.57■□□□□ 0.72
CALD1-204ENST00000417172 KIAA1755Q5JYT7 1200 aa19.57■□□□□ 0.72
CALD1-204ENST00000417172 SLFN13Q68D06 897 aa19.57■□□□□ 0.72
CALD1-204ENST00000417172 SPICE1Q8N0Z3 855 aa19.57■□□□□ 0.72
CALD1-204ENST00000417172 F5H6K3 240 aa19.57■□□□□ 0.72
CALD1-204ENST00000417172 NDUFB10O96000 172 aa19.57■□□□□ 0.72
CALD1-204ENST00000417172 KLRC3Q07444 240 aa19.57■□□□□ 0.72
CALD1-204ENST00000417172 RIOX1Q9H6W3 641 aa19.57■□□□□ 0.72
CALD1-204ENST00000417172 TMEM63CQ9P1W3 806 aa19.57■□□□□ 0.72
CALD1-204ENST00000417172 STXBP3O00186 592 aa19.56■□□□□ 0.72
CALD1-204ENST00000417172 KRT2P35908 639 aa19.56■□□□□ 0.72
CALD1-204ENST00000417172 SLC1A4P43007 532 aa19.56■□□□□ 0.72
CALD1-204ENST00000417172 NLRP5P59047 1200 aa19.56■□□□□ 0.72
CALD1-204ENST00000417172 CSPP1Q1MSJ5 1256 aa19.56■□□□□ 0.72
CALD1-204ENST00000417172 PPP4R3BQ5MIZ7 849 aa19.56■□□□□ 0.72
CALD1-204ENST00000417172 ADGRF4Q8IZF3 695 aa19.56■□□□□ 0.72
CALD1-204ENST00000417172 FOXP1Q9H334 677 aaPredicted RBP19.56■□□□□ 0.72
CALD1-204ENST00000417172 LMOD1P29536 600 aaPredicted RBP19.55■□□□□ 0.72
CALD1-204ENST00000417172 TOB1P50616 345 aaPredicted RBP19.55■□□□□ 0.72
CALD1-204ENST00000417172 ZYXQ15942 572 aaKnown RBP19.55■□□□□ 0.72
CALD1-204ENST00000417172 APOBEC3FQ8IUX4 373 aaKnown RBP19.55■□□□□ 0.72
CALD1-204ENST00000417172 RRP36Q96EU6 259 aaKnown RBP19.55■□□□□ 0.72
CALD1-204ENST00000417172 RTEL1Q9NZ71 1219 aa19.55■□□□□ 0.72
CALD1-204ENST00000417172 RCOR1Q9UKL0 485 aa19.55■□□□□ 0.72
CALD1-204ENST00000417172 DOCK1Q14185 1865 aa19.55■□□□□ 0.72
CALD1-204ENST00000417172 SSC5DA1L4H1 1573 aa19.55■□□□□ 0.72
CALD1-204ENST00000417172 USP17L10C9JJH3 530 aa19.55■□□□□ 0.72
CALD1-204ENST00000417172 MBD3O95983 291 aa19.55■□□□□ 0.72
CALD1-204ENST00000417172 JMJD4Q9H9V9 463 aa19.55■□□□□ 0.72
CALD1-204ENST00000417172 INPP5BP32019 993 aa19.54■□□□□ 0.72
CALD1-204ENST00000417172 SF3A1Q15459 793 aaKnown RBP19.54■□□□□ 0.72
CALD1-204ENST00000417172 GPATCH4Q5T3I0 446 aaKnown RBP19.54■□□□□ 0.72
CALD1-204ENST00000417172 ANO1Q5XXA6 986 aa19.54■□□□□ 0.72
CALD1-204ENST00000417172 LINC00301Q8NCQ3 95 aa19.54■□□□□ 0.72
CALD1-204ENST00000417172 GMCL1P1Q8NEA9 526 aa19.54■□□□□ 0.72
CALD1-204ENST00000417172 RASGRP4Q8TDF6 673 aa19.54■□□□□ 0.72
CALD1-204ENST00000417172 TNFRSF25Q93038 417 aa19.54■□□□□ 0.72
CALD1-204ENST00000417172 ADARB2Q9NS39 739 aaKnown RBP19.54■□□□□ 0.72
CALD1-204ENST00000417172 BARHL2Q9NY43 387 aa19.54■□□□□ 0.72
CALD1-204ENST00000417172 WNT7AO00755 349 aa19.53■□□□□ 0.72
CALD1-204ENST00000417172 SMARCA1P28370 1054 aa19.53■□□□□ 0.72
CALD1-204ENST00000417172 ATL3Q6DD88 541 aa19.53■□□□□ 0.72
CALD1-204ENST00000417172 DCAF4Q8WV16 495 aa19.53■□□□□ 0.72
CALD1-204ENST00000417172 ARHGEF10LQ9HCE6 1279 aa19.53■□□□□ 0.72
CALD1-204ENST00000417172 POLR3EQ9NVU0 708 aa19.53■□□□□ 0.72
CALD1-204ENST00000417172 SEC63Q9UGP8 760 aaKnown RBP19.53■□□□□ 0.72
CALD1-204ENST00000417172 PPP1R11O60927 126 aaPredicted RBP19.53■□□□□ 0.72
CALD1-204ENST00000417172 LIG1P18858 919 aa19.53■□□□□ 0.72
CALD1-204ENST00000417172 ATP2B1P20020 1258 aa19.53■□□□□ 0.72
CALD1-204ENST00000417172 NASPP49321 788 aaPredicted RBP19.53■□□□□ 0.72
CALD1-204ENST00000417172 SNAP25P60880 206 aa19.53■□□□□ 0.72
CALD1-204ENST00000417172 GSE1Q14687 1217 aa19.53■□□□□ 0.72
CALD1-204ENST00000417172 COA7Q96BR5 231 aa19.53■□□□□ 0.72
CALD1-204ENST00000417172 TMX2Q9Y320 296 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms