RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 HAUS3Q68CZ6 603 aa13.28□□□□□ -0.28
UBR4-205ENST00000417040 SRGAP1Q7Z6B7 1085 aa13.28□□□□□ -0.28
UBR4-205ENST00000417040 GPKOWQ92917 476 aaPredicted RBP eCLIP13.28□□□□□ -0.286e-7■■■■□ 19.3
UBR4-205ENST00000417040 IFNB1P01574 187 aa13.27□□□□□ -0.28
UBR4-205ENST00000417040 ARID5BQ14865 1188 aa13.27□□□□□ -0.28
UBR4-205ENST00000417040 TPH2Q8IWU9 490 aa13.27□□□□□ -0.28
UBR4-205ENST00000417040 BLMP54132 1417 aaPredicted RBP13.27□□□□□ -0.28
UBR4-205ENST00000417040 SMTNP53814 917 aa13.27□□□□□ -0.28
UBR4-205ENST00000417040 SPATA5Q8NB90 893 aa13.27□□□□□ -0.28
UBR4-205ENST00000417040 HAUS7Q99871 368 aa13.27□□□□□ -0.28
UBR4-205ENST00000417040 ZSWIM6Q9HCJ5 1215 aa13.27□□□□□ -0.28
UBR4-205ENST00000417040 SYCP2Q9BX26 1530 aa13.27□□□□□ -0.28
UBR4-205ENST00000417040 THAP12O43422 761 aa13.27□□□□□ -0.29
UBR4-205ENST00000417040 STRN3Q13033 797 aa13.27□□□□□ -0.29
UBR4-205ENST00000417040 LLGL1Q15334 1064 aa13.27□□□□□ -0.29
UBR4-205ENST00000417040 SYMPKQ92797 1274 aaKnown RBP13.27□□□□□ -0.29
UBR4-205ENST00000417040 COL17A1Q9UMD9 1497 aaPredicted RBP13.27□□□□□ -0.29
UBR4-205ENST00000417040 SERPINB6P35237 376 aa13.27□□□□□ -0.29
UBR4-205ENST00000417040 HNRNPH2P55795 449 aaKnown RBP13.27□□□□□ -0.29
UBR4-205ENST00000417040 PLBD2Q8NHP8 589 aa13.27□□□□□ -0.29
UBR4-205ENST00000417040 MRFAP1L1Q96HT8 127 aa13.27□□□□□ -0.29
UBR4-205ENST00000417040 HDAC9Q9UKV0 1011 aa13.27□□□□□ -0.29
UBR4-205ENST00000417040 A1BGP04217 495 aa13.27□□□□□ -0.29
UBR4-205ENST00000417040 CFAP61Q8NHU2 1237 aa13.27□□□□□ -0.29
UBR4-205ENST00000417040 PARD6BQ9BYG5 372 aa13.27□□□□□ -0.29
UBR4-205ENST00000417040 ZFYVE9O95405 1425 aa13.26□□□□□ -0.29
UBR4-205ENST00000417040 MAP3K19Q56UN5 1328 aa13.26□□□□□ -0.29
UBR4-205ENST00000417040 BCRP11274 1271 aa13.26□□□□□ -0.29
UBR4-205ENST00000417040 ZKSCAN8Q15776 578 aaPredicted RBP13.26□□□□□ -0.29
UBR4-205ENST00000417040 UNC5CLQ8IV45 518 aa13.26□□□□□ -0.29
UBR4-205ENST00000417040 GRM1Q13255 1194 aa13.26□□□□□ -0.29
UBR4-205ENST00000417040 MAP7Q14244 749 aa13.26□□□□□ -0.29
UBR4-205ENST00000417040 AP1ARQ63HQ0 302 aa13.26□□□□□ -0.29
UBR4-205ENST00000417040 NOSTRINQ8IVI9 506 aa13.26□□□□□ -0.29
UBR4-205ENST00000417040 MAPKAPK5Q8IW41 473 aa13.26□□□□□ -0.29
UBR4-205ENST00000417040 RSAD2Q8WXG1 361 aa13.26□□□□□ -0.29
UBR4-205ENST00000417040 CCDC51Q96ER9 411 aa13.26□□□□□ -0.29
UBR4-205ENST00000417040 MOCS3O95396 460 aa13.26□□□□□ -0.29
UBR4-205ENST00000417040 RPN1P04843 607 aaKnown RBP13.26□□□□□ -0.29
UBR4-205ENST00000417040 TGFBRAP1Q8WUH2 860 aa13.26□□□□□ -0.29
UBR4-205ENST00000417040 EPN1Q9Y6I3 576 aaPredicted RBP13.26□□□□□ -0.29
UBR4-205ENST00000417040 SLC8A1P32418 973 aa13.26□□□□□ -0.29
UBR4-205ENST00000417040 RASIP1Q5U651 963 aa13.26□□□□□ -0.29
UBR4-205ENST00000417040 MORC4Q8TE76 937 aa13.26□□□□□ -0.29
UBR4-205ENST00000417040 EPB41L5Q9HCM4 733 aa13.26□□□□□ -0.29
UBR4-205ENST00000417040 NUP160Q12769 1436 aa13.26□□□□□ -0.29
UBR4-205ENST00000417040 SAT1P21673 171 aa13.26□□□□□ -0.29
UBR4-205ENST00000417040 CDC25BP30305 580 aa13.26□□□□□ -0.29
UBR4-205ENST00000417040 NCBP1Q09161 790 aaKnown RBP13.26□□□□□ -0.29
UBR4-205ENST00000417040 GPBP1Q86WP2 473 aa13.26□□□□□ -0.29
UBR4-205ENST00000417040 ERBB4Q15303 1308 aa13.25□□□□□ -0.29
UBR4-205ENST00000417040 POC1B-GALNT4F8VUJ3 575 aa13.25□□□□□ -0.29
UBR4-205ENST00000417040 GOLGA8HP0CJ92 632 aa13.25□□□□□ -0.29
UBR4-205ENST00000417040 ATF7P17544 494 aaPredicted RBP13.25□□□□□ -0.29
UBR4-205ENST00000417040 GABPAQ06546 454 aa13.25□□□□□ -0.29
UBR4-205ENST00000417040 TCP10Q12799 353 aa13.25□□□□□ -0.29
UBR4-205ENST00000417040 ZNF790Q6PG37 636 aa13.25□□□□□ -0.29
UBR4-205ENST00000417040 MED4Q9NPJ6 270 aa13.25□□□□□ -0.29
UBR4-205ENST00000417040 PARP2Q9UGN5 583 aa13.25□□□□□ -0.29
UBR4-205ENST00000417040 HIBADHP31937 336 aaKnown RBP13.25□□□□□ -0.29
UBR4-205ENST00000417040 SNX1Q13596 522 aa13.25□□□□□ -0.29
UBR4-205ENST00000417040 GDAP1Q8TB36 358 aa13.25□□□□□ -0.29
UBR4-205ENST00000417040 PANK4Q9NVE7 773 aa13.25□□□□□ -0.29
UBR4-205ENST00000417040 GINS2Q9Y248 185 aa13.25□□□□□ -0.29
UBR4-205ENST00000417040 SMCO2A6NFE2 343 aa13.25□□□□□ -0.29
UBR4-205ENST00000417040 DCAF8L1A6NGE4 600 aa13.25□□□□□ -0.29
UBR4-205ENST00000417040 RCN2Q14257 317 aa13.25□□□□□ -0.29
UBR4-205ENST00000417040 FBXO38Q6PIJ6 1188 aa13.25□□□□□ -0.29
UBR4-205ENST00000417040 OGFOD1Q8N543 542 aa13.25□□□□□ -0.29
UBR4-205ENST00000417040 RGS12O14924 1447 aa13.25□□□□□ -0.29
UBR4-205ENST00000417040 BTBD18B2RXH4 712 aa13.25□□□□□ -0.29
UBR4-205ENST00000417040 PFKFB2O60825 505 aa13.25□□□□□ -0.29
UBR4-205ENST00000417040 PPARAQ07869 468 aa13.25□□□□□ -0.29
UBR4-205ENST00000417040 KIF22Q14807 665 aa13.25□□□□□ -0.29
UBR4-205ENST00000417040 RASEFQ8IZ41 740 aa13.25□□□□□ -0.29
UBR4-205ENST00000417040 SDR42E1Q8WUS8 393 aa13.25□□□□□ -0.29
UBR4-205ENST00000417040 NAP1L4Q99733 375 aaKnown RBP13.25□□□□□ -0.29
UBR4-205ENST00000417040 ZC3H12CQ9C0D7 883 aaKnown RBP13.25□□□□□ -0.29
UBR4-205ENST00000417040 INTUQ9ULD6 942 aa13.25□□□□□ -0.29
UBR4-205ENST00000417040 ADCY9O60503 1353 aa13.25□□□□□ -0.29
UBR4-205ENST00000417040 CD19P15391 556 aa13.25□□□□□ -0.29
UBR4-205ENST00000417040 PLCG2P16885 1265 aa13.25□□□□□ -0.29
UBR4-205ENST00000417040 TRAF1Q13077 416 aa13.25□□□□□ -0.29
UBR4-205ENST00000417040 N4BP2L2Q92802 583 aaPredicted RBP13.25□□□□□ -0.29
UBR4-205ENST00000417040 COPB1P53618 953 aaKnown RBP13.24□□□□□ -0.29
UBR4-205ENST00000417040 KRT25Q7Z3Z0 450 aa13.24□□□□□ -0.29
UBR4-205ENST00000417040 RPGRIP1Q96KN7 1286 aa13.24□□□□□ -0.29
UBR4-205ENST00000417040 NYXQ9GZU5 481 aa13.24□□□□□ -0.29
UBR4-205ENST00000417040 SEPT10Q9P0V9 454 aa13.24□□□□□ -0.29
UBR4-205ENST00000417040 CDC23Q9UJX2 597 aa13.24□□□□□ -0.29
UBR4-205ENST00000417040 CHL1O00533 1208 aa13.24□□□□□ -0.29
UBR4-205ENST00000417040 CMA1P23946 247 aa13.24□□□□□ -0.29
UBR4-205ENST00000417040 SLCO1A2P46721 670 aa13.24□□□□□ -0.29
UBR4-205ENST00000417040 ZNF654Q8IZM8 581 aa13.24□□□□□ -0.29
UBR4-205ENST00000417040 ABTB1Q969K4 478 aaPredicted RBP13.24□□□□□ -0.29
UBR4-205ENST00000417040 DSCC1Q9BVC3 393 aa13.24□□□□□ -0.29
UBR4-205ENST00000417040 EIF4E1BA6NMX2 242 aaKnown RBP13.24□□□□□ -0.29
UBR4-205ENST00000417040 UFL1O94874 794 aa13.24□□□□□ -0.29
UBR4-205ENST00000417040 TFAP4Q01664 338 aa13.24□□□□□ -0.29
UBR4-205ENST00000417040 ZMYM6O95789 1325 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms